Carlos-Francisco Méndez-Cruz / salmonella-trn

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STMTRN_summary_org_meta.tsv 99.7 KB
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TF	TypeRegulated	Regulated	Effect	SentCount	Ver/Dev	Att	Auto	Score	RI
InvF	gene	invF	regulator	1	1	0	0	1	True
Fis	gene	ndk	repressor	1	1	0	0	1	True
SlyA	gene	siiA	regulator	1	1	0	0	1	True
PhoP	gene	mgtA	activator	34	1	33	0	1	True
RtsA	gene	dsbA	activator	3	3	0	0	1	True
RcnR	gene	rcnA	regulator	1	1	0	0	1	True
CsgD	gene	bapA	regulator	2	2	0	0	1	True
ArcA	gene	arcA	regulator	1	0	1	0	1	True
CsrA	gene	ftnB	repressor	2	2	0	0	1	True
SlyA	gene	ydhI	regulator	1	1	0	0	1	True
YdiV	gene	fliZ	repressor	1	1	0	0	1	True
FliA	gene	ompR	activator	1	0	1	0	1	True
Sigma70	gene	fliC	activator	1	0	1	0	1	True
FNR	gene	pilT	repressor	1	1	0	0	1	True
ChbR	gene	chiP	regulator	1	1	0	0	1	True
RpoS	gene	rpoS	regulator	34	29	5	0	1	True
YgaE	gene	ompF	repressor	5	5	0	0	1	True
HNS	gene	sopB	regulator	3	3	0	0	1	True
RpoS	gene	sdiA	activator	2	1	1	0	1	True
sigma-28	gene	hha	repressor	4	4	0	0	1	True
Lrp	gene	hisJ	regulator	1	0	1	0	1	True
HilA	gene	prgH	regulator	5	4	1	0	1	True
RpoS	TU	otsBA	regulator	1	1	0	0	1	True
PmrA	gene	surA	regulator	3	0	3	0	1	True
CpxR	gene	csgA	repressor	2	2	0	0	1	True
PhoP	gene	pcgL	regulator	2	0	2	0	1	True
FabR	gene	yqfA	repressor	2	2	0	0	1	True
StpA	gene	crp	repressor	2	2	0	0	1	True
BaeR	gene	mdtABC	activator	1	1	0	0	1	True
SsrB	gene	ssrA	activator	9	9	0	0	1	True
HilD	gene	rpsL	regulator	1	1	0	0	1	True
PmrA	gene	wzz	regulator	1	1	0	0	1	True
RcsB	gene	rprA	activator	6	3	3	0	1	True
FliA	gene	fliZ	regulator	1	1	0	0	1	True
FlhDC	gene	fliZ	activator	2	1	1	0	1	True
PhoP	gene	srfN	activator	1	0	1	0	1	True
RtsA	gene	slrP	regulator	4	4	0	0	1	True
Lrp	gene	fimZ	regulator	4	3	1	0	1	True
SlyA	gene	narK	activator	1	1	0	0	1	True
SsrB	gene	srfJ	repressor	1	1	0	0	1	True
Fis	gene	hilA	regulator	3	3	0	0	1	True
NarL	gene	nirB	regulator	3	3	0	0	1	True
HNS	gene	csgD	activator	1	1	0	0	1	True
FliA	gene	STM3611	regulator	3	3	0	0	1	True
Lrp	gene	ssrA	repressor	1	1	0	0	1	True
Fis	gene	hlyE	repressor	2	2	0	0	1	True
OxyR	gene	agn43	regulator	4	4	0	0	1	True
DnaA	gene	dnaA	repressor	2	2	0	0	1	True
Lrp	gene	spvABCD	repressor	1	1	0	0	1	True
OmpR	gene	ssrB	activator	10	10	0	0	1	True
SgrR	gene	lacZ	activator	1	1	0	0	1	True
RamA	TU	acrAB	regulator	21	21	0	0	1	True
SdiA	gene	sdiA	regulator	15	12	3	0	1	True
DksA	gene	maeB	activator	1	0	1	0	1	True
FliA	gene	flgM	activator	2	0	2	0	1	True
CpxR	gene	ssrB	regulator	6	6	0	0	1	True
LexA	gene	cas1	activator	1	0	1	0	1	True
InvF	gene	phoH	regulator	1	1	0	0	1	True
HNS	gene	spvR	regulator	30	30	0	0	1	True
SlyA	gene	hilA	regulator	2	2	0	0	1	True
OmpR	gene	ompC	regulator	15	11	4	0	1	True
NhaR	gene	nhaA	regulator	1	1	0	0	1	True
OmpR	TU	flhDC	activator	3	3	0	0	1	True
RpoS	gene	yjbE	regulator	1	1	0	0	1	True
CRP	gene	acs	activator	3	3	0	0	1	True
IlvY	gene	ilvY	regulator	1	1	0	0	1	True
FlhDC	gene	rfaG	regulator	2	2	0	0	1	True
HNS	gene	hns	repressor	14	14	0	0	1	True
PhoB	gene	yqhC	activator	1	0	1	0	1	True
CsgD	gene	yciR	repressor	1	1	0	0	1	True
CpxR	gene	hilD	repressor	5	5	0	0	1	True
SpvR	gene	spvR	activator	4	3	0	1	1	True
CsgD	gene	hfq	repressor	6	6	0	0	1	True
OmpR	gene	ssaC	regulator	2	0	2	0	1	True
IclR	gene	yiaJ	repressor	1	1	0	0	1	True
MarA	gene	fliC	activator	2	2	0	0	1	True
SlyA	gene	lpxR	regulator	1	1	0	0	1	True
Fis	gene	ssaG	activator	10	10	0	0	1	True
LacI	gene	pspA	regulator	1	1	0	0	1	True
CpxR	gene	cpxA	activator	5	5	0	0	1	True
CsgD	gene	glyA	activator	1	1	0	0	1	True
Sigma28	gene	fliT	activator	2	2	0	0	1	True
ArgR	gene	STM1630	regulator	6	6	0	0	1	True
STM3124	gene	STM3122	activator	1	1	0	0	1	True
IgaA	gene	yojN	regulator	1	1	0	0	1	True
OxyR	gene	trxC	activator	3	2	1	0	1	True
RpoS	gene	rfaH	regulator	15	15	0	0	1	True
HU	gene	ihfA	activator	2	2	0	0	1	True
OmpR	gene	envZ	activator	4	3	1	0	1	True
Fis	gene	rpoS	repressor	6	6	0	0	1	True
SdiA	gene	srgE	activator	14	12	2	0	1	True
RpoS	gene	rpoH	activator	1	1	0	0	1	True
SlyA	gene	slyA	repressor	4	4	0	0	1	True
PhoP	gene	emrR	activator	1	0	1	0	1	True
SprB	gene	slrP	activator	3	3	0	0	1	True
NadR	TU	nadA-pnuC	repressor	1	1	0	0	1	True
ArgR	gene	fur	regulator	1	1	0	0	1	True
InvF	gene	hilA	activator	4	1	3	0	1	True
FlhDC	gene	clpP	activator	1	1	0	0	1	True
SsrB	gene	sifA	regulator	4	4	0	0	1	True
YncC	gene	katN	activator	1	1	0	0	1	True
HilA	gene	hilD	regulator	1	1	0	0	1	True
PhoP	gene	pagJ	regulator	1	1	0	0	1	True
PhoP	gene	pstS	regulator	1	1	0	0	1	True
StpA	gene	hns	repressor	10	10	0	0	1	True
OxyR	gene	katG	regulator	4	4	0	0	1	True
HU	gene	spvR	regulator	1	1	0	0	1	True
PhoP	gene	sipA	repressor	1	0	1	0	1	True
LeuO	gene	leuO	repressor	6	6	0	0	1	True
SdiA	gene	luxS	regulator	1	1	0	0	1	True
RpoS	gene	sdiA	regulator	1	1	0	0	1	True
SirA	TU	flhDC	regulator	1	1	0	0	1	True
DksA	gene	lacZ	activator	2	0	2	0	1	True
HNS	gene	mcpC	regulator	1	1	0	0	1	True
HilC	gene	hilD	activator	15	15	0	0	1	True
CsrA	gene	hilA	repressor	4	4	0	0	1	True
KdgR	gene	lacZ	regulator	2	2	0	0	1	True
SsrB	gene	sciS	repressor	1	0	1	0	1	True
PhoP	gene	orgB	repressor	2	2	0	0	1	True
SdiA	gene	sirA	regulator	1	1	0	0	1	True
SlyA	gene	STM2585	activator	1	0	1	0	1	True
FadD	gene	hilA	activator	2	2	0	0	1	True
SsrB	gene	invF	regulator	2	2	0	0	1	True
PhoP	gene	pagC	activator	23	5	18	0	1	True
HNS	gene	hlyE	activator	3	3	0	0	1	True
CysB	gene	cysD	activator	1	0	1	0	1	True
RpoS	gene	sodCII	activator	1	0	1	0	1	True
TdcA	gene	tdcA	activator	1	1	0	0	1	True
AraC	gene	tdcE	regulator	1	0	1	0	1	True
CueR	gene	copA	activator	11	7	4	0	1	True
LexA	gene	def	repressor	1	1	0	0	1	True
FlhDC	gene	rpoS	activator	1	1	0	0	1	True
SpvR	gene	spvR	regulator	40	40	0	0	1	True
SsrB	gene	sspH	regulator	1	0	1	0	1	True
FliA	gene	fliZ	activator	2	0	2	0	1	True
CRP	gene	acnA	activator	2	2	0	0	1	True
PhoP	TU	acrAB	activator	1	1	0	0	1	True
PhoB	gene	phoB	activator	2	1	1	0	1	True
ArcA	gene	cydA	activator	1	0	1	0	1	True
RcsB	gene	ftsZ	activator	4	4	0	0	1	True
McbR	gene	katN	activator	1	1	0	0	1	True
CsrA	TU	otsBA	repressor	3	3	0	0	1	True
LeuO	gene	cas2	activator	2	1	1	0	1	True
HilC	gene	tnpA	activator	2	0	2	0	1	True
LuxS	gene	luxS	regulator	4	4	0	0	1	True
KdgR	gene	fruF	regulator	4	4	0	0	1	True
DksA	gene	dksA	regulator	5	5	0	0	1	True
OmpR	gene	ssrA	repressor	1	1	0	0	1	True
PhoP	gene	hns	regulator	1	1	0	0	1	True
MetR	gene	hmp	activator	7	7	0	0	1	True
PmrA	gene	STM4118	regulator	4	2	2	0	1	True
RstA	gene	rstA	regulator	2	2	0	0	1	True
RpoS	gene	STM2303	activator	1	0	1	0	1	True
PmrA	gene	pmrHFIJKLM	regulator	8	4	4	0	1	True
StpA	gene	osmY	repressor	2	2	0	0	1	True
CsrA	gene	katE	repressor	3	3	0	0	1	True
OmpR	gene	hfq	regulator	2	2	0	0	1	True
SsrB	gene	ssaM	activator	7	6	1	0	1	True
Sigma28	gene	flk	activator	1	0	1	0	1	True
Fis	gene	invF	activator	2	2	0	0	1	True
H	gene	proV	regulator	1	0	1	0	1	True
OmpR	gene	phoP	regulator	1	1	0	0	1	True
InvF	gene	sopA	activator	1	1	0	0	1	True
FliA	gene	fliC	repressor	2	2	0	0	1	True
CRP	gene	aniC	activator	4	4	0	0	1	True
CsgD	gene	STM2123	activator	5	5	0	0	1	True
CpxR	gene	scsD	activator	1	0	1	0	1	True
OmpR	gene	gltA	regulator	2	2	0	0	1	True
HU	gene	ihfB	activator	2	2	0	0	1	True
Fis	gene	cadA	repressor	1	1	0	0	1	True
YdgT	gene	pefA	regulator	1	1	0	0	1	True
PhoP	gene	slrP	activator	4	3	1	0	1	True
OmpR	gene	hilD	regulator	6	6	0	0	1	True
Crl	gene	crl	regulator	3	3	0	0	1	True
FlhDC	gene	lacZ	repressor	1	1	0	0	1	True
LexA	gene	symE	regulator	1	0	1	0	1	True
FlhD	gene	fliA	activator	2	2	0	0	1	True
FhlA	gene	yghW	activator	2	2	0	0	1	True
AraC	gene	araE	repressor	1	1	0	0	1	True
SirA	gene	csrB	repressor	1	1	0	0	1	True
PmrA	gene	ugd	regulator	6	2	4	0	1	True
StpA	gene	ompS1	repressor	3	3	0	0	1	True
MetR	gene	metF	activator	1	1	0	0	1	True
SsrB	gene	spiC	activator	4	4	0	0	1	True
InvF	gene	hfq	regulator	1	0	1	0	1	True
SlyA	gene	sseA	activator	2	2	0	0	1	True
CueR	gene	lacZ	activator	2	0	2	0	1	True
Fur	gene	entE	repressor	1	1	0	0	1	True
RpoS	gene	hfq	repressor	24	24	0	0	1	True
SprB	gene	sopE	regulator	1	1	0	0	1	True
HNS	gene	pcgL	activator	1	1	0	0	1	True
FimZ	gene	fimZ	activator	2	0	1	1	1	True
FliA	gene	fljB	regulator	2	2	0	0	1	True
HilC	gene	dam	regulator	1	1	0	0	1	True
HilE	gene	hilE	repressor	3	3	0	0	1	True
CspE	gene	cspB	activator	1	1	0	0	1	True
FliA	gene	igaA	activator	1	0	1	0	1	True
DksA	gene	rpoS	activator	1	1	0	0	1	True
OmpR	gene	ompR	regulator	28	23	1	4	1	True
FimY	gene	fimA	activator	1	1	0	0	1	True
Sigma32	gene	ibpB	regulator	2	2	0	0	1	True
PmrA	gene	STM3968	activator	2	1	1	0	1	True
RcsAB	gene	rcsA	regulator	2	2	0	0	1	True
SlyA	gene	sopD	repressor	3	3	0	0	1	True
DksA	gene	fliA	repressor	1	1	0	0	1	True
RpoS	gene	nlpD	activator	1	1	0	0	1	True
FNR	gene	pilV	repressor	3	3	0	0	1	True
RtsA	gene	hilD	repressor	1	1	0	0	1	True
SoxR	gene	acnA	regulator	2	2	0	0	1	True
PhoP	gene	pmrHFIJKLM	regulator	1	0	1	0	1	True
HilD	gene	hilA	regulator	128	127	1	0	1	True
HdfR	gene	hdfR	activator	19	19	0	0	1	True
Fis	gene	STM1250	regulator	1	1	0	0	1	True
SprB	gene	sopB	regulator	1	1	0	0	1	True
FliZ	gene	sirA	activator	1	1	0	0	1	True
BolA	gene	dacC	regulator	1	1	0	0	1	True
YdgT	gene	pefB	regulator	1	1	0	0	1	True
TyrR	gene	hyaB	activator	4	4	0	0	1	True
FimZ	gene	hilE	activator	9	7	2	0	1	True
RcsB	gene	invF	repressor	1	1	0	0	1	True
Fur	gene	bfr	activator	5	3	2	0	1	True
RstA	gene	fhuA	repressor	1	1	0	0	1	True
PhoP	gene	sseA	regulator	1	0	1	0	1	True
HilA	gene	gogB	activator	1	0	1	0	1	True
FNR	gene	pflC	regulator	1	1	0	0	1	True
Rho	gene	thiM	activator	2	0	2	0	1	True
RpoS	gene	arcA	regulator	1	0	1	0	1	True
DksA	gene	hfq	regulator	1	1	0	0	1	True
ChbR	gene	chiP	activator	8	8	0	0	1	True
PhoB	gene	cpxP	activator	1	0	1	0	1	True
HNS	gene	hlyE	regulator	4	4	0	0	1	True
NsrR	gene	tehB	regulator	1	0	1	0	1	True
PmrA	gene	rcsC	activator	1	0	1	0	1	True
SlyA	gene	sopE2	regulator	3	3	0	0	1	True
SlyA	gene	pagJ	regulator	1	1	0	0	1	True
PhoP	gene	ssaG	regulator	1	0	1	0	1	True
FadR	gene	fabA	regulator	1	1	0	0	1	True
YdiV	TU	flhDC	repressor	3	3	0	0	1	True
PhoP	gene	invG	repressor	1	0	1	0	1	True
HilA	gene	flhD	repressor	1	1	0	0	1	True
EmrR	gene	pagC	regulator	2	1	1	0	1	True
LexA	gene	yigN	activator	1	0	1	0	1	True
NadR	gene	nadB	regulator	2	2	0	0	1	True
LsrR	gene	sdiA	regulator	1	1	0	0	1	True
SirA	gene	rck	regulator	1	1	0	0	1	True
NsrR	gene	nsrR	regulator	1	0	1	0	1	True
FliA	gene	gudT	activator	1	0	1	0	1	True
CsgD	gene	STM1344	regulator	7	7	0	0	1	True
HilA	gene	tnpA	activator	1	0	1	0	1	True
Fur	gene	invA	regulator	7	0	7	0	1	True
CRP	gene	ptsN	activator	2	2	0	0	1	True
CpxR	gene	rmf	activator	1	1	0	0	1	True
OmpR-P	gene	ompR	activator	4	2	2	0	1	True
FliZ	gene	fliZ	activator	2	1	1	0	1	True
FliA	gene	STM3611	activator	1	1	0	0	1	True
PmrA	gene	STM1269	regulator	2	2	0	0	1	True
DksA	gene	ssrB	activator	7	5	2	0	1	True
CpxR	gene	yjfP	regulator	1	1	0	0	1	True
SlyA	gene	kgtP	regulator	1	1	0	0	1	True
MarA	TU	flhDC	repressor	12	12	0	0	1	True
SsrB	gene	invF	activator	2	2	0	0	1	True
SirA	gene	hilD	activator	7	6	1	0	1	True
PhoP	TU	prgHIJK	repressor	2	2	0	0	1	True
PhoP	gene	rpoS	regulator	1	1	0	0	1	True
FlhD	TU	flhDC	activator	1	1	0	0	1	True
OxyR	gene	mntH	regulator	1	1	0	0	1	True
