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/
gene-disease-embeddings
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Authored by
Larisa Morales Soto
2018-03-28 22:55:21 -0600
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scripts/commands.sh
scripts/commands.sh
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a0dd90c
# Retrieve titles
grep -E
"
\|
t
\|
"
title-sentences.txt | perl -ne
'if(/(\d+\|t\|)(.*)/){print "$2\n"}'
> abstracts-titles.txt
# Run wisse
python3.4 wisse_example.py --input ../corpora/abstracts-titles.txt --idfmodel
local
--embedmodel /export/space1/users/compu2/bionlp/word-embeddings/w2v/almac/ignacio/data/word2vec/indexed_w2v_En_vector_space_H300 --localw binary --output ../embeddings/abstracts-titles.vec --format wisse &
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