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larisa
/
gene-disease-embeddings
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Authored by
larisa
2018-04-15 08:37:10 -0500
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81a87e9bacab9c371740a6b97577c06d3b05811b
81a87e9b
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scripts/commands.sh
scripts/commands.sh
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@@ -5,3 +5,8 @@ grep -E "\|t\|" ../corpora/full-sentences.txt | perl -ne 'if(/(\d+\|t\|)(.*)/){p
# Run wisse
python3.4 wisse_example.py --input ../corpora/articles-titles.txt --idfmodel
local
--embedmodel /export/space1/users/compu2/bionlp/word-embeddings/w2v/almac/ignacio/data/word2vec/indexed_w2v_En_vector_space_H300 --localw binary --output ../embeddings/articles-titles.vec --format wisse &
# Within cluster sentence analysis
grep -c -E
'<g>.*<d>|<d>.*<g>'
cluster1_tagged.txt cluster2_tagged.txt cluster3_tagged.txt cluster4_tagged.txt
wc -l cluster1_tagged.txt cluster2_tagged.txt cluster3_tagged.txt cluster4_tagged.txt
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