InvF	gene	sopE2	regulator	5	5	0	0	1	True
HilE	gene	hilD	repressor	3	3	0	0	1	True
LeuO	gene	hilE	activator	20	20	0	0	1	True
PhoP	gene	orgB	activator	3	0	3	0	1	True
OmpR	gene	fljB	regulator	8	8	0	0	1	True
SoxS	gene	rob	regulator	4	4	0	0	1	True
HNS	TU	leuABCD	regulator	1	1	0	0	1	True
DksA	gene	zwf	activator	1	0	1	0	1	True
OmpR	gene	hns	activator	2	2	0	0	1	True
RpoS	gene	yddX	regulator	1	1	0	0	1	True
Fis	gene	cat	activator	1	0	1	0	1	True
DksA	gene	dksA	repressor	1	1	0	0	1	True
Fis	gene	cspH	activator	1	1	0	0	1	True
HNS	gene	proV	regulator	8	8	0	0	1	True
SirA	gene	barA	regulator	4	4	0	0	1	True
OmpR	gene	ompS1	activator	1	0	1	0	1	True
PhoP	gene	spiC	regulator	1	1	0	0	1	True
HilE	gene	hilA	regulator	11	11	0	0	1	True
SirA	gene	hilC	regulator	16	16	0	0	1	True
PutA	gene	putA	activator	4	4	0	0	1	True
CpxR	gene	degP	activator	1	1	0	0	1	True
SpvR	gene	spvABCD	activator	5	5	0	0	1	True
HNS	gene	cdtB	regulator	1	1	0	0	1	True
TyrR	gene	ompF	regulator	1	1	0	0	1	True
Lrp	gene	lrp	activator	3	3	0	0	1	True
LexA	gene	uvrC	regulator	1	0	1	0	1	True
SlyA	gene	mgtA	activator	1	0	1	0	1	True
CusR	gene	cueO	regulator	1	1	0	0	1	True
LysR	gene	ompS2	regulator	1	1	0	0	1	True
OxyR	gene	ahpC	activator	2	0	2	0	1	True
PmrA	gene	pbgP	repressor	4	4	0	0	1	True
PhoP	gene	marT	activator	1	0	1	0	1	True
Zur	gene	rpmE2	regulator	1	0	1	0	1	True
SlyA	gene	STM1055	activator	1	1	0	0	1	True
FruR	gene	crp	activator	2	2	0	0	1	True
Fis	gene	ssrA	activator	6	6	0	0	1	True
OmpR	gene	cadC	regulator	4	4	0	0	1	True
HNS	gene	mgtA	regulator	1	1	0	0	1	True
PhoP	TU	prgHIJK	activator	3	2	1	0	1	True
PhoP	gene	hmpA	activator	1	0	1	0	1	True
OmpR	gene	ssrA	regulator	21	21	0	0	1	True
CsgD	gene	yhjH	activator	1	1	0	0	1	True
SsrB	gene	ssaH	regulator	5	5	0	0	1	True
CpxR	gene	pmrD	regulator	9	9	0	0	1	True
StpA	gene	rpoS	activator	1	0	1	0	1	True
SsrB	TU	flhDC	regulator	3	3	0	0	1	True
CsgD	gene	csgD	activator	3	1	2	0	1	True
RcsB	gene	osmC	regulator	1	0	1	0	1	True
RtcR	gene	map	activator	1	0	1	0	1	True
RcsA	gene	rcsA	regulator	1	1	0	0	1	True
SlyA	TU	flhDC	regulator	2	2	0	0	1	True
RpoS	gene	rpoS	activator	70	58	12	0	1	True
PhoP	gene	steA	activator	8	4	4	0	1	True
CsrA	gene	bfr	repressor	2	2	0	0	1	True
SdiA	gene	rck	regulator	20	14	6	0	1	True
SirA	gene	invF	activator	3	3	0	0	1	True
NsrR	gene	yeaR	repressor	1	0	1	0	1	True
SlyA	gene	narK	regulator	1	1	0	0	1	True
SoxS	gene	sodA	regulator	2	2	0	0	1	True
FadR	gene	fabA	activator	1	1	0	0	1	True
HNS	gene	rcsA	activator	1	0	1	0	1	True
SsrB	gene	spiC	regulator	1	1	0	0	1	True
BaeR	gene	mdtA	repressor	1	1	0	0	1	True
LexA	gene	umuD	activator	12	12	0	0	1	True
HNS	gene	siiA	activator	1	1	0	0	1	True
FliA	gene	dsbA	activator	1	0	1	0	1	True
FliA	gene	fliA	repressor	1	1	0	0	1	True
RpoS	gene	fljB	regulator	1	1	0	0	1	True
SsrB	gene	pagC	activator	2	0	2	0	1	True
HilA	gene	sipC	activator	2	0	2	0	1	True
HNS	gene	assT	repressor	9	9	0	0	1	True
CsrA	gene	dps	repressor	2	2	0	0	1	True
SlyA	gene	pagC	activator	15	10	5	0	1	True
FimY	gene	fimZ	activator	2	2	0	0	1	True
HilD	gene	cat	regulator	1	1	0	0	1	True
FNR	gene	hmp	repressor	3	3	0	0	1	True
ArcA	gene	barA	repressor	1	0	1	0	1	True
HilD	gene	orgBC	regulator	1	1	0	0	1	True
LexA	gene	sbmC	activator	12	12	0	0	1	True
HNS	gene	yaeB	regulator	5	5	0	0	1	True
FliA	gene	fliA	activator	1	0	1	0	1	True
HNS	gene	dsrA	repressor	1	1	0	0	1	True
CRP	gene	sdiA	regulator	4	4	0	0	1	True
FlhC	gene	lacZ	activator	1	1	0	0	1	True
HilC	gene	hns	regulator	1	1	0	0	1	True
PhoP	gene	invC	repressor	1	0	1	0	1	True
CpxR	gene	ppiA	regulator	1	0	1	0	1	True
SsrB	gene	ydgT	activator	1	1	0	0	1	True
RpoS	gene	sefA	regulator	2	2	0	0	1	True
PhoP	gene	macB	repressor	3	3	0	0	1	True
STM2361	gene	STM2360	activator	1	1	0	0	1	True
NorR	gene	hcp	regulator	1	1	0	0	1	True
NtrC	gene	glnA	activator	1	0	1	0	1	True
HilD	gene	fliZ	repressor	2	2	0	0	1	True
FimW	gene	fimY	repressor	2	2	0	0	1	True
SprB	gene	ugtL	activator	2	2	0	0	1	True
HilA	gene	mcpC	regulator	2	2	0	0	1	True
MntR	TU	sitABCD	repressor	1	1	0	0	1	True
SsrB	gene	oafA	regulator	1	0	1	0	1	True
PhoP	gene	spvR	repressor	1	1	0	0	1	True
CpxR	gene	hilA	repressor	3	3	0	0	1	True
EutR	gene	ssrB	activator	6	4	2	0	1	True
Fis	gene	cat	repressor	1	0	1	0	1	True
ArgR	gene	miaE	regulator	3	3	0	0	1	True
Rho	gene	hisG	activator	1	0	1	0	1	True
SlyA	gene	fruK	regulator	1	1	0	0	1	True
HdfR	gene	seqA	activator	1	1	0	0	1	True
RcsB	gene	STM1485	repressor	3	3	0	0	1	True
RpoS	gene	clpP	repressor	1	1	0	0	1	True
SlyA	gene	nmpC	regulator	1	1	0	0	1	True
HNS	gene	acrE	repressor	4	4	0	0	1	True
FlhD	gene	STM1697	regulator	15	15	0	0	1	True
RcsB	gene	sipB	regulator	2	2	0	0	1	True
Fis	gene	gyrB	activator	3	3	0	0	1	True
PhoP	gene	slrP	regulator	8	7	1	0	1	True
HNS	gene	clpV	regulator	1	1	0	0	1	True
PhoP	gene	mgtCBR	activator	7	4	3	0	1	True
HilA	gene	hilA	repressor	12	12	0	0	1	True
PhoP	gene	ptsN	regulator	2	2	0	0	1	True
FlhDC	gene	fliA	activator	1	1	0	0	1	True
BasR	gene	dgkA	activator	1	1	0	0	1	True
PhoP	gene	spiR	regulator	4	4	0	0	1	True
SlyA	TU	ssrAB	activator	8	8	0	0	1	True
SsrB	gene	csgD	activator	5	5	0	0	1	True
NsrR	gene	STM1808	repressor	1	0	1	0	1	True
DnaA	gene	dam	regulator	2	2	0	0	1	True
PmrA	gene	pagA	regulator	1	0	1	0	1	True
PhoP	gene	spoT	activator	1	0	1	0	1	True
CRP	gene	yihU	activator	3	2	1	0	1	True
HNS	gene	pefA	repressor	1	1	0	0	1	True
RstA	gene	rpoS	repressor	1	1	0	0	1	True
FlhC	gene	flhD	activator	1	1	0	0	1	True
SirA	gene	sopB	regulator	4	4	0	0	1	True
PhoP	gene	pgtE	activator	4	1	3	0	1	True
Rho	gene	mgtA	regulator	1	1	0	0	1	True
CsgD	gene	csgB	regulator	7	7	0	0	1	True
MltC	gene	csgD	regulator	4	4	0	0	1	True
PhoP	gene	relA	activator	1	0	1	0	1	True
RpoS	gene	hupB	activator	3	1	2	0	1	True
MntR	gene	mntH	repressor	3	3	0	0	1	True
RpoS	gene	crl	activator	1	1	0	0	1	True
PmrA	gene	STM0834	regulator	7	7	0	0	1	True
PhoP	gene	pagC	repressor	1	1	0	0	1	True
PmrA	gene	pmrA	repressor	3	3	0	0	1	True
IHF	gene	ptsG	regulator	1	1	0	0	1	True
PhoR	gene	phoB	activator	1	1	0	0	1	True
SlyA	gene	narG	regulator	1	1	0	0	1	True
RstA	gene	feoA	repressor	1	1	0	0	1	True
NsrR	gene	hcr	activator	1	1	0	0	1	True
RtsA	gene	csgD	activator	2	2	0	0	1	True
HU	gene	ssrA	repressor	2	2	0	0	1	True
SirA	gene	hilE	regulator	1	1	0	0	1	True
MarR	TU	marRAB	regulator	3	3	0	0	1	True
HilD	gene	sirA	regulator	1	1	0	0	1	True
Sigma28	gene	flgA	activator	1	0	1	0	1	True
SsrB	gene	ssaG	repressor	2	2	0	0	1	True
RcsB	gene	iagA	regulator	2	2	0	0	1	True
DeoR	gene	tsx	repressor	2	2	0	0	1	True
PhoP	gene	srfN	regulator	1	0	1	0	1	True
HilE	gene	hilE	regulator	1	1	0	0	1	True
Fis	gene	fis	regulator	12	12	0	0	1	True
HilD	gene	sinR	regulator	14	14	0	0	1	True
AraC	gene	sseD	regulator	1	1	0	0	1	True
Fur	gene	feoB	regulator	1	0	1	0	1	True
LexA	TU	umuDC	activator	1	1	0	0	1	True
RcsB	gene	rcsA	regulator	7	4	3	0	1	True
FlhD	TU	marRAB	repressor	1	1	0	0	1	True
HilE	gene	hilC	regulator	1	1	0	0	1	True
FlhD	TU	flhDC	regulator	1	1	0	0	1	True
NagC	gene	chiP	activator	3	2	1	0	1	True
NagC	gene	chiP	repressor	9	9	0	0	1	True
CadC	gene	marT	activator	1	1	0	0	1	True
RpoS	gene	yaiB	activator	1	1	0	0	1	True
SlyA	gene	relA	activator	2	0	2	0	1	True
FliA	gene	tdcB	activator	1	0	1	0	1	True
CRP	gene	cobB	activator	1	1	0	0	1	True
OmpR	gene	sifA	activator	1	1	0	0	1	True
PhoP	gene	pagM	activator	3	0	3	0	1	True
FNR	gene	lpxO	regulator	12	12	0	0	1	True
PocR	gene	tetA	regulator	1	1	0	0	1	True
FimZ	gene	flhD	repressor	2	2	0	0	1	True
SlyA	gene	hilA	repressor	3	3	0	0	1	True
SsrB	TU	flhDC	activator	3	1	2	0	1	True
HilD	gene	sopB	regulator	6	5	1	0	1	True
Fis	gene	gyrA	activator	3	3	0	0	1	True
PhoP	gene	ssaG	activator	1	0	1	0	1	True
OmpR	gene	ssaB	activator	1	0	1	0	1	True
NagC	TU	glmUS	repressor	1	1	0	0	1	True
CpxR	gene	pgtE	regulator	4	4	0	0	1	True
SlyA	gene	emrR	regulator	1	1	0	0	1	True
HilD	gene	prgK	activator	3	3	0	0	1	True
RpoS	gene	spvABCD	activator	1	1	0	0	1	True
SoxS	gene	fpr	activator	4	4	0	0	1	True
HNS	gene	yaeB	repressor	4	4	0	0	1	True
FabR	gene	fabR	regulator	3	3	0	0	1	True
HilD	gene	hilA	activator	154	151	3	0	1	True
MarA	gene	acrB	regulator	1	1	0	0	1	True
HNS	gene	leuO	regulator	2	2	0	0	1	True
LrhA	TU	flhDC	regulator	2	2	0	0	1	True
CsgD	TU	flhDC	regulator	1	0	1	0	1	True
SirA	gene	flgA	regulator	1	1	0	0	1	True
YdiV	TU	flhDC	regulator	1	1	0	0	1	True
PmrA	gene	pmrF	activator	4	1	3	0	1	True
Fis	gene	ssrA	regulator	10	10	0	0	1	True
RhaS	gene	STM4054	regulator	1	1	0	0	1	True
SdiA	TU	PSLT026	regulator	1	0	1	0	1	True
StpA	gene	stf	regulator	1	1	0	0	1	True
CysB	gene	cysB	regulator	7	5	1	1	1	True
HilA	gene	sopB	activator	1	1	0	0	1	True
IHF	gene	lacZ	regulator	1	1	0	0	1	True
RcsB	gene	narU	repressor	1	1	0	0	1	True
HNS	gene	tpx	activator	1	1	0	0	1	True
CsrA	gene	iacP	repressor	1	1	0	0	1	True
HNS	gene	proV	activator	1	1	0	0	1	True
StpA	gene	hilA	activator	1	1	0	0	1	True
Fis	gene	ndk	regulator	1	1	0	0	1	True
HilD	gene	flhD	activator	1	1	0	0	1	True
PutA	gene	putA	regulator	2	2	0	0	1	True
PhoP	gene	sipD	repressor	1	0	1	0	1	True
Lrp	gene	aslB	activator	1	1	0	0	1	True
LeuO	gene	hilE	regulator	13	13	0	0	1	True
SlyA	gene	STM2585	regulator	1	1	0	0	1	True
PhoP	gene	lacZ	regulator	1	0	1	0	1	True
SlyA	gene	STM2138	regulator	1	1	0	0	1	True
RpoS	gene	dps	activator	6	2	4	0	1	True
LeuO	gene	ompS2	regulator	19	18	1	0	1	True
MarA	TU	acrAB	activator	24	23	1	0	1	True
PhoP	gene	srfJ	regulator	1	1	0	0	1	True
LexA	gene	hlyE	regulator	1	0	1	0	1	True
DksA	gene	sitA	activator	1	0	1	0	1	True
NagC	gene	galS	repressor	1	1	0	0	1	True
CsgD	TU	csgBA	regulator	15	15	0	0	1	True
RpoS	gene	phoQ	regulator	1	1	0	0	1	True
HilC	gene	hha	regulator	1	1	0	0	1	True
RcsB	gene	barA	activator	7	5	2	0	1	True
RpoS	gene	csgD	regulator	8	7	1	0	1	True
CsrA	gene	rpoE	activator	1	1	0	0	1	True
CadC	gene	cadA	activator	4	4	0	0	1	True
HilD	gene	phoH	activator	5	5	0	0	1	True
PhoP	gene	rflM	regulator	1	0	1	0	1	True
RpoS	gene	sroC	activator	1	1	0	0	1	True
RcdA	gene	csgD	activator	2	2	0	0	1	True
PmrA	gene	ugd	activator	20	7	13	0	1	True
NtrC	gene	glnG	activator	2	2	0	0	1	True
FliA	TU	flgKL	regulator	4	4	0	0	1	True
GlnG	gene	glnA	regulator	2	2	0	0	1	True
IscR	gene	hilD	repressor	4	4	0	0	1	True
Crl	gene	katN	activator	1	1	0	0	1	True
MlrA	gene	csgD	regulator	11	11	0	0	1	True
HilD	gene	lpxR	activator	5	5	0	0	1	True
HilD	gene	phoH	regulator	10	10	0	0	1	True
FliA	gene	ybeM	activator	2	0	2	0	1	True
CsgD	gene	csgB	activator	1	1	0	0	1	True
LacI	gene	araC	regulator	1	1	0	0	1	True
CysB	gene	cysE	regulator	1	0	1	0	1	True
FimZ	gene	fimZ	regulator	6	0	0	6	1	True
OmpR	gene	map	regulator	1	0	1	0	1	True
OmpR	gene	cas5	regulator	1	1	0	0	1	True
RtsA	gene	invF	activator	1	1	0	0	1	True
RamA	TU	acrAB	activator	36	35	1	0	1	True
RpoS	gene	narZ	regulator	1	0	1	0	1	True
Lrp	gene	dam	repressor	1	1	0	0	1	True
HilD	gene	lacZ	activator	2	2	0	0	1	True
SdiA	gene	repA2	regulator	1	0	1	0	1	True
HNS	gene	siiA	regulator	2	2	0	0	1	True
LexA	gene	cas2	activator	1	0	1	0	1	True
HilD	gene	lon	regulator	2	0	2	0	1	True
OxyR	gene	tviA	activator	3	3	0	0	1	True
PhoP	gene	sseA	activator	1	0	1	0	1	True
PhoP	gene	ydeI	activator	4	4	0	0	1	True
PmrA	gene	STM2297	activator	1	0	1	0	1	True
FimZ	gene	hilE	regulator	2	2	0	0	1	True
Rho	gene	mgtA	activator	19	1	18	0	1	True
Crl	gene	katE	repressor	1	1	0	0	1	True
