Larisa Morales Soto

files

1 -# missing word embeddings:
2 -29c
3 -14
4 -31
5 -26a
6 -beta1
7 -486
8 -profibrotic
9 -92a
10 -29a
11 -matricellular
12 -155
13 -13
14 -b1
15 -etiopathology
16 -nexin
17 -avb6
18 -21
19 -19
20 -acetylglucosaminidase
21 -326
22 -dermatan
23 -1b
24 -p38
25 -47
26 -68
27 -3p
28 -dedifferentiating
29 -alpha3beta1
30 -chymase
31 -2alpha
32 -90
33 -7d
34 -5100
35 -18a
36 -1a
37 -alpha3
38 -150
39 -1343
40 -140
41 -541
42 -fibrogenesis
43 -221
44 -mitophagy
45 -b4
46 -p63
47 -10
48 -5p
49 -haptotactic
50 -nonkinase
51 -farnesoid
52 -lymphopoietin
53 -7a
54 -18
55 -338
56 -1beta
57 -424
58 -199a
59 -154
60 -smad2
61 -17
62 -185
63 -bronchoalveolar
64 -101
65 -profibrogenic
66 -153
67 -gambogic
68 -ubiquitinating
69 -p110y
70 -200
71 -323a
72 -196a
73 -dysregulates
74 -fibrogenic
75 -salvianolic
76 -# missing MI weights:
77 -Tumor
78 -sTNFR
79 -Compromised
80 -Modulating
81 -Renin
82 -Invasive
83 -Cytokine
84 -D1
85 -C3aR
86 -Prostaglandin
87 -Diagnostic
88 -HLA
89 -Interstitial
90 -Transforming
91 -Phenotypes
92 -Up
93 -Clinical
94 -TGFb
95 -Interplay
96 -Animal
97 -Decoction
98 -Foxp3high
99 -Leucine
100 -CCL2
101 -SDKP
102 -IL
103 -Correct
104 -Elk1
105 -Participation
106 -Azithromycin
107 -Amplification
108 -1A
109 -Endothelin
110 -Kinase
111 -Possible
112 -Associated
113 -MicroRNA
114 -sL1
115 -Action
116 -For
117 -Development
118 -Establishment
119 -Extracellular
120 -Epstein
121 -MUM
122 -Serine
123 -Interactions
124 -Macrophage
125 -Pseudomonas
126 -Cytokines
127 -IGFBP
128 -Calu
129 -PI3K
130 -B4
131 -Chinese
132 -Cigarette
133 -BALF
134 -NK
135 -alphaEbeta7
136 -microRNAs
137 -Gene
138 -True
139 -Pneumonia
140 -CUX1
141 -miRNA
142 -Ubiquitin
143 -Wnt
144 -CDCP1
145 -Barr
146 -ORP150
147 -Curcumin
148 -aB
149 -Myofibroblast
150 -JNK
151 -Aortic
152 -L5
153 -Hsp90
154 -Smoke
155 -IFN
156 -Reactive
157 -Significance
158 -aVb6
159 -Th2
160 -Constitutive
161 -Melatonin
162 -Mediates
163 -AP
164 -Lindau
165 -ALK5
166 -AKT2
167 -EMT
168 -Reversion
169 -Patients
170 -Solution
171 -Focal
172 -Immunoglobulin
173 -RhoA
174 -Neutrophil
175 -BMPR2
176 -CXCL9
177 -Lower
178 -Olodaterol
179 -Lavage
180 -Induces
181 -Induced
182 -Beyond
183 -MMP
184 -Fstl1
185 -cAMP
186 -Aging
187 -SPARC
188 -Activity
189 -ECM
190 -Human
191 -Fibrotic
192 -Repression
193 -Prostatic
194 -NOX4
195 -Against
196 -Discovery
197 -Resveratrol
198 -Interleukin
199 -Deleted
200 -Differentiation
201 -Spiruchostatin
202 -Insulin
203 -PXS64
204 -MCTC
205 -HP
206 -Triptolide
207 -Values
208 -Differential
209 -Lysyl
210 -FGF
211 -Promote
212 -Yin
213 -Tissue
214 -BMP
215 -CAM
216 -Discoidin
217 -Overproduction
218 -Wilms
219 -Regulates
220 -Reduced
221 -Mesenchymal
222 -Inflammation
223 -PINK1
224 -Release
225 -E2
226 -CD44V6
227 -TGFbeta1
228 -Rg1
229 -H441
230 -kDa
231 -M2
232 -Expression
233 -Data
234 -Contribution
235 -Negative
236 -Nintedanib
237 -Pulmonary
238 -Emphysema
239 -Intrinsic
240 -17A
241 -Marks
242 -26S
243 -RXFP1
244 -Neovessel
245 -Genetic
246 -Protective
247 -Tensin
248 -Inducer
249 -Like
250 -Determining
251 -Increased
252 -Microsatellite
253 -Sphingosine
254 -TRPV4
255 -Club
256 -Methylation
257 -Phenoconversion
258 -Serpin
259 -Activated
260 -Muc5ac
261 -MyD88
262 -Glucagon
