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Carlos-Francisco Méndez-Cruz
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salmonella-trn
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Authored by
cmendezc
2022-03-22 06:00:52 -0600
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STM Transcriptional regulatory network
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README.md
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# _Salmonella enterica_ serovar Typhimurium transcriptional regulatory network
Reconstructed from 4,601 scientific article with Natural language processing
## Transcriptional regulatory network
### Regulatory interactions with organism annotations and meta-knowledge classification
## Regulatory interactions with organism annotations and meta-knowledge classification
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[
trn/STMTRN_detail_org_meta.tsv
](
http://pakal.ccg.unam.mx/cmendezc/salmonella-trn/blob/master/trn/STMTRN_detail_org_meta.tsv
)
##
# Final regulatory interactions
##
Transcriptional regulatory network
Regulatory interactions from other organisms are discarded.
Total de RIs: 2,542.
Total de RIs por efecto:
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activator 992
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regulator 1,071
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repressor 479
Total de RIs por tipo de regulado:
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TU 172
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gene 2,370
Total de frases: 10,449.
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[
trn/STMTRN_summary_org_meta.tsv
](
http://pakal.ccg.unam.mx/cmendezc/salmonella-trn/blob/master/trn/STMTRN_summary_org_meta.tsv
)
## Contact
Please send mail to cmendezc@ccg.unam.mx
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