MarA	gene	asmA	activator	1	1	0	0	1	True
IgaA	gene	dsbA	repressor	1	1	0	0	1	True
PmrA	gene	ssaG	repressor	7	7	0	0	1	True
RpoS	gene	dam	activator	1	0	1	0	1	True
CpxR	gene	clpX	activator	2	2	0	0	1	True
HilD	gene	sigE	regulator	4	4	0	0	1	True
SirC	gene	hilA	activator	2	2	0	0	1	True
OmpR	gene	sifB	activator	2	2	0	0	1	True
DksA	gene	hmpA	activator	1	0	1	0	1	True
PhoP	gene	prgH	repressor	3	2	1	0	1	True
NsrR	gene	ygbA	regulator	3	0	3	0	1	True
CpxR	gene	acrB	activator	3	3	0	0	1	True
PhoP	gene	tdcA	regulator	2	0	2	0	1	True
FimY	gene	fimY	regulator	1	1	0	0	1	True
DksA	gene	lacZ	regulator	4	4	0	0	1	True
Fis	gene	spvR	regulator	2	1	1	0	1	True
NsrR	gene	hmp	repressor	1	1	0	0	1	True
FliA	gene	fliC	regulator	2	1	1	0	1	True
RcsB	gene	rcsA	repressor	5	5	0	0	1	True
LeuO	gene	ompS1	regulator	30	29	1	0	1	True
CsrA	gene	STM3611	regulator	1	1	0	0	1	True
SsrB	gene	invF	repressor	16	16	0	0	1	True
HNS	gene	fimAICDHF	repressor	1	1	0	0	1	True
AraC	gene	araD	regulator	2	0	2	0	1	True
HNS	gene	csgD	regulator	14	11	3	0	1	True
AcrR	TU	acrAB	regulator	5	5	0	0	1	True
CspE	gene	yciF	regulator	8	8	0	0	1	True
CpxR	gene	acrB	repressor	6	6	0	0	1	True
RcsB	gene	rpoS	regulator	1	1	0	0	1	True
SlyA	gene	ydhJ	regulator	1	1	0	0	1	True
PmrA	gene	yibD	activator	2	0	2	0	1	True
PhoP	gene	map	regulator	1	0	1	0	1	True
HNS	gene	lacZ	activator	1	1	0	0	1	True
SdiA	gene	srgB	regulator	3	1	2	0	1	True
FliZ	gene	STM3156	activator	1	0	1	0	1	True
RpoS	gene	dnaK	repressor	1	1	0	0	1	True
SsrB	gene	spiR	activator	1	1	0	0	1	True
HilC	gene	hilD	regulator	10	10	0	0	1	True
TviA	TU	flhDC	repressor	7	7	0	0	1	True
RamA	gene	ramA	activator	12	11	1	0	1	True
HNS	TU	csgBA	activator	2	2	0	0	1	True
RpoS	gene	yciG	regulator	1	0	1	0	1	True
HilC	gene	lacZ	activator	1	0	1	0	1	True
RpoS	gene	sufC	regulator	1	1	0	0	1	True
DksA	gene	ilvD	activator	1	1	0	0	1	True
PhoP	gene	araC	activator	1	0	1	0	1	True
PhoR	gene	mgtC	regulator	1	0	1	0	1	True
RcsB	gene	csgD	activator	2	1	1	0	1	True
FlhDC	gene	fljB	regulator	2	2	0	0	1	True
HilC	gene	sopB	regulator	1	1	0	0	1	True
OmpR-P	gene	spiC	activator	3	3	0	0	1	True
PhoP	gene	invE	repressor	1	0	1	0	1	True
PmrA	gene	ssaG	activator	1	0	1	0	1	True
PhoP	gene	virK	activator	18	2	16	0	1	True
StpA	gene	ugtL	activator	1	0	1	0	1	True
DksA	gene	ivbL	activator	1	1	0	0	1	True
Fur	gene	ftnA	activator	5	3	2	0	1	True
EmrR	gene	phoP	activator	16	16	0	0	1	True
CsgD	gene	fimA	activator	2	2	0	0	1	True
RtsB	gene	flgM	regulator	1	1	0	0	1	True
HilC	gene	hilA	repressor	10	10	0	0	1	True
SsrB	gene	STM2585	regulator	2	2	0	0	1	True
HNS	gene	cat	regulator	1	1	0	0	1	True
TviA	gene	hilA	regulator	1	1	0	0	1	True
CRP	gene	dctA	activator	1	0	1	0	1	True
AraC	gene	polB	activator	1	1	0	0	1	True
RpoS	gene	hmp	activator	1	1	0	0	1	True
FlhDC	gene	STM1344	regulator	4	4	0	0	1	True
LexA	gene	recA	activator	1	0	1	0	1	True
Hha	gene	hilA	regulator	5	5	0	0	1	True
IHF	gene	ssrA	repressor	2	2	0	0	1	True
HilA	gene	hilA	regulator	24	21	3	0	1	True
SoxR	gene	yggX	activator	2	2	0	0	1	True
SsrB	gene	ssaG	activator	11	8	3	0	1	True
PhoP	gene	ssrA	activator	3	3	0	0	1	True
PmrA	gene	pmrD	activator	5	0	5	0	1	True
AcrR	gene	tolC	regulator	4	4	0	0	1	True
PhoP	gene	sipC	repressor	1	0	1	0	1	True
CRP	gene	gatZ	regulator	1	1	0	0	1	True
PmrA	gene	pmrA	regulator	3	0	3	0	1	True
HNS	gene	katE	repressor	1	1	0	0	1	True
FNR	gene	hilA	regulator	3	3	0	0	1	True
PhoP	gene	phoN	regulator	9	7	2	0	1	True
HNS	gene	slyA	regulator	4	3	1	0	1	True
OmpR	gene	slyA	activator	1	1	0	0	1	True
DeoR	gene	tsx	regulator	2	2	0	0	1	True
CsrA	gene	hilD	regulator	19	19	0	0	1	True
KdgR	gene	kdgK	regulator	2	2	0	0	1	True
SsrB	gene	oafA	activator	1	1	0	0	1	True
FNR	gene	hyaB	regulator	1	1	0	0	1	True
RamA	gene	tolC	activator	7	7	0	0	1	True
PhoP	gene	slyB	activator	23	16	7	0	1	True
RtsA	gene	hilC	repressor	1	1	0	0	1	True
RpoS	gene	ygaE	regulator	1	1	0	0	1	True
SlyA	gene	slyB	activator	1	0	1	0	1	True
InvF	gene	siiA	activator	1	1	0	0	1	True
CspA	gene	cspD	activator	1	1	0	0	1	True
FNR	gene	sodB	repressor	2	2	0	0	1	True
HilD	gene	ssrB	regulator	3	3	0	0	1	True
LexA	gene	recA	regulator	2	2	0	0	1	True
LeuO	gene	ompX	repressor	1	1	0	0	1	True
CRP	gene	ptsN	repressor	2	2	0	0	1	True
LeuO	gene	stpA	activator	1	1	0	0	1	True
MarA	gene	marR	regulator	1	1	0	0	1	True
SsrB	gene	ssaB	activator	13	10	3	0	1	True
SlyA	gene	pagK	regulator	1	1	0	0	1	True
DksA	gene	dksA	activator	1	0	1	0	1	True
Lrp	TU	ilvIH	repressor	2	2	0	0	1	True
SoxS	gene	rob	repressor	5	5	0	0	1	True
Fur	gene	spvC	regulator	3	0	3	0	1	True
RtsA	TU	ssrAB	regulator	1	1	0	0	1	True
CsgD	gene	STM1703	activator	5	5	0	0	1	True
QseB	gene	invF	regulator	1	1	0	0	1	True
PhoP	TU	flhDC	regulator	1	0	1	0	1	True
SoxS	TU	flhDC	regulator	10	10	0	0	1	True
STM4417	gene	srfJ	regulator	1	1	0	0	1	True
AraC	gene	sicA	activator	1	0	1	0	1	True
UvrY	gene	csrB	regulator	1	1	0	0	1	True
Fis	gene	ssaG	regulator	19	19	0	0	1	True
CsgD	gene	STM3611	activator	2	2	0	0	1	True
MarA	gene	tolC	regulator	1	1	0	0	1	True
Fis	gene	hilA	activator	6	6	0	0	1	True
HilA	gene	ssaH	repressor	1	1	0	0	1	True
LeuO	gene	tpx	regulator	4	3	1	0	1	True
AraC	gene	xylA	regulator	2	0	2	0	1	True
HilD	gene	sprB	activator	13	13	0	0	1	True
CRP	gene	spvR	activator	2	2	0	0	1	True
Lrp	gene	tcfA	regulator	11	11	0	0	1	True
NsrR	gene	trpD	regulator	1	0	1	0	1	True
OmpR-P	gene	ssrB	repressor	1	1	0	0	1	True
KdgR	gene	kduI	regulator	3	3	0	0	1	True
RflM	TU	flhDC	repressor	14	14	0	0	1	True
HNS	gene	hha	activator	1	1	0	0	1	True
HNS	gene	sbmC	activator	4	4	0	0	1	True
Hha	gene	pefB	regulator	1	1	0	0	1	True
Cbl	gene	metE	activator	1	0	1	0	1	True
SlyA	gene	narH	activator	1	1	0	0	1	True
CsgD	gene	STM1987	activator	7	6	1	0	1	True
SsrB	gene	flhD	activator	1	0	1	0	1	True
Fur	gene	fhuF	repressor	1	0	1	0	1	True
HdfR	gene	dam	activator	3	3	0	0	1	True
PhoP	gene	pagK	activator	3	0	3	0	1	True
CpxR	gene	yqaE	activator	1	1	0	0	1	True
NarL	gene	ytfE	activator	2	2	0	0	1	True
RpoS	gene	yliH	activator	2	2	0	0	1	True
IHF	gene	ihfA	regulator	3	3	0	0	1	True
RpoS	gene	dinB	activator	1	0	1	0	1	True
HNS	gene	ssrA	activator	2	2	0	0	1	True
PhoP	gene	STM3595	activator	2	0	2	0	1	True
CRP	gene	pepE	activator	1	0	1	0	1	True
RpoS	gene	dctA	activator	4	2	2	0	1	True
SsrB	gene	rpoE	repressor	1	1	0	0	1	True
SlyA	gene	rstA	activator	1	0	1	0	1	True
HilA	gene	lpxR	regulator	1	1	0	0	1	True
PhoP	gene	tdcA	activator	4	0	4	0	1	True
RpoS	gene	sefA	activator	2	2	0	0	1	True
SprB	gene	sifB	activator	6	6	0	0	1	True
HilE	gene	sopA	regulator	1	1	0	0	1	True
PhoP	gene	rhuM	activator	1	0	1	0	1	True
AraC	gene	araE	regulator	4	2	2	0	1	True
SdiA	gene	srgA	regulator	2	0	2	0	1	True
RpoS	gene	csrA	activator	1	1	0	0	1	True
BaeR	gene	baeR	regulator	1	1	0	0	1	True
SsrB	gene	lacZ	regulator	1	1	0	0	1	True
Sigma54	gene	rpoN	regulator	1	0	1	0	1	True
HNS	gene	spvR	repressor	2	2	0	0	1	True
PhoP	gene	sseL	regulator	9	8	1	0	1	True
Sigma28	gene	map	regulator	1	1	0	0	1	True
HilD	gene	mcpC	activator	2	2	0	0	1	True
Fur	gene	bfd	regulator	1	0	1	0	1	True
CsrA	gene	tdcA	activator	1	1	0	0	1	True
HilD	gene	prgH	activator	3	3	0	0	1	True
HilD	gene	hfq	repressor	1	1	0	0	1	True
CsgD	gene	yhjH	regulator	44	44	0	0	1	True
PhoP	gene	pgtE	repressor	1	0	1	0	1	True
LsrR	gene	srgE	regulator	1	1	0	0	1	True
SlyA	gene	mig-14	regulator	3	2	1	0	1	True
SsrB	gene	ssaG	regulator	1	0	1	0	1	True
SlyA	gene	pagD	activator	7	7	0	0	1	True
CytR	gene	tsx	activator	2	2	0	0	1	True
OmpR	gene	cas2	regulator	1	1	0	0	1	True
PmrA	gene	eptA	regulator	1	1	0	0	1	True
PmrA	gene	gnd	regulator	3	0	3	0	1	True
LexA	gene	tum	repressor	3	1	2	0	1	True
CsgD	gene	STM3611	regulator	6	6	0	0	1	True
CRP	gene	crp	repressor	10	10	0	0	1	True
RtsA	gene	hilD	activator	19	19	0	0	1	True
OmpR	gene	rpoS	regulator	1	1	0	0	1	True
SsrB	TU	ssrAB	activator	1	1	0	0	1	True
SirA	gene	hilA	repressor	2	2	0	0	1	True
OmpR	gene	spiR	regulator	5	5	0	0	1	True
FlhDC	TU	flhDC	repressor	3	3	0	0	1	True
CysB	gene	cysJIH	activator	11	6	5	0	1	True
IHF	gene	hilA	repressor	1	1	0	0	1	True
FlhC	gene	rfaG	regulator	2	2	0	0	1	True
SdiA	gene	rck	activator	12	12	0	0	1	True
NsrR	gene	hmpA	activator	2	1	1	0	1	True
CRP	gene	ompR	regulator	2	2	0	0	1	True
SsrB	gene	sseB	activator	1	0	1	0	1	True
PmrA	gene	basR	activator	1	0	1	0	1	True
LexA	gene	lacZ	regulator	1	0	1	0	1	True
PutA	gene	dctA	activator	1	1	0	0	1	True
CRP	gene	sdiA	activator	11	11	0	0	1	True
HNS	gene	tpx	repressor	5	5	0	0	1	True
FlhDC	gene	STM3611	regulator	1	1	0	0	1	True
RcsB	gene	tolB	activator	1	1	0	0	1	True
CpxR	gene	cpxA	repressor	1	1	0	0	1	True
YdcI	gene	fumA	repressor	1	1	0	0	1	True
PspC	gene	ompA	regulator	2	2	0	0	1	True
CpxR	gene	degP	regulator	1	1	0	0	1	True
HilD	TU	ssrAB	regulator	23	23	0	0	1	True
HilC	gene	hilC	activator	12	12	0	0	1	True
PhoP	gene	pagK	regulator	2	1	1	0	1	True
PhoP	gene	fliC	repressor	2	0	2	0	1	True
HNS	TU	flhDC	activator	3	3	0	0	1	True
NsrR	gene	hcr	regulator	1	0	1	0	1	True
CsgD	gene	STM1697	regulator	1	1	0	0	1	True
OmpR	gene	ompC	activator	11	7	4	0	1	True
ArgR	gene	argI	regulator	1	1	0	0	1	True
InvF	gene	sipA	activator	8	7	1	0	1	True
HNS	gene	micF	repressor	1	1	0	0	1	True
HilD	gene	ssaG	regulator	2	2	0	0	1	True
OmpR	gene	hfq	activator	1	1	0	0	1	True
SlyA	gene	pagC	regulator	22	21	1	0	1	True
FNR	gene	arcA	regulator	2	2	0	0	1	True
LeuO	gene	assT	regulator	1	0	1	0	1	True
MarA	TU	acrAB	regulator	9	9	0	0	1	True
HilA	gene	STM3138	regulator	2	2	0	0	1	True
RcsB	gene	dam	activator	2	2	0	0	1	True
RstA	gene	feoB	repressor	3	3	0	0	1	True
H	gene	csgD	repressor	1	0	1	0	1	True
HilD	gene	ugtL	activator	2	2	0	0	1	True
LeuO	TU	ilvIH	activator	1	1	0	0	1	True
RpoS	gene	hlyE	repressor	1	1	0	0	1	True
PmrA	gene	pmrC	activator	13	0	13	0	1	True
RpoS	gene	trkH	activator	1	0	1	0	1	True
EvgA	gene	safA	activator	1	0	1	0	1	True
RtsB	gene	yddX	regulator	1	1	0	0	1	True
PtsJ	gene	pdxK	regulator	3	3	0	0	1	True
ZntR	gene	copA	regulator	2	0	2	0	1	True
HilD	gene	lon	activator	3	3	0	0	1	True
OmpR	gene	fljB	activator	2	2	0	0	1	True
Crl	gene	katE	activator	2	2	0	0	1	True
Crl	gene	csgD	activator	9	9	0	0	1	True
YqhC	gene	sipB	activator	1	1	0	0	1	True
MarR	gene	slyA	regulator	1	1	0	0	1	True
TviA	gene	iagA	repressor	1	1	0	0	1	True
PmrA	gene	tolB	activator	1	0	1	0	1	True
Lrp	TU	ilvIH	activator	5	5	0	0	1	True
RpoS	gene	csrA	regulator	4	4	0	0	1	True
PhoP	gene	rflM	activator	1	0	1	0	1	True
PrpR	gene	prpBCDE	activator	15	13	2	0	1	True
Lrp	gene	ybaO	activator	1	1	0	0	1	True
CRP	gene	stiB	repressor	3	3	0	0	1	True
LeuO	gene	cas5	activator	1	1	0	0	1	True
PhoP	gene	prgH	regulator	1	1	0	0	1	True
PhoP	gene	orgBC	regulator	1	1	0	0	1	True
OmpR	gene	tviA	activator	3	2	1	0	1	True
NsrR	gene	nsrR	repressor	1	0	1	0	1	True
zur	gene	znuC	regulator	3	3	0	0	1	True
GntR	gene	srfN	regulator	1	1	0	0	1	True
PmrA	gene	rpoN	activator	1	0	1	0	1	True
SprB	gene	avrA	regulator	1	1	0	0	1	True
OmpR	gene	pgtE	activator	2	2	0	0	1	True
PhoP	gene	prgJ	repressor	1	0	1	0	1	True
FlhD	gene	lacZ	activator	1	1	0	0	1	True
HilD	gene	invF	regulator	25	25	0	0	1	True
PmrA	gene	cld	regulator	1	0	1	0	1	True
FNR	gene	hlyE	activator	9	9	0	0	1	True
LeuO	gene	assT	activator	19	10	9	0	1	True
SirA	gene	sirC	repressor	2	2	0	0	1	True
CsrA	gene	lldD	activator	2	2	0	0	1	True
CsrA	gene	spvR	activator	3	3	0	0	1	True
Fur	gene	gpmA	regulator	1	0	1	0	1	True