263 -IPF
264 -SIRT6
265 -Rapamycin
266 -Essential
267 -TNFalpha
268 -Corilagin
269 -Sorafenib
270 -Epithelial
271 -T869C
272 -Induction
273 -Long
274 -Wt1
275 -Molecules
276 -TGFBR2
277 -P110
278 -Nuclear
279 -Old
280 -Targeting
281 -WNT7B
282 -Thy
283 -Potential
284 -TGF
285 -Tubastatin
286 -Semaphorin
287 -Attenuating
288 -Smad
289 -Pigment
290 -Homolog
291 -Binding
292 -microRNA
293 -C57BL
294 -Regulating
295 -Implications
296 -Hydrogen
297 -BARD1
298 -A549
299 -Homeostasis
300 -Selectivity
301 -Medical
302 -Model
303 -Cytoskeletal
304 -Differing
305 -BMP3
306 -Enhances
307 -NADPH
308 -Fibrogenesis
309 -Defect
310 -Two
311 -FAK
312 -RNA
313 -Quantifying
314 -Epigenetic
315 -Profibrotic
316 -Ambroxol
317 -Trigger
318 -Titration
319 -Transcription
320 -Regulation
321 -Mitochondrial
322 -H1N1
323 -Recent
324 -BMPER
325 -PPARs
326 -VCAM
327 -Microsomal
328 -Hippel
329 -Renshen
330 -Absence
331 -Anchorage
332 -Applying
333 -Free
334 -OSF
335 -PGE
336 -Tannic
337 -Plasminogen
338 -TGFBR
339 -Channel
340 -Age
341 -Cell
342 -Connective
343 -Proteasomal
344 -RAGE
345 -Bach1
346 -Pirfenidone
347 -Outcomes
348 -GATA
349 -Small
350 -Autoimmunity
351 -III
352 -VEGF
353 -Control
354 -HSP27
355 -Cartilage
356 -Periostin
357 -Idiopathic
358 -COL1A1
359 -CBP
360 -Bronchoalveolar
361 -Crosstalk
362 -Amplified
363 -Evidence
364 -Simvastatin
365 -Sphingolipids
366 -Mechanisms
367 -JAK2
368 -Rats
369 -Mice
370 -Protease
371 -From
372 -LPA1
373 -Collagen
374 -Carbon
375 -Molecular
376 -Stat3
377 -Genomewide
378 -Stem
379 -S1P
380 -Novel
381 -EBV
382 -Serum
383 -Abrogation
384 -That
385 -Pingfei
386 -Stromal
387 -Current
388 -Molecule
389 -MAP3K19
390 -Decisive
391 -Protein
392 -Fluid
393 -HDAC4
394 -Angiotensin
395 -SOCS1
396 -Different
397 -Membrane
398 -Domain
399 -Secretory
400 -Signalling
401 -NCI
402 -Bax
403 -ADAM
404 -Are
405 -Beta1
406 -Activation
407 -Problem
408 -Prognostic
409 -II
410 -Sputum
411 -Phosphatase
412 -Inhibition
413 -Profile
414 -Dogs
415 -HRCT
416 -lncRNA
417 -Storage
418 -Nitrated
419 -Box
420 -Forkhead
421 -CREB
422 -Sirtuin
423 -Cryptogenic
424 -Decreased
425 -Inhibits
426 -Formation
427 -MK2
428 -Comparison
429 -Mediated
430 -Latent
431 -Recombinant
432 -Microencapsulation
433 -PHGDH
434 -Organizing
435 -Dysfunction
436 -Way
437 -Using
438 -Peripheral
439 -Markers
440 -MiR
441 -Anti
442 -Studies
443 -May
444 -Significant
445 -Morphogenic
446 -Low
447 -Lactic
448 -Overexpression
449 -Protects
450 -Arsenic
451 -Caveolin
452 -pH
453 -Inhibit
454 -Proteasome
455 -MicroRNAs
456 -Toll
457 -Herpes
458 -CTGF
459 -Normal
460 -Defective
461 -CD44
462 -Large
463 -Ligands
464 -Axis
465 -NH2
466 -Progression
467 -Smad3
468 -Phenotype
469 -Ets
470 -Identification
471 -kB
472 -Role
473 -Relation
474 -Mode
475 -Developmental
476 -Fibrosis
477 -Stanniocalcin
478 -WNT10A
479 -Integrated
480 -Syndecan
481 -Metalloproteinase
482 -TOB2
483 -USP11
484 -WISP1
485 -Dysregulated
486 -Th17
487 -Progressive
488 -Key
489 -Subpleural
490 -Mast
491 -Rho
492 -Growth
493 -Upregulation
494 -Alleviates
495 -Re
496 -Preventive
497 -ITGB6
498 -Fibroblasts
499 -ATG4B
500 -Comparative
501 -Cthrc1
502 -mRNA
503 -Peptide
504 -SNAI
505 -BM
506 -ATPase
507 -AKT
508 -Fibroblastic
509 -Matriptase
510 -Sub
