Carlos-Francisco Méndez-Cruz / salmonella-trn

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STM Transcriptional regulatory network

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1 # _Salmonella enterica_ serovar Typhimurium transcriptional regulatory network 1 # _Salmonella enterica_ serovar Typhimurium transcriptional regulatory network
2 Reconstructed from 4,601 scientific article with Natural language processing 2 Reconstructed from 4,601 scientific article with Natural language processing
3 3
4 -## Transcriptional regulatory network 4 +## Regulatory interactions with organism annotations and meta-knowledge classification
5 -### Regulatory interactions with organism annotations and meta-knowledge classification
6 5
7 - [trn/STMTRN_detail_org_meta.tsv](http://pakal.ccg.unam.mx/cmendezc/salmonella-trn/blob/master/trn/STMTRN_detail_org_meta.tsv) 6 - [trn/STMTRN_detail_org_meta.tsv](http://pakal.ccg.unam.mx/cmendezc/salmonella-trn/blob/master/trn/STMTRN_detail_org_meta.tsv)
8 7
9 -### Final regulatory interactions 8 +## Transcriptional regulatory network
10 Regulatory interactions from other organisms are discarded. 9 Regulatory interactions from other organisms are discarded.
11 10
11 +Total de RIs: 2,542.
12 +
13 +Total de RIs por efecto:
14 +- activator 992
15 +- regulator 1,071
16 +- repressor 479
17 +
18 +Total de RIs por tipo de regulado:
19 +- TU 172
20 +- gene 2,370
21 +
22 +Total de frases: 10,449.
23 +
12 - [trn/STMTRN_summary_org_meta.tsv](http://pakal.ccg.unam.mx/cmendezc/salmonella-trn/blob/master/trn/STMTRN_summary_org_meta.tsv) 24 - [trn/STMTRN_summary_org_meta.tsv](http://pakal.ccg.unam.mx/cmendezc/salmonella-trn/blob/master/trn/STMTRN_summary_org_meta.tsv)
13 25
26 +
14 ## Contact 27 ## Contact
15 Please send mail to cmendezc@ccg.unam.mx 28 Please send mail to cmendezc@ccg.unam.mx
16 29
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