CsgD	gene	STM1703	repressor	7	7	0	0	1	True
CsrA	gene	slyA	repressor	5	5	0	0	1	True
AraC	gene	dcp	regulator	3	2	1	0	1	True
SoxS	gene	ompW	regulator	10	10	0	0	1	True
FlhC	gene	dnaK	activator	2	2	0	0	1	True
OmpR	gene	tviB	regulator	3	3	0	0	1	True
MarA	TU	marRAB	activator	4	4	0	0	1	True
CspE	gene	cspA	regulator	2	2	0	0	1	True
Lrp	gene	fimZ	activator	12	12	0	0	1	True
Sigma28	gene	fliC	activator	5	0	5	0	1	True
HNS	gene	sifB	activator	1	1	0	0	1	True
HilA	gene	invH	regulator	1	0	1	0	1	True
HilA	gene	flhD	regulator	1	1	0	0	1	True
HU	gene	narH	regulator	1	1	0	0	1	True
HNS	TU	yejABEF	regulator	5	5	0	0	1	True
HNS	gene	hilE	repressor	1	1	0	0	1	True
HilA	TU	STM4509	regulator	1	1	0	0	1	True
NsrR	gene	ytfE	repressor	1	1	0	0	1	True
OmpR	TU	ssrAB	activator	26	26	0	0	1	True
OmpR	gene	phoP	activator	1	1	0	0	1	True
UvrY	gene	csrB	activator	1	1	0	0	1	True
CysB	gene	sbp	regulator	2	0	2	0	1	True
Zur	gene	zinT	regulator	3	2	1	0	1	True
CytR	gene	udp	regulator	1	1	0	0	1	True
AraC	gene	sefR	activator	1	0	1	0	1	True
FlhD	gene	spiC	activator	1	1	0	0	1	True
PhoP	gene	hit	regulator	1	0	1	0	1	True
PhoP	gene	lon	activator	1	0	1	0	1	True
RpoS	gene	spvR	activator	10	6	4	0	1	True
CsgD	gene	adrA	activator	31	27	4	0	1	True
StpA	gene	hilA	repressor	9	9	0	0	1	True
EmrR	gene	emrR	repressor	1	1	0	0	1	True
InvF	gene	sopE	activator	4	4	0	0	1	True
PhoB	gene	sapA	activator	1	0	1	0	1	True
FliZ	TU	flhDC	regulator	8	8	0	0	1	True
FNR	gene	asd	regulator	2	2	0	0	1	True
LexA	gene	sulA	repressor	1	0	1	0	1	True
HilD	gene	hilC	activator	17	16	1	0	1	True
SoxS	gene	soxS	regulator	2	1	1	0	1	True
PhoP	gene	fliC	activator	3	2	1	0	1	True
HilD	gene	siiB	regulator	8	8	0	0	1	True
CpxR	TU	tatABC	regulator	4	4	0	0	1	True
CsgD	gene	STM1697	activator	2	2	0	0	1	True
DgoR	gene	dgoT	activator	2	2	0	0	1	True
Fur	gene	fhuA	activator	1	0	1	0	1	True
Fur	gene	iroB	regulator	4	0	4	0	1	True
AraC	gene	araC	activator	2	0	2	0	1	True
PhoB	gene	mgtC	activator	1	0	1	0	1	True
Sigma32	gene	opdA	activator	2	0	2	0	1	True
ArgR	gene	STM1631	regulator	12	12	0	0	1	True
RtsB	TU	flhDC	repressor	7	7	0	0	1	True
LysR	gene	ompS1	regulator	1	1	0	0	1	True
PhoP	gene	pagD	regulator	6	3	3	0	1	True
CsgD	gene	csgD	regulator	25	19	5	1	1	True
RcsB	gene	rflM	activator	1	0	1	0	1	True
Sigma70	gene	invF	activator	1	0	1	0	1	True
Fis	gene	cspH	repressor	1	1	0	0	1	True
HNS	gene	mcpC	repressor	1	1	0	0	1	True
PhoB	gene	pstS	regulator	2	2	0	0	1	True
DksA	TU	aceEF	regulator	1	1	0	0	1	True
RpoS	gene	fliC	repressor	1	1	0	0	1	True
HilD	gene	hilA	repressor	30	30	0	0	1	True
PhoP	gene	ugd	repressor	8	8	0	0	1	True
RcsAB	gene	rcsB	regulator	1	0	1	0	1	True
PmrA	gene	pmrF	regulator	1	0	1	0	1	True
HNS	gene	leuO	activator	1	1	0	0	1	True
InvF	gene	sopE	regulator	5	5	0	0	1	True
RpoS	TU	csgDEFG	regulator	2	2	0	0	1	True
HNS	gene	proV	repressor	3	3	0	0	1	True
FNR	gene	fnr	activator	2	1	1	0	1	True
PhoP	gene	phoQ	regulator	7	3	4	0	1	True
CRP	gene	acrB	activator	1	1	0	0	1	True
SlyA	gene	lacZ	activator	1	0	1	0	1	True
CRP	gene	pduA	repressor	1	1	0	0	1	True
OmpR	TU	ssrAB	regulator	36	36	0	0	1	True
HilA	gene	sopB	regulator	4	4	0	0	1	True
CspA	gene	gyrA	activator	1	1	0	0	1	True
PhoP	gene	sseB	regulator	1	1	0	0	1	True
PhoP	gene	orgBC	activator	2	2	0	0	1	True
InvF	gene	invF	activator	3	0	3	0	1	True
RcsA	TU	flhDC	activator	1	1	0	0	1	True
PhoP	gene	fliZ	repressor	1	1	0	0	1	True
CpxR	gene	mgrB	regulator	5	5	0	0	1	True
SlyA	gene	ssrA	activator	6	4	2	0	1	True
PhoB	gene	hilC	regulator	2	2	0	0	1	True
RpoS	gene	spvA	regulator	1	0	1	0	1	True
SlyA	gene	glpA	regulator	1	1	0	0	1	True
NagC	TU	glmUS	activator	1	1	0	0	1	True
STM1674	gene	barA	repressor	4	4	0	0	1	True
RtcR	gene	rtcA	activator	11	9	2	0	1	True
RpoS	gene	corA	activator	1	0	1	0	1	True
RpoS	gene	ecnB	activator	1	0	1	0	1	True
SirA	gene	sopB	repressor	1	1	0	0	1	True
CRP	gene	pduA	activator	1	0	1	0	1	True
CpxR	gene	soxS	regulator	1	1	0	0	1	True
OmpR	TU	csgDEFG	regulator	2	2	0	0	1	True
Fur	gene	feoA	regulator	1	0	1	0	1	True
PhoP	gene	mgtB	regulator	1	0	1	0	1	True
RtsA	gene	rtsA	activator	1	0	0	1	1	True
FNR	gene	sodCI	regulator	2	2	0	0	1	True
PhoP	gene	rstA	activator	5	1	4	0	1	True
ZntR	gene	cueO	regulator	2	0	2	0	1	True
SoxS	TU	acrAB	regulator	6	6	0	0	1	True
HilA	gene	sopE	regulator	3	3	0	0	1	True
PhoP	gene	mgtC	regulator	26	19	7	0	1	True
Sigma32	gene	ibpA	regulator	1	1	0	0	1	True
SdiA	gene	pefI	regulator	4	4	0	0	1	True
PhoP	gene	mgtCB	activator	5	1	4	0	1	True
MviA	gene	igaA	regulator	1	1	0	0	1	True
Fis	TU	flhDC	regulator	4	4	0	0	1	True
MarA	gene	flhB	repressor	8	8	0	0	1	True
RcsB	gene	rcsB	activator	10	2	8	0	1	True
SlyA	TU	ssrAB	repressor	3	3	0	0	1	True
OmpR	gene	gltA	activator	1	1	0	0	1	True
CpxR	gene	fliL	activator	2	2	0	0	1	True
HNS	gene	rpoS	regulator	18	18	0	0	1	True
CRP	gene	ompD	activator	3	3	0	0	1	True
CsgD	gene	STM1703	regulator	6	6	0	0	1	True
CsgD	gene	STM4264	activator	5	5	0	0	1	True
SsrB	gene	STM1330	regulator	2	2	0	0	1	True
SoxS	gene	nfsA	activator	2	2	0	0	1	True
HNS	gene	hemX	repressor	1	1	0	0	1	True
HNS	gene	lon	regulator	4	4	0	0	1	True
OxyR	gene	hcp	activator	1	1	0	0	1	True
PhoP	gene	sirA	regulator	1	1	0	0	1	True
FliZ	gene	hilA	activator	17	17	0	0	1	True
Fur	gene	iroB	activator	1	0	1	0	1	True
SpvR	gene	spvA	regulator	15	15	0	0	1	True
SlyA	gene	ugtL	activator	11	5	6	0	1	True
OmpR	gene	ompR	repressor	16	16	0	0	1	True
HilD	TU	flhDC	activator	43	42	1	0	1	True
HNS	gene	sseJ	activator	1	1	0	0	1	True
PhoP	gene	pmrD	regulator	11	8	3	0	1	True
RstA	gene	feoB	regulator	2	2	0	0	1	True
CsrA	gene	argT	repressor	1	1	0	0	1	True
PmrA	gene	pmrCAB	activator	3	1	2	0	1	True
LysR	gene	spvA	regulator	1	1	0	0	1	True
YdgT	gene	pefB	repressor	1	1	0	0	1	True
PhoB	gene	virK	activator	1	0	1	0	1	True
Lrp	gene	osmY	regulator	1	1	0	0	1	True
IHF	gene	treA	activator	28	28	0	0	1	True
OmpR	gene	hilD	repressor	1	1	0	0	1	True
PmrA	gene	ssrB	regulator	8	7	1	0	1	True
RtcR	gene	malT	repressor	1	1	0	0	1	True
PhoP	gene	cdtB	regulator	2	2	0	0	1	True
TviA	gene	hilA	repressor	1	1	0	0	1	True
SlyA	gene	pgtE	regulator	1	1	0	0	1	True
FliZ	TU	flhDC	activator	6	6	0	0	1	True
CsrA	gene	rcsC	regulator	1	1	0	0	1	True
PrpR	gene	prpB	activator	3	2	1	0	1	True
CpxR	gene	lon	activator	2	2	0	0	1	True
SlyA	gene	STM3176	regulator	2	2	0	0	1	True
Sigma28	gene	flgA	repressor	3	3	0	0	1	True
RcsB	gene	narZ	regulator	2	2	0	0	1	True
Lrp	gene	traJ	regulator	8	7	1	0	1	True
PhoP	gene	mgtBC	repressor	2	0	2	0	1	True
HilD	gene	map	activator	1	0	1	0	1	True
HilA	gene	sicA	activator	3	2	1	0	1	True
NarL	gene	narL	repressor	2	2	0	0	1	True
PhoP	gene	pagO	regulator	2	1	1	0	1	True
Fur	gene	ftnA	repressor	2	2	0	0	1	True
RpoS	gene	katN	regulator	3	2	1	0	1	True
RtsA	gene	hilD	regulator	4	4	0	0	1	True
CsrA	gene	ompF	activator	1	1	0	0	1	True
SsrB	gene	ssaL	activator	1	0	1	0	1	True
PhoP	gene	ugtL	activator	42	16	26	0	1	True
CpxR	gene	scsA	regulator	1	0	1	0	1	True
RpoS	gene	STM0319	regulator	1	1	0	0	1	True
Mlc	gene	ptsG	repressor	1	1	0	0	1	True
SsrB	gene	STM3138	repressor	3	3	0	0	1	True
Lrp	gene	lrp	regulator	10	8	2	0	1	True
AcrR	gene	acrR	regulator	3	3	0	0	1	True
PhoP	gene	pmrC	activator	12	0	12	0	1	True
PhoP	gene	invB	repressor	1	0	1	0	1	True
BaeR	gene	STM3030	regulator	1	1	0	0	1	True
SirA	gene	invF	regulator	1	1	0	0	1	True
Cra	gene	ppsA	activator	1	1	0	0	1	True
CadC	gene	lysP	regulator	1	1	0	0	1	True
AraC	gene	garL	regulator	1	0	1	0	1	True
RcsB	gene	wza	activator	1	1	0	0	1	True
OmpR	gene	fliA	regulator	1	1	0	0	1	True
CpxR	gene	mdtA	regulator	2	2	0	0	1	True
PmrA	gene	STM1253	regulator	2	2	0	0	1	True
CRP	gene	malT	activator	2	2	0	0	1	True
RpoS	TU	csgBA	regulator	1	1	0	0	1	True
HilC	gene	sipC	activator	1	1	0	0	1	True
RcnR	gene	rcnA	activator	2	2	0	0	1	True
LeuO	gene	hilD	activator	1	1	0	0	1	True
PhoP	gene	ams	activator	1	0	1	0	1	True
AcrR	TU	acrAB	activator	1	1	0	0	1	True
SlyA	gene	slyA	activator	4	0	4	0	1	True
SirA	gene	barA	activator	2	1	1	0	1	True
MarR	TU	marRAB	activator	8	8	0	0	1	True
HilC	gene	hilC	repressor	1	1	0	0	1	True
CpxR	gene	clpP	activator	2	2	0	0	1	True
SoxS	gene	ompW	activator	4	2	2	0	1	True
IHF	gene	osmY	activator	28	28	0	0	1	True
HilE	gene	leuO	activator	12	12	0	0	1	True
PmrA	gene	pmrD	repressor	8	8	0	0	1	True
SlyA	gene	msgA	activator	1	0	1	0	1	True
IciA	gene	dnaA	regulator	2	2	0	0	1	True
PhoP	gene	pagP	activator	10	1	9	0	1	True
HilA	gene	sopA	activator	1	1	0	0	1	True
OmpR	gene	spiC	activator	1	1	0	0	1	True
OxyR	gene	katG	activator	5	5	0	0	1	True
LexA	gene	tum	regulator	2	2	0	0	1	True
PhoP	gene	tlpA	regulator	7	7	0	0	1	True
CsgD	gene	STM1344	repressor	12	12	0	0	1	True
YncC	gene	yciGFE	regulator	9	9	0	0	1	True
CRP	gene	hlyE	activator	22	16	6	0	1	True
CRP	gene	ansB	regulator	1	1	0	0	1	True
PmrA	gene	pbgP	activator	17	3	14	0	1	True
PhoP	gene	pcgL	activator	8	0	8	0	1	True
RpoS	gene	stiA	activator	1	1	0	0	1	True
FNR	gene	pilS	repressor	3	3	0	0	1	True
FNR	gene	pflD	regulator	1	1	0	0	1	True
PhoP	gene	hns	repressor	1	1	0	0	1	True
SlyA	gene	pagJ	activator	1	0	1	0	1	True
FlhC	gene	flhC	activator	1	1	0	0	1	True
CsrA	gene	csrA	regulator	2	2	0	0	1	True
RpoS	TU	flhDC	activator	1	1	0	0	1	True
FliZ	gene	STM3154	activator	1	0	1	0	1	True
FliA	gene	fliC	activator	1	0	1	0	1	True
CRP	TU	araBAD	regulator	2	2	0	0	1	True
LeuO	gene	hilD	repressor	1	1	0	0	1	True
RpoS	gene	osmB	regulator	3	3	0	0	1	True
StpA	gene	rpoS	repressor	19	19	0	0	1	True
HilD	gene	fur	repressor	4	4	0	0	1	True
IHF	gene	hup	repressor	4	4	0	0	1	True
Hha	gene	hilA	repressor	14	14	0	0	1	True
AcrR	TU	acrAB	repressor	5	5	0	0	1	True
RcsB	gene	sipC	regulator	1	0	1	0	1	True
RcsB	gene	rflM	regulator	4	4	0	0	1	True
OmpR	gene	rpoS	repressor	4	4	0	0	1	True
DnaA	gene	dnaA	regulator	1	1	0	0	1	True
SlyA	gene	yhjB	regulator	1	1	0	0	1	True
OmpR	gene	ompS	regulator	1	0	1	0	1	True
SdiA	gene	pefI	activator	3	1	2	0	1	True
CsgD	TU	csgBA	activator	11	10	1	0	1	True
PhoP	gene	pagJ	activator	2	0	2	0	1	True
PhoP	gene	pmrCAB	activator	3	2	1	0	1	True
PhoP	gene	spiC	activator	1	1	0	0	1	True
Lrp	gene	spvA	regulator	16	16	0	0	1	True
OmpR	gene	ompR	activator	25	17	7	1	1	True
RstA	gene	fhuF	repressor	2	2	0	0	1	True
PhoP	gene	steC	activator	1	0	1	0	1	True
SsrB	gene	STM2239	regulator	1	1	0	0	1	True
EmrR	gene	ugtL	activator	1	1	0	0	1	True
PmrA	gene	fepE	activator	1	1	0	0	1	True
HNS	gene	sopB	repressor	1	1	0	0	1	True
CsgD	gene	STM3388	activator	4	4	0	0	1	True
RamA	gene	ramA	repressor	1	1	0	0	1	True
CsgD	gene	tpx	repressor	1	1	0	0	1	True
NagC	gene	nagE	repressor	1	1	0	0	1	True
CreB	gene	pta	activator	1	1	0	0	1	True
PhoP	gene	hilC	regulator	1	1	0	0	1	True
PhoP	gene	ssrB	regulator	24	24	0	0	1	True
Rho	gene	thiM	repressor	1	1	0	0	1	True
PhoP	gene	hilD	activator	1	1	0	0	1	True
PhoP	gene	prgH	activator	1	0	1	0	1	True
AraC	gene	araC	repressor	4	3	0	1	1	True
SlyA	gene	slyA	regulator	9	6	3	0	1	True
RcsB	gene	wza	regulator	1	0	1	0	1	True
PhoP	gene	ompC	activator	1	0	1	0	1	True
HNS	TU	phoPQ	regulator	1	1	0	0	1	True
YncC	gene	yciG	regulator	1	1	0	0	1	True
OmpR-P	gene	ssrB	regulator	4	4	0	0	1	True
RpoS	gene	stiB	regulator	13	13	0	0	1	True
CRP	gene	aer	regulator	3	3	0	0	1	True
YeiE	gene	STM1697	regulator	5	5	0	0	1	True
Fur	gene	sodB	regulator	2	1	1	0	1	True
HNS	gene	ftnA	repressor	3	3	0	0	1	True
OxyR	gene	tviA	regulator	8	8	0	0	1	True