511 -Sustained
512 -Pleiotropic
513 -New
514 -Regulator
515 -Receptor
516 -Therapeutic
517 -Vimentin
518 -IGF
519 -Cells
520 -LIGHT
521 -Production
522 -D2
523 -Dehydroepiandrosterone
524 -Lin28B
525 -Antifibrotic
526 -Raised
527 -Proliferation
528 -Dependent
529 -COL1
530 -Lysocardiolipin
531 -Epithelium
532 -STAT3
533 -Prevents
534 -Th1
535 -NF
536 -CCN5
537 -Snail
538 -Myogenic
539 -CD4
540 -Akt
541 -TGFb1
542 -Accelerated
543 -PDGF
544 -Intratracheal
545 -TGFB1
546 -Cysteine
547 -Oxidant
548 -Effect
549 -Reprogramming
550 -IIP
551 -MS80
552 -FOXF1
553 -Promotes
554 -Assessment
555 -BLM
556 -CC16
557 -BAL
558 -CD248
559 -Ginsenoside
560 -Secreted
561 -Association
562 -IQ
563 -mTORC2
564 -Established
565 -The
566 -Combined
567 -Jun
568 -UIP
569 -Sulf2
570 -Thalidomide
571 -Bioenergetics
572 -TNF
573 -CCN2
574 -NEU1
575 -Attenuates
576 -HMGA2
577 -Group
578 -Conversion
579 -Predisposition
580 -Transglutaminase
581 -Pathway
582 -Reviews
583 -Treg
584 -DDR2
585 -Autophagy
586 -Hyper
587 -Bile
588 -Sunitinib
589 -Stiffening
590 -Signal
591 -Resolution
592 -De
593 -Type
594 -Factor
595 -Smad2
596 -Single
597 -PPAR
598 -WNT5A
599 -Novo
600 -An
601 -EGFR
602 -Cub
603 -GLI
604 -HSP47
605 -Early
606 -ERK1
607 -TGFbeta
608 -Deficiency
609 -hydroxytryptamine2A
610 -BAX
611 -Inhibitory
612 -Integrin
613 -Suppression
614 -Shikonin
615 -SMAD3
616 -Effects
617 -Metformin
618 -F1
619 -MAPK
620 -Modulation
621 -Bleomycin
622 -Injury
623 -Elevated
624 -Cellular
625 -Radioligand
626 -Citrus
627 -TIAM1
628 -Subjects
629 -Lung
630 -ARPC2
631 -H19
632 -EZH2
633 -Pathways
634 -Is
635 -Microarray
636 -Fas
637 -CCN1
638 -Ac
639 -miRNAs
640 -Myofibroblasts
641 -FFPE
642 -Inhibitor
643 -During
644 -Matrix
645 -Nrf2
646 -Immunomodulation
647 -C5aR
648 -Gremlin
649 -High
650 -Concentration
651 -Evaluation
652 -Roles
653 -Number
654 -Bone
655 -ACLP
656 -Hypertension
657 -Lipogenic
658 -Uncoupling
659 -Signaling
660 -Lrp5
661 -Berberine
662 -A4
663 -CD11c
664 -miR
665 -Chop
666 -Galectin
667 -Alveolar
668 -Transition
669 -Plasma
670 -Impacts
671 -Smad4
672 -Its
673 -Pathogenesis
674 -Inappropriate
675 -Investigation
676 -Beta
677 -Ca
678 -ERK
679 -Deregulation
680 -MSCs
681 -PTEN
682 -Lipoxin
683 -Nitric
684 -C1q
685 -KCa3
686 -kappaB
687 -Involvement
688 -MCP
689 -Pleural
690 -EMMPRIN
691 -Smooth
692 -Synthesis
693 -Blockade
694 -Compared
695 -Transgelin
...@@ -4,4 +4,4 @@ grep -E "\|t\|" title-sentences.txt | perl -ne 'if(/(\d+\|t\|)(.*)/){print "$2\n ...@@ -4,4 +4,4 @@ grep -E "\|t\|" title-sentences.txt | perl -ne 'if(/(\d+\|t\|)(.*)/){print "$2\n
4 4
5 # Run wisse 5 # Run wisse
6 6
7 -python3.4 wisse_example.py --input ../corpora/abstracts-titles.txt --idfmodel local --embedmodel /export/space1/users/compu2/bionlp/word-embeddings/w2v/almac/ignacio/data/word2vec/indexed_w2v_En_vector_space_H300 --localw binary --output ../embeddings/abstracts-titles.vec --format wisse & 7 +python3.4 wisse_example.py --input ../corpora/articles-titles.txt --idfmodel local --embedmodel /export/space1/users/compu2/bionlp/word-embeddings/w2v/almac/ignacio/data/word2vec/indexed_w2v_En_vector_space_H300 --localw binary --output ../embeddings/articles-titles.vec --format wisse &
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