FruR	gene	icd	regulator	2	2	0	0	1	True
OmpR	gene	ompS1	regulator	9	9	0	0	1	True
RamA	gene	acrA	regulator	3	3	0	0	1	True
Fur	gene	entF	regulator	1	0	1	0	1	True
MarA	gene	ompF	repressor	1	1	0	0	1	True
CsrA	gene	csrA	activator	1	0	1	0	1	True
PhoP	gene	mgtC	activator	25	12	13	0	1	True
STM1674	gene	nadD	repressor	4	4	0	0	1	True
Lrp	gene	tcfA	activator	1	1	0	0	1	True
CRP	gene	tsr	regulator	3	3	0	0	1	True
InvF	gene	sigD	activator	3	1	2	0	1	True
MarA	gene	acrB	repressor	1	1	0	0	1	True
DksA	TU	flhDC	repressor	1	1	0	0	1	True
PmrA	gene	pmrG	regulator	1	0	1	0	1	True
RpoS	gene	csgA	repressor	4	4	0	0	1	True
Lrp	gene	tcfA	repressor	7	7	0	0	1	True
Fis	TU	flhDC	activator	1	1	0	0	1	True
RpoS	gene	bcsA	regulator	2	2	0	0	1	True
RpoS	gene	stiA	regulator	10	10	0	0	1	True
RcsA	gene	rcsC	activator	1	0	1	0	1	True
CsrA	gene	hilC	repressor	2	2	0	0	1	True
RpoS	gene	stiB	activator	1	1	0	0	1	True
SlyA	gene	virK	regulator	1	1	0	0	1	True
HilC	gene	ssaG	regulator	1	1	0	0	1	True
FliZ	gene	ydiV	regulator	1	1	0	0	1	True
RstA	gene	STM1485	regulator	8	8	0	0	1	True
DksA	gene	sufA	activator	1	0	1	0	1	True
HilC	gene	hilA	regulator	46	46	0	0	1	True
HilD	gene	rpsD	regulator	1	1	0	0	1	True
Mlc	gene	mtfA	regulator	1	1	0	0	1	True
MetR	gene	metE	activator	6	5	1	0	1	True
LeuO	gene	slrP	regulator	2	2	0	0	1	True
LuxS	gene	metE	activator	1	1	0	0	1	True
AraC	gene	srgC	regulator	1	1	0	0	1	True
PhoP	gene	tag	regulator	1	1	0	0	1	True
SsrB	gene	srfN	regulator	4	3	1	0	1	True
FNR	gene	sodA	repressor	1	1	0	0	1	True
Rho	gene	rho	activator	2	0	2	0	1	True
CueR	gene	cueR	regulator	1	0	1	0	1	True
InvF	gene	tnpA	regulator	1	1	0	0	1	True
RflM	TU	flhDC	regulator	15	15	0	0	1	True
RtsA	TU	flhDC	regulator	2	2	0	0	1	True
HdfR	gene	hdfR	regulator	4	4	0	0	1	True
LysR	gene	ilvC	regulator	5	5	0	0	1	True
SirA	gene	prgH	regulator	2	2	0	0	1	True
HilA	gene	gtgE	regulator	1	1	0	0	1	True
PhoP	gene	ptsN	activator	5	4	1	0	1	True
SsrB	gene	ompC	regulator	2	2	0	0	1	True
CRP	gene	pstS	regulator	2	2	0	0	1	True
SirA	gene	csrA	regulator	2	2	0	0	1	True
RpoS	gene	rho	activator	7	1	6	0	1	True
LexA	gene	umuC	activator	1	1	0	0	1	True
CRP	gene	hyaB	activator	4	4	0	0	1	True
PhoP	gene	sicA	activator	1	0	1	0	1	True
RcsB	gene	argR	regulator	1	1	0	0	1	True
SsrB	gene	gogB	regulator	2	2	0	0	1	True
FimZ	gene	hilA	activator	1	0	1	0	1	True
BaeR	gene	zraP	repressor	1	1	0	0	1	True
CspC	gene	cspB	activator	1	1	0	0	1	True
HilA	gene	prgH	activator	41	29	12	0	1	True
CsrA	gene	STM3611	activator	1	1	0	0	1	True
Zur	gene	znuA	activator	2	1	1	0	1	True
HilD	gene	sipB	activator	1	1	0	0	1	True
OxyR	gene	dps	activator	7	7	0	0	1	True
PhoP	gene	tlpA	repressor	5	5	0	0	1	True
InvF	gene	sinR	regulator	1	1	0	0	1	True
ArcA	gene	lldP	repressor	1	0	1	0	1	True
AraC	gene	araH	regulator	1	0	1	0	1	True
SsrB	gene	hilD	repressor	12	12	0	0	1	True
CpxR	gene	ssrB	repressor	1	1	0	0	1	True
OxyR	gene	sufA	activator	2	2	0	0	1	True
CRP	gene	hilD	repressor	1	0	1	0	1	True
SlyA	gene	narJ	regulator	1	1	0	0	1	True
CpxR	gene	csgD	regulator	1	1	0	0	1	True
ArcA	gene	arcA	activator	1	0	1	0	1	True
SdiA	gene	sdiA	activator	5	4	1	0	1	True
MarR	TU	acrAB	activator	2	2	0	0	1	True
HilC	gene	invF	repressor	1	1	0	0	1	True
Sigma28	gene	flgI	activator	1	0	1	0	1	True
HNS	gene	sifB	regulator	2	2	0	0	1	True
SprB	gene	sifB	regulator	1	1	0	0	1	True
RtsA	gene	hilA	regulator	29	29	0	0	1	True
FruR	gene	rpoS	repressor	1	1	0	0	1	True
CRP	gene	rpoS	activator	4	4	0	0	1	True
RpoS	gene	hlyE	activator	10	7	3	0	1	True
CpxR	gene	cpxR	regulator	2	2	0	0	1	True
Rho	gene	ribB	repressor	1	1	0	0	1	True
IHF	gene	hmp	activator	1	1	0	0	1	True
SprB	gene	STM1841	regulator	1	0	1	0	1	True
FNR	gene	hilA	activator	4	4	0	0	1	True
HNS	gene	ssrB	activator	2	2	0	0	1	True
PhoP	gene	mgtA	regulator	32	19	13	0	1	True
RstA	gene	fhuF	activator	1	0	1	0	1	True
RcsB	gene	tviA	activator	1	1	0	0	1	True
Fur	gene	foxA	regulator	1	0	1	0	1	True
YgaE	gene	ompF	regulator	2	2	0	0	1	True
FliZ	gene	rpsL	activator	1	1	0	0	1	True
CspE	gene	yciF	activator	9	8	1	0	1	True
FliA	gene	ycgO	activator	2	0	2	0	1	True
BaeR	gene	acrD	regulator	6	6	0	0	1	True
PhoP	gene	ydeI	regulator	24	20	4	0	1	True
SoxS	gene	acnA	activator	2	2	0	0	1	True
Hha	gene	pefB	repressor	1	1	0	0	1	True
FliA	gene	mcpC	regulator	2	2	0	0	1	True
RpoS	gene	dps	regulator	3	3	0	0	1	True
Rho	gene	tufB	regulator	7	7	0	0	1	True
RcsB	gene	ugd	activator	11	8	3	0	1	True
FlhDC	gene	STM1697	regulator	5	5	0	0	1	True
PhoP	gene	sopE2	repressor	1	1	0	0	1	True
CsrA	gene	avrA	repressor	1	1	0	0	1	True
PhoP	gene	invJ	repressor	1	0	1	0	1	True
FliA	gene	kbl	activator	1	0	1	0	1	True
LeuO	gene	rpoS	repressor	1	1	0	0	1	True
RcsB	gene	sipB	repressor	1	1	0	0	1	True
AcrR	gene	acrB	repressor	1	1	0	0	1	True
InvF	gene	dam	regulator	2	2	0	0	1	True
LexA	gene	yebG	activator	1	0	1	0	1	True
LeuO	gene	cas2	regulator	1	1	0	0	1	True
SsrB	gene	ugtL	regulator	2	2	0	0	1	True
RstA	gene	feoB	activator	6	3	3	0	1	True
FliZ	gene	hilA	repressor	2	2	0	0	1	True
SoxR	TU	acrAB	regulator	1	1	0	0	1	True
MetR	gene	metH	activator	4	3	1	0	1	True
Fis	gene	topA	repressor	2	2	0	0	1	True
FlhC	gene	cheA	repressor	36	36	0	0	1	True
HNS	gene	pefB	regulator	1	1	0	0	1	True
PhoP	gene	ugd	regulator	14	10	4	0	1	True
AraC	gene	araB	regulator	2	0	2	0	1	True
FliZ	gene	hilD	activator	1	1	0	0	1	True
AraC	gene	ppa	regulator	2	2	0	0	1	True
SsrB	gene	ssaU	activator	1	0	1	0	1	True
TviA	gene	fliC	activator	1	0	1	0	1	True
PmrA	gene	yibD	regulator	14	2	12	0	1	True
HNS	gene	lrp	repressor	4	4	0	0	1	True
CspE	gene	cspD	activator	1	1	0	0	1	True
PhoP	gene	rpoD	regulator	5	5	0	0	1	True
CysB	gene	cysJ	activator	2	2	0	0	1	True
FimZ	TU	flhDC	repressor	2	2	0	0	1	True
CsrA	gene	STM1344	repressor	10	10	0	0	1	True
HNS	gene	ugtL	regulator	11	11	0	0	1	True
HNS	TU	leuABCD	repressor	1	1	0	0	1	True
RpoS	gene	uspB	activator	1	0	1	0	1	True
InvF	gene	sopA	regulator	1	1	0	0	1	True
SoxS	gene	ssrA	activator	1	1	0	0	1	True
AraC	TU	araBAD	regulator	3	3	0	0	1	True
PhoP	gene	rcsB	activator	1	0	1	0	1	True
FhlA	gene	hypO	activator	2	2	0	0	1	True
OmpR	gene	hilC	regulator	6	6	0	0	1	True
Fis	gene	cspH	regulator	3	3	0	0	1	True
FliZ	gene	fliZ	regulator	3	3	0	0	1	True
RpoS	gene	sseB	activator	1	1	0	0	1	True
OmpR	gene	csgD	activator	5	5	0	0	1	True
MetR	gene	glyA	activator	4	4	0	0	1	True
FlhDC	gene	hilA	activator	1	0	1	0	1	True
FliA	gene	fliN	regulator	2	2	0	0	1	True
RpoS	gene	xthA	activator	1	0	1	0	1	True
PhoP	gene	pagM	regulator	1	0	1	0	1	True
DksA	gene	gnd	regulator	1	1	0	0	1	True
CpxR	TU	csgDEFG	regulator	2	2	0	0	1	True
CusR	gene	copA	regulator	1	1	0	0	1	True
PreA	gene	pmrCAB	activator	2	2	0	0	1	True
SoxS	gene	nfo	activator	4	4	0	0	1	True
NadR	gene	nadB	repressor	1	1	0	0	1	True
NtrC	gene	glnK	activator	2	2	0	0	1	True
SdiA	TU	acrAB	activator	1	1	0	0	1	True
PhoP	gene	ssaH	regulator	2	2	0	0	1	True
PhoP	gene	steA	regulator	14	14	0	0	1	True
NsrR	gene	ytfE	regulator	2	0	2	0	1	True
CsgD	TU	csgDEFG	activator	4	3	1	0	1	True
RpoS	gene	sefA	repressor	2	2	0	0	1	True
PmrA	gene	pmrC	regulator	28	1	27	0	1	True
PhoP	gene	STM2585	regulator	1	1	0	0	1	True
IlvY	gene	ilvC	activator	2	2	0	0	1	True
SpvR	gene	spvA	activator	5	5	0	0	1	True
PhoP	gene	pagN	activator	5	5	0	0	1	True
IHF	gene	spvR	regulator	2	2	0	0	1	True
IscR	gene	iscR	regulator	3	3	0	0	1	True
TviA	gene	tviA	regulator	3	1	2	0	1	True
RpoS	gene	yciE	regulator	3	2	1	0	1	True
CpxR	gene	hilA	regulator	8	8	0	0	1	True
RpoS	gene	otsA	regulator	4	4	0	0	1	True
PhoR	gene	phoE	activator	2	2	0	0	1	True
HilD	gene	hilD	regulator	31	28	2	1	1	True
InvF	gene	sopB	activator	8	7	1	0	1	True
SsrB	gene	purB	activator	1	1	0	0	1	True
RflM	TU	flhDC	activator	3	2	1	0	1	True
Crl	gene	csgB	activator	3	3	0	0	1	True
PhoP	gene	sopE2	activator	1	0	1	0	1	True
SlyA	gene	phoN	regulator	1	1	0	0	1	True
HilD	gene	prgH	regulator	1	1	0	0	1	True
SlyA	gene	glpA	activator	2	2	0	0	1	True
RpoS	gene	yciG	activator	7	2	5	0	1	True
RcsB	TU	flhDC	regulator	15	15	0	0	1	True
HNS	gene	rck	repressor	2	2	0	0	1	True
SdiA	gene	dsbA	regulator	1	0	1	0	1	True
FimZ	gene	ssrA	activator	1	0	1	0	1	True
AraC	gene	virB	activator	1	1	0	0	1	True
PhoP	gene	hilE	repressor	1	1	0	0	1	True
Sigma28	gene	fliA	repressor	2	2	0	0	1	True
PhoP	gene	invF	repressor	1	0	1	0	1	True
CsrA	gene	avrA	activator	2	2	0	0	1	True
RpoS	gene	stiC	regulator	7	7	0	0	1	True
OmpR	TU	flhDC	regulator	24	24	0	0	1	True
Fis	gene	gyrA	repressor	4	4	0	0	1	True
UhpA	gene	uhpT	activator	1	1	0	0	1	True
FNR	gene	rnc	regulator	1	1	0	0	1	True
PhoP	gene	macA	repressor	7	7	0	0	1	True
AraC	gene	araE	activator	3	2	1	0	1	True
PhoP	gene	yqjB	regulator	1	1	0	0	1	True
TyrR	gene	aroP	regulator	3	3	0	0	1	True
StpA	gene	pagC	regulator	1	1	0	0	1	True
MltC	gene	csgD	activator	1	0	1	0	1	True
SsrB	gene	hilA	repressor	23	23	0	0	1	True
RpoS	gene	tlpA	regulator	3	3	0	0	1	True
LeuO	gene	ompX	regulator	1	0	1	0	1	True
SoxS	gene	acrA	regulator	2	2	0	0	1	True
NagC	gene	chiP	regulator	6	6	0	0	1	True
LrhA	TU	flhDC	repressor	2	2	0	0	1	True
NsrR	gene	ygbA	repressor	1	0	1	0	1	True
PhoP	gene	pmrA	regulator	8	5	3	0	1	True
HilD	gene	sipC	activator	4	4	0	0	1	True
RcsB	gene	tviA	regulator	3	3	0	0	1	True
SoxS	gene	zwf	activator	4	4	0	0	1	True
PmrA	gene	lptA	regulator	1	0	1	0	1	True
FNR	gene	hilA	repressor	1	1	0	0	1	True
RpoS	gene	mlrA	regulator	1	1	0	0	1	True
CueR	gene	cueO	activator	3	3	0	0	1	True
SirA	gene	hilD	repressor	1	1	0	0	1	True
SoxS	gene	lpxC	regulator	1	1	0	0	1	True
CpxR	gene	hilA	activator	8	8	0	0	1	True
SlyA	gene	kgtP	repressor	2	2	0	0	1	True
SpvR	gene	spvABC	regulator	5	5	0	0	1	True
PhoP	gene	pmrCAB	regulator	1	0	1	0	1	True
LeuO	gene	ompC	regulator	1	1	0	0	1	True
PhoP	gene	pqaA	activator	2	0	2	0	1	True
SlyA	TU	flhDC	repressor	2	2	0	0	1	True
OmpR-P	gene	ssrA	regulator	7	7	0	0	1	True
HilD	TU	flhDC	repressor	2	2	0	0	1	True
EmrR	gene	emrB	repressor	1	1	0	0	1	True
AraC	gene	polB	regulator	6	3	3	0	1	True
RtsA	gene	invF	regulator	1	1	0	0	1	True
CspC	gene	uspA	activator	1	1	0	0	1	True
HNS	gene	ompR	repressor	10	10	0	0	1	True
Lrp	gene	fimA	repressor	3	3	0	0	1	True
StpA	gene	osmY	activator	1	0	1	0	1	True
PrpR	gene	prpBCDE	regulator	4	4	0	0	1	True
Crl	gene	crl	repressor	1	1	0	0	1	True
SoxS	gene	acrB	activator	1	1	0	0	1	True
HNS	gene	sprB	repressor	3	3	0	0	1	True
FimW	gene	fimA	repressor	1	1	0	0	1	True
SsrB	gene	sseJ	regulator	2	2	0	0	1	True
PhoP	gene	hns	activator	2	0	2	0	1	True
HilA	gene	ssaH	regulator	1	1	0	0	1	True
PhoP	gene	pagD	activator	16	11	5	0	1	True
Lrp	gene	agn43	regulator	6	6	0	0	1	True
PhoP	gene	slyA	regulator	12	7	5	0	1	True
HNS	TU	ssrAB	regulator	14	14	0	0	1	True
DksA	gene	hmp	regulator	4	4	0	0	1	True
Hu	gene	STM1530	regulator	2	2	0	0	1	True
LexA	gene	uvrB	regulator	3	0	3	0	1	True
OmpR	gene	ssrB	regulator	17	17	0	0	1	True
RpoS	gene	treA	activator	1	0	1	0	1	True
RpoS	gene	fliC	regulator	1	1	0	0	1	True
FruR	gene	crp	regulator	2	2	0	0	1	True
HNS	TU	flhDC	repressor	3	3	0	0	1	True
FimY	gene	fimA	regulator	1	1	0	0	1	True
FimZ	gene	pstS	activator	1	1	0	0	1	True
SoxS	TU	acrAB	activator	14	13	1	0	1	True
FlhC	TU	flhDC	regulator	1	1	0	0	1	True
FlhD	gene	dnaK	activator	2	2	0	0	1	True
PhoP	gene	lpxO	regulator	2	1	1	0	1	True
YqhC	gene	yqhD	activator	1	1	0	0	1	True
HNS	gene	yaeB	activator	1	1	0	0	1	True
RpoS	gene	bolA	activator	2	1	1	0	1	True
SlyA	gene	STM2589	activator	1	0	1	0	1	True
CRP	gene	araC	activator	1	1	0	0	1	True
FabR	gene	fabB	regulator	1	1	0	0	1	True
NsrR	gene	trpE	regulator	1	0	1	0	1	True
Cra	TU	cydAB	regulator	2	2	0	0	1	True
Rho	gene	gap	activator	1	0	1	0	1	True
FliA	gene	invA	activator	1	1	0	0	1	True
Fur	gene	ftnA	regulator	1	1	0	0	1	True
CsgD	gene	STM4264	regulator	4	4	0	0	1	True
CsrA	gene	hilA	activator	2	2	0	0	1	True
RstA	gene	fur	repressor	2	2	0	0	1	True
PhoP	gene	sipBCDA	activator	1	0	1	0	1	True
MarR	TU	marRAB	repressor	11	11	0	0	1	True
CRP	gene	yihU	regulator	15	15	0	0	1	True
HilA	gene	csrB	regulator	2	2	0	0	1	True
NsrR	gene	STM1808	activator	1	0	1	0	1	True
PhoP	gene	tolB	activator	2	0	2	0	1	True
PhoP	gene	mgtB	activator	1	0	1	0	1	True
SsrB	gene	sseJ	activator	1	1	0	0	1	True
HilC	gene	prgH	regulator	1	1	0	0	1	True
PhoP	gene	iacP	activator	1	0	1	0	1	True
PhoR	gene	phoR	regulator	1	1	0	0	1	True
PhoP	gene	mig-14	regulator	9	4	5	0	1	True
NsrR	gene	yoaG	regulator	1	0	1	0	1	True
CsgD	gene	bapA	activator	4	2	2	0	1	True
LexA	gene	uvrD	regulator	1	0	1	0	1	True
LeuO	gene	cse2	activator	5	5	0	0	1	True
HilD	gene	ssrA	regulator	1	1	0	0	1	True
EmrR	TU	emrAB	repressor	1	1	0	0	1	True
StpA	gene	ompS1	regulator	6	6	0	0	1	True
SsrB	gene	sifA	activator	9	9	0	0	1	True
LsrR	gene	luxS	repressor	1	1	0	0	1	True
LeuO	gene	hilC	repressor	4	4	0	0	1	True
SsrB	gene	sifB	activator	4	3	1	0	1	True
LysR	gene	lysA	activator	1	1	0	0	1	True
RpoS	gene	hupB	repressor	3	3	0	0	1	True
Lrp	gene	fimZ	repressor	2	2	0	0	1	True
Sigma28	gene	lacZ	activator	3	0	3	0	1	True
SsrB	gene	srfM	regulator	1	0	1	0	1	True
CsrA	gene	aceB	regulator	1	1	0	0	1	True
SlyA	gene	rpoS	activator	1	0	1	0	1	True
CRP	TU	flhDC	activator	4	4	0	0	1	True
PhoP	gene	yoaE	activator	2	2	0	0	1	True
CsgD	gene	STM3611	repressor	6	6	0	0	1	True
PhoP	gene	lacZ	activator	4	0	4	0	1	True
PhoP	gene	yrbL	activator	4	0	4	0	1	True
Fur	gene	entE	regulator	2	0	2	0	1	True
HilD	gene	sipA	activator	4	4	0	0	1	True
HNS	gene	hilC	regulator	6	6	0	0	1	True
SsrB	gene	sseI	activator	6	6	0	0	1	True
HilD	TU	ssrAB	repressor	13	13	0	0	1	True
PgtA	gene	pgtP	activator	1	1	0	0	1	True
SlyA	gene	pagP	activator	1	0	1	0	1	True
FliZ	gene	hilA	regulator	4	4	0	0	1	True
RpoS	TU	acrAB	activator	3	3	0	0	1	True
CsgD	gene	STM2123	regulator	2	2	0	0	1	True
SsrB	gene	gogB	activator	1	1	0	0	1	True
FimY	gene	fimW	activator	1	1	0	0	1	True
PmrA	gene	STM1269	activator	2	0	2	0	1	True
HilE	gene	sirA	regulator	1	1	0	0	1	True
PhoP	gene	mgrB	regulator	1	0	1	0	1	True
DksA	gene	feoB	activator	1	0	1	0	1	True
LysR	gene	STM3120	regulator	1	1	0	0	1	True
DksA	gene	ssrA	activator	1	1	0	0	1	True
SsrB	gene	slyA	regulator	1	1	0	0	1	True
MarA	TU	flhDC	activator	3	3	0	0	1	True
SlyA	gene	mig-14	activator	1	0	1	0	1	True
IscR	gene	hilD	regulator	4	4	0	0	1	True
PhoP	gene	slyB	regulator	5	4	1	0	1	True
SirA	gene	flgA	activator	1	0	1	0	1	True
SlyA	gene	himD	activator	1	1	0	0	1	True
SsrB	gene	ssrB	regulator	8	6	2	0	1	True
CRP	gene	fur	activator	2	1	1	0	1	True
CRP	gene	ompR	activator	1	1	0	0	1	True
NsrR	gene	hmp	regulator	2	1	1	0	1	True
FlhDC	gene	fliC	repressor	4	4	0	0	1	True
FlhD	gene	STM1697	repressor	3	3	0	0	1	True
RtsA	gene	hilA	activator	54	54	0	0	1	True
RpoS	gene	hlyE	regulator	14	14	0	0	1	True
RcsB	gene	rcsC	activator	20	17	3	0	1	True
Fur	gene	hilC	activator	1	0	1	0	1	True
CsrA	gene	glpF	activator	1	1	0	0	1	True
RpoS	gene	lacZ	activator	4	1	3	0	1	True
YdcI	gene	acnB	repressor	1	1	0	0	1	True
SlyA	gene	ydhI	repressor	1	1	0	0	1	True
SoxR	gene	soxR	activator	1	1	0	0	1	True
PhoP	gene	cobB	regulator	1	0	1	0	1	True
SsrB	TU	ssrAB	repressor	1	1	0	0	1	True
SsrB	gene	sspH2	activator	2	0	2	0	1	True
FlhDC	gene	flgM	regulator	1	1	0	0	1	True
MarA	gene	marA	regulator	1	0	0	1	1	True
RpoS	gene	hns	activator	8	5	3	0	1	True
CysB	gene	cysC	activator	1	0	1	0	1	True
HNS	gene	phoP	repressor	3	3	0	0	1	True
RpoS	gene	osmY	regulator	3	2	1	0	1	True
PmrA	gene	basS	activator	1	0	1	0	1	True
CsgD	gene	STM4264	repressor	8	8	0	0	1	True
CsrA	gene	cydA	activator	2	2	0	0	1	True
RcsB	gene	fepE	regulator	1	1	0	0	1	True
Rho	gene	ribB	activator	8	0	8	0	1	True
IHF	gene	hilA	activator	1	1	0	0	1	True
EmrR	TU	emrAB	regulator	4	4	0	0	1	True
CpxR	TU	phoPQ	regulator	8	8	0	0	1	True
OmpR	gene	hilA	activator	2	2	0	0	1	True
CpxR	gene	lacZ	regulator	1	0	1	0	1	True
HilD	gene	leuO	activator	2	2	0	0	1	True
SdiA	gene	flhC	regulator	1	1	0	0	1	True
FliA	gene	STM1697	regulator	1	1	0	0	1	True
RpoS	gene	bapA	regulator	1	0	1	0	1	True
SoxS	gene	acnA	regulator	1	1	0	0	1	True
CspE	gene	cspE	activator	1	0	1	0	1	True
SlyA	gene	slrP	regulator	1	1	0	0	1	True
SsrB	gene	flhD	repressor	1	1	0	0	1	True
InvF	gene	lacZ	regulator	1	0	1	0	1	True
SdiA	gene	STM1554	regulator	1	1	0	0	1	True
FNR	gene	sodCII	repressor	1	1	0	0	1	True
HilD	gene	hilE	activator	10	10	0	0	1	True
SoxS	gene	acrB	repressor	1	1	0	0	1	True
Rho	gene	rhoL	activator	2	0	2	0	1	True
RhaS	TU	rhaBAD	activator	1	1	0	0	1	True
FabR	gene	yqfA	regulator	3	3	0	0	1	True
RstA	gene	feoA	activator	13	7	6	0	1	True
HilD	gene	sinR	activator	5	5	0	0	1	True
LeuO	gene	envR	activator	1	1	0	0	1	True
FlhDC	gene	yhjH	regulator	1	0	1	0	1	True
MarA	gene	asmA	regulator	1	0	1	0	1	True
PhoP	gene	hilA	regulator	21	20	1	0	1	True
YdcR	gene	srfN	repressor	1	1	0	0	1	True
Crl	gene	adrA	activator	8	8	0	0	1	True
CsgD	gene	bcsZ	activator	1	1	0	0	1	True
OmpR-P	gene	ssrA	repressor	1	1	0	0	1	True
FliA	gene	rck	activator	1	0	1	0	1	True
CsrA	gene	soxS	repressor	2	2	0	0	1	True
BaeR	gene	mdtA	regulator	4	4	0	0	1	True
CysB	gene	cysM	regulator	1	1	0	0	1	True
Fis	gene	dps	regulator	2	2	0	0	1	True
SirA	gene	hilC	activator	10	10	0	0	1	True
Fur	gene	iroA	regulator	1	0	1	0	1	True
RstA	gene	rcsB	activator	2	2	0	0	1	True
SlyA	gene	spoT	activator	2	0	2	0	1	True
NarL	gene	rcsA	regulator	1	1	0	0	1	True
MarR	gene	marA	repressor	7	7	0	0	1	True
CRP	gene	rpoS	regulator	12	12	0	0	1	True
LuxS	gene	cas	regulator	2	0	2	0	1	True
LeuO	gene	ompS2	repressor	5	5	0	0	1	True
GlrR	gene	glrR	activator	1	1	0	0	1	True
PocR	gene	hilA	activator	2	2	0	0	1	True
HNS	gene	rpmB	regulator	1	1	0	0	1	True
CsgD	gene	adrA	repressor	1	1	0	0	1	True
PhoP	gene	crp	repressor	1	1	0	0	1	True
SsrB	gene	sseL	activator	2	2	0	0	1	True
SsrB	gene	phoP	activator	10	10	0	0	1	True
MarA	gene	acrB	activator	2	2	0	0	1	True
RcsB	gene	nlpD	regulator	1	1	0	0	1	True
CsrA	gene	sirA	repressor	1	1	0	0	1	True
Sigma32	gene	rpoE	activator	1	1	0	0	1	True
OmpR	gene	gltA	repressor	6	5	1	0	1	True
LeuO	gene	ompS2	activator	29	27	2	0	1	True
RpoS	gene	wraB	regulator	1	1	0	0	1	True
HilA	gene	phoH	regulator	1	1	0	0	1	True
HilD	gene	sopE	regulator	1	1	0	0	1	True
NarP	gene	narP	regulator	1	1	0	0	1	True
CsrA	gene	hilD	repressor	27	27	0	0	1	True
Lrp	gene	fimA	activator	1	1	0	0	1	True
HilA	gene	map	activator	3	0	3	0	1	True
SsrB	TU	ssrAB	regulator	2	1	1	0	1	True
CsrA	gene	hilD	activator	16	16	0	0	1	True
NsrR	gene	hmpA	repressor	4	3	1	0	1	True
PmrA	gene	dgoA	regulator	11	0	11	0	1	True
RpoS	gene	stiC	activator	3	2	1	0	1	True
RtcR	gene	xylE	activator	6	6	0	0	1	True
LexA	gene	cib	repressor	1	1	0	0	1	True
OmpR	TU	ssrAB	repressor	4	4	0	0	1	True
CRP	gene	stiC	regulator	2	2	0	0	1	True
HNS	gene	srfN	regulator	1	1	0	0	1	True
CRP	gene	stiA	regulator	2	2	0	0	1	True
SprB	gene	sipC	regulator	1	1	0	0	1	True
HilA	gene	slrP	regulator	1	1	0	0	1	True
MlrA	gene	mlrA	regulator	4	4	0	0	1	True
HNS	gene	leuO	repressor	14	14	0	0	1	True
HilD	gene	fliZ	regulator	6	6	0	0	1	True
PhoP	gene	phoQ	activator	14	4	10	0	1	True
DksA	gene	cysD	activator	1	0	1	0	1	True
DeoR	gene	aphA	repressor	2	2	0	0	1	True
FliZ	gene	fliZ	repressor	2	2	0	0	1	True
PhoP	gene	iraP	activator	4	3	1	0	1	True
HilA	gene	siiA	activator	1	1	0	0	1	True
NagC	gene	galR	repressor	1	1	0	0	1	True
RstA	gene	csgD	repressor	2	2	0	0	1	True
RpoS	gene	psiF	regulator	1	1	0	0	1	True
CsrA	gene	rpoS	repressor	3	3	0	0	1	True
SoxS	TU	marRAB	activator	10	9	1	0	1	True
HilA	gene	STM3216	regulator	2	2	0	0	1	True
RcsA	gene	tolB	activator	1	0	1	0	1	True
HilA	gene	lacZ	activator	1	0	1	0	1	True
NsrR	gene	hcp	activator	1	1	0	0	1	True
PmrA	gene	pmrHFIJKLM	activator	5	2	3	0	1	True
YeiE	gene	STM1697	repressor	10	10	0	0	1	True
LexA	gene	dinI	activator	1	0	1	0	1	True
Fis	gene	spiR	regulator	1	1	0	0	1	True
HilA	gene	dam	regulator	2	2	0	0	1	True
SsrB	gene	hilA	regulator	3	2	1	0	1	True
SlyA	gene	fruK	activator	4	4	0	0	1	True
PhoP	gene	emrR	regulator	1	1	0	0	1	True
SoxS	gene	fumC	activator	4	4	0	0	1	True
HilD	gene	orgBC	activator	1	1	0	0	1	True
PhoP	gene	ssrB	activator	25	17	8	0	1	True
HilD	gene	sipC	regulator	1	0	1	0	1	True
InvF	gene	lpxR	regulator	1	1	0	0	1	True
HilA	gene	invF	regulator	27	25	2	0	1	True
CsrA	gene	yciG	repressor	1	1	0	0	1	True
CsgD	gene	yhjH	repressor	1	1	0	0	1	True
SirA	gene	hilD	regulator	5	5	0	0	1	True
FNR	gene	metE	repressor	4	4	0	0	1	True
PhoP	gene	macA	regulator	6	6	0	0	1	True
Lrp	gene	hilA	repressor	3	3	0	0	1	True
OmpR	gene	ompF	regulator	14	11	3	0	1	True
Fis	gene	hilD	activator	1	1	0	0	1	True
AraC	gene	invF	regulator	2	2	0	0	1	True
CRP	gene	parE	repressor	1	1	0	0	1	True
RpoS	gene	hfq	activator	1	1	0	0	1	True
CadC	gene	ompR	repressor	7	7	0	0	1	True
SsrB	gene	srfA	regulator	1	0	1	0	1	True
OxyR	gene	mntH	activator	1	1	0	0	1	True
OxyR	gene	lacZ	regulator	2	2	0	0	1	True
SlyA	gene	gtgE	activator	1	1	0	0	1	True
Sigma28	gene	flgH	activator	1	0	1	0	1	True
OmpR	gene	ssrA	activator	25	22	3	0	1	True
HNS	gene	hilA	repressor	22	22	0	0	1	True
TtrR	TU	ttrBCA	activator	3	3	0	0	1	True
SlyA	gene	gipA	activator	1	0	1	0	1	True
PmrA	gene	rpoN	regulator	1	0	1	0	1	True
LeuO	gene	cse1	regulator	2	2	0	0	1	True
StpA	gene	ompS1	activator	22	0	22	0	1	True
RcsA	gene	rcsA	activator	7	2	5	0	1	True
SlyA	gene	spiR	regulator	1	1	0	0	1	True
FliA	gene	fliZ	repressor	1	1	0	0	1	True
Fis	gene	fis	activator	1	1	0	0	1	True
LeuO	gene	ompX	activator	3	0	3	0	1	True
AcrR	gene	acrA	repressor	1	1	0	0	1	True
NsrR	gene	marA	regulator	1	0	1	0	1	True
SirA	gene	sopB	activator	8	5	3	0	1	True
RpoS	gene	yciF	regulator	1	1	0	0	1	True
HilC	gene	dapZ	regulator	2	1	1	0	1	True
LsrR	gene	invF	repressor	2	2	0	0	1	True
MarA	gene	micF	activator	5	5	0	0	1	True
CsrA	gene	btuE	repressor	2	2	0	0	1	True
HNS	gene	assT	regulator	2	2	0	0	1	True
RpoS	TU	flhDC	regulator	6	6	0	0	1	True
PhoP	gene	rrs	activator	1	0	1	0	1	True
CpxR	gene	yoaE	activator	3	3	0	0	1	True
NsrR	gene	nsrR	activator	2	1	1	0	1	True
LexA	gene	ybfE	regulator	1	0	1	0	1	True
SsrB	gene	csgD	regulator	9	8	1	0	1	True
NhaR	gene	sdiA	repressor	1	1	0	0	1	True
HilC	gene	hilA	activator	51	50	1	0	1	True
ArgR	gene	argR	regulator	1	1	0	0	1	True
RstA	gene	leuS	activator	1	0	1	0	1	True
CRP	gene	gatY	regulator	1	1	0	0	1	True
DksA	gene	livJ	activator	2	1	1	0	1	True
OmpR	gene	ssrB	repressor	1	1	0	0	1	True
CpxR	gene	acrB	regulator	2	2	0	0	1	True
PhoP	gene	mgtBC	regulator	2	2	0	0	1	True
MntR	gene	mntH	activator	1	0	1	0	1	True
Mlc	gene	hilE	regulator	15	15	0	0	1	True
PhoP	gene	yqjA	activator	3	0	3	0	1	True
CpxR	gene	csgD	repressor	6	6	0	0	1	True
CadC	gene	STM4538	repressor	3	3	0	0	1	True
PmrA	gene	pmrG	activator	3	1	2	0	1	True
HNS	gene	siiA	repressor	1	1	0	0	1	True
OxyR	gene	katE	activator	4	4	0	0	1	True
FlhC	gene	fliA	regulator	1	1	0	0	1	True
RcsA	gene	invG	repressor	2	2	0	0	1	True
NsrR	gene	soxR	regulator	1	0	1	0	1	True
CpxR	gene	cpxR	activator	3	3	0	0	1	True
HNS	gene	hilD	activator	3	3	0	0	1	True
HdfR	gene	stdA	regulator	2	2	0	0	1	True
SlyA	gene	sopE2	repressor	3	3	0	0	1	True
AraC	gene	garR	regulator	1	0	1	0	1	True
RpoS	gene	ogt	regulator	1	1	0	0	1	True
HNS	gene	ymdF	regulator	4	4	0	0	1	True
HilD	gene	hilC	repressor	1	1	0	0	1	True
PmrA	gene	STM0459	activator	2	1	1	0	1	True
MarA	TU	marRAB	regulator	3	3	0	0	1	True
RcsB	gene	csgD	repressor	1	1	0	0	1	True
Fis	gene	gyrB	regulator	6	6	0	0	1	True
RpoS	gene	cpxR	activator	1	1	0	0	1	True
HilD	gene	slrP	regulator	3	3	0	0	1	True
CueR	gene	zntA	regulator	2	0	2	0	1	True
CsgD	gene	hfq	activator	3	3	0	0	1	True
FliA	gene	STM1344	regulator	1	1	0	0	1	True
CRP	gene	sirA	regulator	7	7	0	0	1	True
BaeR	gene	acrA	regulator	6	6	0	0	1	True
Crl	gene	crl	activator	1	1	0	0	1	True
PhoP	gene	hilE	activator	1	1	0	0	1	True
HNS	gene	prgH	activator	1	1	0	0	1	True
FNR	gene	tag	regulator	1	1	0	0	1	True
RpoS	gene	katE	activator	7	2	5	0	1	True
CRP	gene	glpF	activator	2	1	1	0	1	True
HilD	gene	gtgE	regulator	18	18	0	0	1	True
RstA	gene	asr	regulator	1	0	1	0	1	True
RcsB	gene	wzzB	activator	1	0	1	0	1	True
Fis	gene	rpoA	repressor	1	1	0	0	1	True
FlhD	gene	fliA	regulator	1	1	0	0	1	True
RtcR	gene	STM0571	activator	2	2	0	0	1	True
PhoP	gene	STM1485	activator	1	0	1	0	1	True
SdiA	TU	PSLT025	regulator	1	0	1	0	1	True
CRP	gene	ptsN	regulator	5	5	0	0	1	True
LeuO	gene	tpx	repressor	4	4	0	0	1	True
RstA	gene	feoA	regulator	2	2	0	0	1	True
Lrp	gene	invF	repressor	2	2	0	0	1	True
PhoB	gene	phoB	regulator	1	1	0	0	1	True
FlhDC	gene	hilA	regulator	1	1	0	0	1	True
RcsB	gene	invG	repressor	1	1	0	0	1	True
HilC	gene	slrP	activator	3	3	0	0	1	True
Fis	gene	hns	activator	1	1	0	0	1	True
RcsA	gene	ugd	activator	5	4	1	0	1	True
PmrA	gene	yjdB	activator	1	0	1	0	1	True
CRP	TU	flhDC	regulator	10	10	0	0	1	True
RcsB	gene	entF	regulator	2	2	0	0	1	True
FimZ	gene	fimA	activator	8	7	1	0	1	True
Fur	gene	sodB	activator	1	0	1	0	1	True
OmpR	gene	atpB	activator	3	3	0	0	1	True
NsrR	gene	hcp	regulator	1	0	1	0	1	True
LacI	gene	lacI	regulator	3	2	1	0	1	True
HNS	gene	ompR	activator	2	2	0	0	1	True
FimY	gene	fimZ	regulator	2	2	0	0	1	True
DnaA	gene	seqA	regulator	2	2	0	0	1	True
MlrA	TU	csgDEFG	regulator	2	2	0	0	1	True
RpoS	gene	sipC	activator	4	1	3	0	1	True
FimZ	TU	flhDC	regulator	1	1	0	0	1	True
Fur	gene	fur	repressor	2	0	2	0	1	True
CRP	gene	parC	repressor	1	1	0	0	1	True
PhoP	gene	hilA	activator	8	5	3	0	1	True
SoxR	gene	acnA	activator	2	2	0	0	1	True
CsgD	gene	STM3388	repressor	4	4	0	0	1	True
MetR	gene	metE	repressor	1	1	0	0	1	True
PhoP	gene	fliA	repressor	2	0	2	0	1	True
DksA	gene	sipC	regulator	2	2	0	0	1	True
Fur	gene	bfr	regulator	1	1	0	0	1	True
PhoP	gene	virK	repressor	2	1	1	0	1	True
HilD	gene	mcpC	repressor	1	1	0	0	1	True
Lrp	TU	ilvIH	regulator	3	2	1	0	1	True
AraC	gene	srgB	regulator	1	1	0	0	1	True
RcsB	gene	hilA	repressor	3	3	0	0	1	True
CpxR	gene	STM1530	activator	12	12	0	0	1	True
FlhDC	gene	clpX	activator	1	1	0	0	1	True
PhoP	TU	flhDC	repressor	5	5	0	0	1	True
HNS	gene	ompS1	repressor	11	11	0	0	1	True
EutR	gene	ssrB	regulator	9	9	0	0	1	True
HilD	gene	dam	regulator	1	1	0	0	1	True
LexA	gene	recN	activator	1	0	1	0	1	True
CRP	gene	acnA	regulator	1	1	0	0	1	True
PspC	gene	bla	regulator	2	2	0	0	1	True
Cra	gene	csgD	regulator	2	2	0	0	1	True
FNR	gene	acnA	repressor	1	1	0	0	1	True
RcsB	gene	asr	regulator	1	1	0	0	1	True
RcdA	gene	csgD	regulator	2	2	0	0	1	True
CysB	gene	cysN	activator	1	0	1	0	1	True
LeuO	gene	hilE	repressor	3	3	0	0	1	True
IHF	gene	ssrA	regulator	1	1	0	0	1	True
Lrp	gene	argR	regulator	1	1	0	0	1	True
Fur	gene	sipB	regulator	3	0	3	0	1	True
HilE	gene	hilD	activator	1	0	1	0	1	True
HilD	gene	dsbA	repressor	3	3	0	0	1	True
CpxR	gene	scsB	activator	1	0	1	0	1	True
CspC	gene	cspD	activator	1	1	0	0	1	True
FliA	gene	fliA	regulator	3	2	1	0	1	True
Sigma70	TU	flhDC	activator	1	0	1	0	1	True
InvF	gene	tnpA	repressor	2	2	0	0	1	True
RcsB	gene	hilA	regulator	1	0	1	0	1	True
AraC	TU	araBAD	repressor	3	3	0	0	1	True
SlyA	gene	virK	activator	1	0	1	0	1	True
Zur	gene	znuA	regulator	2	1	1	0	1	True
InvF	gene	gtgE	regulator	1	1	0	0	1	True
RcsB	gene	ytfK	regulator	1	1	0	0	1	True
OmpR	gene	cas	activator	1	0	1	0	1	True
SsrB	gene	pmrA	activator	1	0	1	0	1	True
RcsB	gene	dps	regulator	5	4	1	0	1	True
YdgT	gene	ssrA	regulator	1	1	0	0	1	True
TorR	TU	torCAD	activator	1	1	0	0	1	True
Fur	gene	bfr	repressor	4	2	2	0	1	True
LexA	gene	ant	regulator	1	1	0	0	1	True
RcsA	TU	flhDC	regulator	1	1	0	0	1	True
RpoS	gene	spvR	regulator	2	2	0	0	1	True
OmpR	gene	spiC	regulator	1	1	0	0	1	True
Fis	gene	hupB	regulator	2	2	0	0	1	True
SsrB	gene	sifB	regulator	2	2	0	0	1	True
PhoP	gene	slsA	activator	1	0	1	0	1	True
RpoS	gene	rho	regulator	1	1	0	0	1	True
SsrB	gene	ssrA	regulator	5	5	0	0	1	True
SoxS	gene	fpr	regulator	1	1	0	0	1	True
SsrB	gene	purB	regulator	3	3	0	0	1	True
PmrA	gene	ssrB	activator	5	1	4	0	1	True
HNS	TU	flhDC	regulator	10	10	0	0	1	True
CpxR	gene	marA	regulator	1	1	0	0	1	True
Crl	gene	bcsA	activator	1	1	0	0	1	True
PhoP	gene	slyA	activator	11	7	4	0	1	True
SirA	gene	csrB	regulator	5	5	0	0	1	True
PhoP	gene	ssrB	repressor	3	3	0	0	1	True
RcsB	gene	narZ	repressor	1	1	0	0	1	True
RpoS	gene	osmC	regulator	3	3	0	0	1	True
HNS	gene	hilC	repressor	1	1	0	0	1	True
RcsA	gene	rcsA	repressor	5	5	0	0	1	True
PhoP	gene	phoP	regulator	43	15	28	0	1	True
SoxS	gene	tolC	activator	4	4	0	0	1	True
MarA	gene	rob	regulator	4	4	0	0	1	True
RtsB	TU	flhDC	regulator	5	5	0	0	1	True
RtcR	gene	rtcB	activator	12	12	0	0	1	True
OmpR	gene	atpB	repressor	1	1	0	0	1	True
StpA	gene	ugtL	repressor	1	0	1	0	1	True
HilA	gene	sipC	repressor	1	1	0	0	1	True
HNS	gene	rck	regulator	1	1	0	0	1	True
SsrB	gene	STM3216	repressor	3	3	0	0	1	True
OmpR-P	gene	csgD	activator	1	1	0	0	1	True
HilC	TU	ssrAB	regulator	1	1	0	0	1	True
AraC	gene	garD	regulator	1	0	1	0	1	True
HNS	gene	sifA	repressor	1	1	0	0	1	True
HNS	gene	csgD	repressor	4	4	0	0	1	True
CadC	gene	STM4538	activator	5	5	0	0	1	True
CRP	gene	sirA	activator	4	4	0	0	1	True
HilA	gene	invF	activator	58	33	25	0	1	True
SpvR	gene	spvABCD	regulator	3	3	0	0	1	True
HilD	gene	mcpC	regulator	3	3	0	0	1	True
CsgD	gene	csgD	repressor	2	2	0	0	1	True
SlyA	gene	ssrA	regulator	9	9	0	0	1	True
CueR	gene	cueR	activator	1	0	1	0	1	True
CsrA	gene	spvR	repressor	2	2	0	0	1	True
HilA	gene	prgH	repressor	1	1	0	0	1	True
PhoP	gene	cpxP	activator	1	0	1	0	1	True
LexA	gene	dinF	repressor	1	1	0	0	1	True
PhoB	gene	hilD	regulator	2	2	0	0	1	True
MarA	gene	fliC	repressor	8	8	0	0	1	True
HilC	gene	sprB	activator	3	3	0	0	1	True
SsrB	gene	ugtL	activator	17	13	4	0	1	True
RpoS	TU	marRAB	activator	1	1	0	0	1	True
RpoS	gene	phoP	regulator	1	0	1	0	1	True
LysR	gene	STM2372	regulator	1	1	0	0	1	True
PhoP	gene	prgI	repressor	2	1	1	0	1	True
HilC	gene	hilC	regulator	5	5	0	0	1	True
FNR	gene	nirB	activator	1	1	0	0	1	True
STM2748	gene	pgtP	regulator	6	6	0	0	1	True
CsrA	gene	aceA	regulator	1	1	0	0	1	True
MntR	gene	cdtB	regulator	4	4	0	0	1	True
CysB	gene	cysK	regulator	7	6	1	0	1	True
PhoB	gene	phoH	activator	1	0	1	0	1	True
HilA	gene	sipB	regulator	2	1	1	0	1	True
FNR	gene	hns	regulator	1	1	0	0	1	True
LeuO	gene	cse1	activator	1	1	0	0	1	True
NsrR	gene	yjbE	regulator	1	0	1	0	1	True
RpoS	gene	sodCII	regulator	2	1	1	0	1	True
OxyR	gene	agn43	activator	5	1	4	0	1	True
CueR	gene	copA	regulator	10	7	3	0	1	True
RpoS	gene	dctA	repressor	1	1	0	0	1	True
SsrB	gene	lacZ	activator	1	1	0	0	1	True
SlyA	TU	ssrAB	regulator	6	6	0	0	1	True
FimZ	gene	fimA	regulator	15	15	0	0	1	True
SsrB	TU	flhDC	repressor	4	4	0	0	1	True
YdcR	gene	ydcR	regulator	4	1	3	0	1	True
LysR	gene	tdcA	activator	1	1	0	0	1	True
NsrR	gene	norV	regulator	1	1	0	0	1	True
PhoP	gene	invI	repressor	1	0	1	0	1	True
OmpR-P	gene	ompS2	regulator	2	2	0	0	1	True
IHF	gene	dps	activator	35	34	1	0	1	True
CsrA	gene	STM1344	regulator	10	10	0	0	1	True
NtrC	gene	glnL	activator	2	2	0	0	1	True
Fur	gene	sipC	regulator	3	0	3	0	1	True
FruR	gene	pps	regulator	2	2	0	0	1	True
CsrA	gene	csrB	regulator	3	3	0	0	1	True
CspE	gene	uspA	activator	1	1	0	0	1	True
SirA	TU	flhDC	repressor	1	1	0	0	1	True
Fis	gene	gyrB	repressor	4	4	0	0	1	True
HNS	gene	phoP	regulator	2	2	0	0	1	True
HNS	gene	pagC	activator	8	8	0	0	1	True
HU	gene	hilA	regulator	1	1	0	0	1	True
HNS	gene	hemX	activator	1	1	0	0	1	True
PmrA	gene	ssaG	regulator	3	3	0	0	1	True
Fur	gene	fur	regulator	1	0	1	0	1	True
RstA	gene	STM1485	activator	12	8	4	0	1	True
SlyA	gene	sopD2	regulator	1	1	0	0	1	True
CsrA	gene	pocR	activator	1	1	0	0	1	True
PmrA	gene	STM4568	activator	2	1	1	0	1	True
AcrR	gene	acrB	activator	4	4	0	0	1	True
LexA	gene	lexA	activator	15	13	2	0	1	True
HilA	gene	sinR	regulator	1	1	0	0	1	True
RcsB	gene	leuO	activator	3	3	0	0	1	True
FliA	gene	STM1300	activator	2	0	2	0	1	True
LeuO	gene	cse1	repressor	1	1	0	0	1	True
YdcR	gene	srfN	regulator	8	8	0	0	1	True
RpoS	gene	yibJ	regulator	1	1	0	0	1	True
Fur	gene	entE	activator	1	1	0	0	1	True
RcsB	TU	flhDC	activator	2	0	2	0	1	True
PhoP	gene	sseL	activator	20	20	0	0	1	True
RtcR	gene	rtcR	activator	2	2	0	0	1	True
CRP	gene	malT	regulator	2	2	0	0	1	True
RamA	gene	acrB	activator	8	8	0	0	1	True
Fis	gene	hilD	regulator	1	1	0	0	1	True
DksA	gene	sifA	activator	1	1	0	0	1	True
Zur	gene	zinT	activator	2	1	1	0	1	True
RamA	gene	hmp	repressor	2	2	0	0	1	True
CRP	gene	gatR	regulator	1	1	0	0	1	True
TrpR	gene	argR	regulator	1	1	0	0	1	True
PhoP	gene	mgtCBR	regulator	4	4	0	0	1	True
PhoP	gene	pagP	regulator	6	0	6	0	1	True
LeuO	gene	lacZ	activator	1	1	0	0	1	True
HilD	gene	slyA	activator	2	2	0	0	1	True
FliA	gene	lacZ	activator	3	0	3	0	1	True
FliA	gene	ygaC	activator	1	0	1	0	1	True
CpxR	gene	pmrAB	regulator	6	6	0	0	1	True
PmrA	gene	yrbL	activator	1	0	1	0	1	True
StpA	gene	pagC	activator	1	0	1	0	1	True
PhoP	gene	pbgP	activator	5	1	4	0	1	True
FliA	gene	sdiA	activator	8	0	8	0	1	True
HNS	gene	hdfR	activator	1	1	0	0	1	True
LeuO	gene	leuO	regulator	3	3	0	0	1	True
FliZ	gene	ydiV	repressor	26	26	0	0	1	True
GatR	gene	gatR	regulator	1	1	0	0	1	True
SirA	gene	csrB	activator	14	13	1	0	1	True
CpxR	gene	scsA	activator	2	0	2	0	1	True
STM3602	gene	phnA	regulator	4	4	0	0	1	True
FNR	gene	hlyE	regulator	10	10	0	0	1	True
Hha	gene	pefA	regulator	1	1	0	0	1	True
HNS	gene	srfN	repressor	8	8	0	0	1	True
RpoS	gene	fis	repressor	3	3	0	0	1	True
PmrA	gene	STM4118	activator	3	0	3	0	1	True
HilC	gene	dsbA	activator	2	2	0	0	1	True
RcsB	gene	rcsB	repressor	2	2	0	0	1	True
BarA-SirA	gene	hilA	activator	1	1	0	0	1	True
AraC	TU	araBAD	activator	3	3	0	0	1	True
PhoP	gene	pgtE	regulator	3	2	1	0	1	True
RcsA	gene	rcsB	activator	4	1	3	0	1	True
AcrR	TU	marRAB	regulator	1	1	0	0	1	True
PmrA	gene	pmrCAB	regulator	4	2	2	0	1	True
Sigma28	gene	fliB	activator	1	0	1	0	1	True
PmrA	gene	tolB	regulator	3	0	3	0	1	True
CRP	gene	aspA	activator	1	1	0	0	1	True
OmpR-P	gene	ssrA	activator	3	3	0	0	1	True
SlyA	gene	narH	regulator	1	1	0	0	1	True
PocR	gene	crp	activator	2	1	1	0	1	True
OmpR	gene	rstA	activator	1	0	1	0	1	True
OmpR	gene	rcsB	regulator	2	2	0	0	1	True
HilD	gene	hns	repressor	1	1	0	0	1	True
RpoS	gene	sptP	activator	1	1	0	0	1	True
CRP	gene	lacZ	regulator	1	1	0	0	1	True
PmrA	gene	dgoA	activator	4	2	2	0	1	True
CRP	gene	mglA	activator	1	0	1	0	1	True
Lrp	gene	fimA	regulator	3	2	1	0	1	True
HNS	TU	csgDEFG	regulator	2	2	0	0	1	True
CsrA	gene	avrA	regulator	9	9	0	0	1	True
LeuO	gene	lacZ	regulator	1	1	0	0	1	True
RpoS	gene	STM1513	regulator	2	2	0	0	1	True
RtsA	gene	slrP	activator	8	8	0	0	1	True
FruR	gene	acrD	regulator	2	2	0	0	1	True
CspE	gene	fliA	regulator	1	1	0	0	1	True
FimW	gene	fimA	regulator	5	5	0	0	1	True
TyrR	gene	aroP	activator	6	6	0	0	1	True
FliA	gene	flgM	repressor	2	2	0	0	1	True
YfeR	gene	yfeH	repressor	1	1	0	0	1	True
MntR	gene	cdtB	repressor	2	2	0	0	1	True
H	gene	hilA	repressor	1	0	1	0	1	True
FabR	gene	fabB	repressor	2	2	0	0	1	True
StpA	gene	pagC	repressor	1	0	1	0	1	True
FNR	TU	frdABCD	activator	1	0	1	0	1	True
Mlc	gene	hilE	repressor	3	3	0	0	1	True
SdiA	gene	srgC	regulator	2	0	2	0	1	True
ChbR	gene	chiP	repressor	4	4	0	0	1	True
SlyA	gene	STM1056	activator	1	0	1	0	1	True
CRP	gene	ompA	activator	1	1	0	0	1	True
EmrR	gene	emrA	repressor	1	1	0	0	1	True
QseB	gene	invF	repressor	1	1	0	0	1	True
CsrA	gene	proP	repressor	2	2	0	0	1	True
LysR	gene	envZ	regulator	1	1	0	0	1	True
InvF	gene	sicA	regulator	2	2	0	0	1	True
IHF	gene	hilA	regulator	6	6	0	0	1	True
StpA	gene	katE	repressor	1	1	0	0	1	True
BaeR	gene	mdtA	activator	1	1	0	0	1	True
SsrB	gene	msgA	regulator	1	0	1	0	1	True
HNS	gene	tcfA	regulator	1	1	0	0	1	True
RpoS	gene	ygaU	regulator	1	1	0	0	1	True
DksA	TU	ssrAB	activator	3	3	0	0	1	True
LeuO	gene	sdiA	activator	5	5	0	0	1	True
CspE	gene	cspA	repressor	2	2	0	0	1	True
NorR	gene	hmp	regulator	1	1	0	0	1	True
BaeR	gene	STM3031	regulator	54	54	0	0	1	True
IlvY	gene	sdiA	activator	1	1	0	0	1	True
SsrB	gene	sseA	activator	7	6	1	0	1	True
SoxS	TU	flhDC	activator	4	2	2	0	1	True
HilE	gene	hilE	activator	2	1	1	0	1	True
CsgD	gene	STM3388	regulator	2	2	0	0	1	True
EcnR	TU	flhDC	repressor	2	2	0	0	1	True
H	gene	ssrA	repressor	1	0	1	0	1	True
SsrB	gene	srfJ	activator	2	2	0	0	1	True
HNS	gene	pagC	regulator	8	8	0	0	1	True
InvF	gene	luxS	activator	1	0	1	0	1	True
Fis	gene	topA	regulator	5	5	0	0	1	True
OxyR	gene	oxyR	regulator	3	3	0	0	1	True
RpoS	gene	otsA	activator	1	0	1	0	1	True
Lrp	gene	traJ	activator	5	5	0	0	1	True
CsgD	TU	csgDEFG	regulator	8	8	0	0	1	True
HilA	gene	sopE	activator	1	1	0	0	1	True
InvF	gene	tnpA	activator	2	2	0	0	1	True
Sigma28	gene	lacZ	repressor	1	1	0	0	1	True
CadC	TU	araBAD	regulator	4	4	0	0	1	True
AraC	gene	hilA	activator	3	3	0	0	1	True
RcsB	gene	osmB	regulator	1	1	0	0	1	True
CpxR	gene	tatA	regulator	4	4	0	0	1	True
RpoS	gene	clpP	activator	3	2	1	0	1	True
RpoS	gene	pstS	regulator	2	2	0	0	1	True
IHF	TU	ilvBN	activator	1	1	0	0	1	True
FliZ	gene	hilD	regulator	2	2	0	0	1	True
RpoS	gene	slyA	regulator	2	2	0	0	1	True
OmpR	gene	ssaH	regulator	5	5	0	0	1	True
IHF	gene	prpBCDE	regulator	4	4	0	0	1	True
HilA	gene	hilA	activator	13	9	4	0	1	True
SlyA	gene	ssrB	activator	3	3	0	0	1	True
PhoP	gene	tppB	activator	4	0	4	0	1	True
PhoP	gene	mig-14	activator	7	2	5	0	1	True
Fis	gene	rpoS	activator	4	4	0	0	1	True
LeuO	gene	cas1	regulator	1	1	0	0	1	True
SirA	gene	sirA	activator	1	0	1	0	1	True
Rho	gene	map	activator	1	0	1	0	1	True
EmrR	gene	emrR	activator	1	0	1	0	1	True
SlyA	gene	ssrB	regulator	2	2	0	0	1	True
HilC	gene	invF	activator	48	38	10	0	1	True
SlyA	gene	sopD	regulator	5	5	0	0	1	True
CpxR	gene	hilD	regulator	2	2	0	0	1	True
OmpR	gene	hilA	regulator	1	1	0	0	1	True
CadC	gene	ompR	regulator	2	2	0	0	1	True
RstA	gene	modA	activator	1	0	1	0	1	True
TviA	gene	tviA	activator	6	5	0	1	1	True
HilA	gene	STM4257	activator	1	1	0	0	1	True
CueR	gene	cueO	regulator	5	2	3	0	1	True
NtrC	gene	rtcA	activator	3	3	0	0	1	True
Fur	gene	rstA	repressor	1	0	1	0	1	True
PhoP	gene	rstA	regulator	3	1	2	0	1	True
RcsB	gene	fur	regulator	1	1	0	0	1	True
RpoS	gene	rpoS	repressor	20	20	0	0	1	True
PhoP	gene	hilA	repressor	56	54	2	0	1	True
sigma-28	gene	sapA	regulator	2	2	0	0	1	True
CspE	gene	cspE	regulator	3	3	0	0	1	True
CsrA	gene	fucR	activator	1	1	0	0	1	True
StpA	gene	pagP	activator	1	0	1	0	1	True
HilA	gene	spaO	regulator	1	0	1	0	1	True
SoxS	gene	sodA	activator	31	31	0	0	1	True
InvF	gene	sopB	regulator	10	9	1	0	1	True
Sigma32	gene	degP	activator	1	1	0	0	1	True
PhoP	gene	hilD	regulator	5	5	0	0	1	True
MarA	gene	marA	repressor	1	1	0	0	1	True
OxyR	gene	katN	activator	4	4	0	0	1	True
PhoP	gene	hha	activator	1	0	1	0	1	True
LsrR	gene	fliC	repressor	1	1	0	0	1	True
FliA	gene	STM4242	activator	1	0	1	0	1	True
CysB	gene	cysJ	regulator	1	0	1	0	1	True
SlyA	gene	phoP	activator	4	3	1	0	1	True
DksA	gene	relA	activator	1	1	0	0	1	True
RpoS	gene	osmY	activator	8	1	7	0	1	True
PhoP	gene	lpxO	activator	3	0	3	0	1	True
Lrp	gene	lrp	repressor	10	10	0	0	1	True
HNS	gene	hilC	activator	1	1	0	0	1	True
CsrA	gene	himD	repressor	1	1	0	0	1	True
Fur	gene	hilA	activator	3	2	1	0	1	True
InvF	gene	sptP	activator	4	3	1	0	1	True
SlyA	gene	rcsB	regulator	4	4	0	0	1	True
HilA	gene	sigD	activator	1	1	0	0	1	True
TyrR	gene	tyrP	activator	1	1	0	0	1	True
SlyA	gene	STM2595	activator	1	0	1	0	1	True
RpoS	gene	yciF	activator	3	0	3	0	1	True
LeuO	gene	cse2	regulator	5	5	0	0	1	True
OxyR	gene	hemA	activator	3	3	0	0	1	True
LysR	gene	uhpT	regulator	4	4	0	0	1	True
LeuO	gene	dsbI	activator	2	0	2	0	1	True
SirA	gene	hilA	regulator	25	25	0	0	1	True
CsrA	gene	hilE	regulator	8	8	0	0	1	True
SlyA	gene	ydhJ	repressor	1	1	0	0	1	True
InvF	gene	sicA	activator	9	5	4	0	1	True
RcsA	gene	yrfF	repressor	1	1	0	0	1	True
Fur	gene	fes	regulator	1	0	1	0	1	True
YfeR	gene	yfeH	regulator	2	2	0	0	1	True
FliA	TU	flhDC	regulator	1	1	0	0	1	True
HilD	gene	sipB	regulator	1	0	1	0	1	True
PmrA	gene	pmrD	regulator	3	3	0	0	1	True
DksA	TU	ssrAB	regulator	1	1	0	0	1	True
RpoS	gene	yghA	repressor	2	2	0	0	1	True
GatR	gene	gatY	regulator	1	1	0	0	1	True
HNS	gene	katN	regulator	1	1	0	0	1	True
CysB	gene	cysE	activator	3	3	0	0	1	True
BaeR	gene	mdtABC	regulator	1	1	0	0	1	True
FliA	gene	flgB	regulator	2	2	0	0	1	True
StpA	gene	ugtL	regulator	1	1	0	0	1	True
RpoS	gene	sdhA	activator	1	0	1	0	1	True
CRP	TU	ilvBN	activator	2	2	0	0	1	True
CRP	gene	cspE	regulator	1	1	0	0	1	True
Fis	gene	tufB	regulator	4	4	0	0	1	True
RpoS	gene	acnA	regulator	1	0	1	0	1	True
HilD	gene	orgA	activator	3	3	0	0	1	True
Fur	gene	hilA	regulator	3	0	3	0	1	True
RpoS	gene	iraP	activator	3	3	0	0	1	True
LeuO	gene	cas1	activator	1	1	0	0	1	True
PhoP	gene	STM1330	regulator	1	1	0	0	1	True
Fis	gene	STM2903	repressor	1	0	1	0	1	True
PmrA	gene	STM1257	activator	1	1	0	0	1	True
Sigma28	gene	flgI	repressor	3	3	0	0	1	True
HilD	gene	invF	activator	39	38	1	0	1	True
Sigma28	gene	flgK	activator	2	0	2	0	1	True
CadC	gene	lysP	activator	1	1	0	0	1	True
Fis	gene	invF	regulator	1	1	0	0	1	True
HNS	gene	stpA	repressor	1	1	0	0	1	True
HilC	gene	invH	activator	1	0	1	0	1	True
MarA	TU	flhDC	regulator	5	5	0	0	1	True
CRP	gene	acs	regulator	1	1	0	0	1	True
OmpR	gene	ompS2	activator	15	14	1	0	1	True
StpA	gene	rpoS	regulator	1	1	0	0	1	True
YfhA	gene	rcsB	regulator	5	5	0	0	1	True
SoxS	gene	soxS	activator	2	1	1	0	1	True
CpxR	gene	sseB	repressor	1	1	0	0	1	True
NsrR	gene	ycfR	regulator	1	0	1	0	1	True
NsrR	TU	yeaR-yoaG	regulator	1	0	1	0	1	True
PhoP	gene	sipB	repressor	1	0	1	0	1	True
YgaE	gene	ompC	repressor	6	6	0	0	1	True
Fur	gene	fur	activator	2	0	2	0	1	True
OmpR	gene	ompS2	regulator	4	4	0	0	1	True
PhoP	gene	purB	activator	1	0	1	0	1	True
FNR	gene	metE	regulator	1	1	0	0	1	True
PhoP	gene	ssaH	activator	1	0	1	0	1	True
Lrp	gene	spvABCD	regulator	1	1	0	0	1	True
PhoP	gene	virK	regulator	6	2	4	0	1	True
DksA	gene	ssrB	regulator	3	3	0	0	1	True
CytR	gene	tsx	repressor	2	2	0	0	1	True
SoxS	gene	ssrB	activator	1	1	0	0	1	True
OxyR	gene	fur	regulator	5	5	0	0	1	True
FlhDC	gene	fliA	regulator	1	1	0	0	1	True
MntR	TU	sitABCD	regulator	18	18	0	0	1	True
CpxR	gene	cpxR	repressor	2	2	0	0	1	True
CpxR	gene	ppiA	activator	1	1	0	0	1	True
YfhA	gene	sciS	regulator	5	5	0	0	1	True
RcsB	gene	flgA	regulator	1	1	0	0	1	True
FabR	gene	ompA	regulator	1	1	0	0	1	True
CRP	gene	pgtP	activator	2	2	0	0	1	True
FlhD	gene	flhC	activator	1	1	0	0	1	True
SoxR	gene	soxS	activator	14	14	0	0	1	True
MarA	gene	marA	activator	4	4	0	0	1	True
SlyA	gene	siiB	regulator	1	1	0	0	1	True
NsrR	gene	hmpA	regulator	4	3	1	0	1	True
PhoP	gene	prgK	repressor	1	0	1	0	1	True
TviA	gene	tviB	regulator	1	1	0	0	1	True
FlhD	gene	STM1344	regulator	1	1	0	0	1	True
FliZ	gene	bamB	repressor	3	3	0	0	1	True
HNS	gene	sifA	activator	1	1	0	0	1	True
PhoP	gene	mgtBC	activator	3	1	2	0	1	True
SlyA	gene	STM2603	activator	1	0	1	0	1	True
PmrA	gene	ssrB	repressor	23	23	0	0	1	True
SsrB	gene	sseL	regulator	1	1	0	0	1	True
HNS	gene	STM3595	activator	5	5	0	0	1	True
LeuO	gene	hns	activator	1	1	0	0	1	True
CsrA	TU	flhDC	regulator	9	9	0	0	1	True
PhoP	gene	rstA	repressor	2	2	0	0	1	True
CRP	gene	yshA	regulator	5	5	0	0	1	True
HNS	gene	lon	repressor	2	2	0	0	1	True
SlyA	gene	hlyE	regulator	2	2	0	0	1	True
HilD	gene	slyA	regulator	2	2	0	0	1	True
YfeR	gene	yfeR	regulator	2	1	1	0	1	True
RpoS	gene	hup	repressor	1	1	0	0	1	True
PhoP	gene	hilD	repressor	21	21	0	0	1	True
Sigma28	gene	fliD	activator	2	0	2	0	1	True
HilA	gene	hilC	regulator	1	1	0	0	1	True
CRP	gene	yshA	activator	2	1	1	0	1	True
CRP	gene	hcp	regulator	2	2	0	0	1	True
CsrA	gene	ompC	activator	1	1	0	0	1	True
IscR	gene	invF	regulator	1	1	0	0	1	True
PmrA	gene	STM3635	regulator	7	7	0	0	1	True
AraC	gene	lacZ	activator	1	0	1	0	1	True
Sigma28	gene	flgL	activator	2	0	2	0	1	True
RamA	TU	flhDC	activator	1	0	1	0	1	True
FliA	gene	eptA	activator	1	0	1	0	1	True
HilD	gene	sigD	regulator	1	1	0	0	1	True
RpoS	gene	cspD	activator	1	0	1	0	1	True
BglJ	gene	leuO	activator	1	1	0	0	1	True
Fis	gene	gyrA	regulator	7	7	0	0	1	True
PhoP	gene	ugd	activator	20	12	8	0	1	True
HilD	gene	sipC	repressor	1	1	0	0	1	True
SoxS	TU	ssrAB	regulator	1	1	0	0	1	True
HNS	gene	ompS1	regulator	21	21	0	0	1	True
MetR	gene	metA	activator	1	1	0	0	1	True
ClpX	gene	fliC	regulator	1	1	0	0	1	True
RcsB	gene	invF	regulator	3	2	1	0	1	True
RcsB	gene	STM1485	regulator	7	7	0	0	1	True
RstA	gene	narZ	regulator	1	1	0	0	1	True
CsrA	gene	cysB	repressor	1	1	0	0	1	True
IHF	gene	spvR	repressor	1	1	0	0	1	True
PhoP	gene	amgR	regulator	9	9	0	0	1	True
PhoP	gene	pmrB	activator	1	1	0	0	1	True
RpoS	gene	csgD	activator	17	15	2	0	1	True
CysB	gene	cysP	regulator	4	3	1	0	1	True
RcsB	gene	osmC	activator	1	1	0	0	1	True
CreB	gene	talA	regulator	1	1	0	0	1	True
PmrA	gene	phoP	activator	1	0	1	0	1	True
HNS	gene	cse1	repressor	1	1	0	0	1	True
DksA	gene	hmp	activator	1	1	0	0	1	True
Fis	gene	dps	repressor	1	1	0	0	1	True
SoxS	TU	flhDC	repressor	7	7	0	0	1	True
HilD	gene	dsbA	activator	2	2	0	0	1	True
SlyA	gene	rpoS	regulator	2	1	1	0	1	True
Sigma28	gene	flgH	repressor	3	3	0	0	1	True
CRP	gene	hlyE	repressor	12	12	0	0	1	True
PhoP	TU	phoPQ	activator	10	4	6	0	1	True
HilE	gene	hilA	repressor	37	37	0	0	1	True
HNS	gene	tcfA	repressor	1	1	0	0	1	True
HNS	gene	sbmC	regulator	2	2	0	0	1	True
RpoS	gene	arcA	activator	1	0	1	0	1	True
PhoP	gene	mig-14	repressor	1	1	0	0	1	True
FlhDC	gene	ycgR	regulator	1	0	1	0	1	True
RtsB	gene	galF	regulator	1	1	0	0	1	True
SdiA	TU	PSLT024	regulator	1	0	1	0	1	True
FNR	gene	feoB	regulator	2	2	0	0	1	True
SdiA	gene	srgE	regulator	15	6	9	0	1	True
LeuO	gene	cas5	regulator	1	1	0	0	1	True
MarA	gene	ramA	regulator	4	4	0	0	1	True
FimW	gene	fimA	activator	2	2	0	0	1	True
LexA	gene	lexA	repressor	3	1	1	1	1	True
SlyA	gene	pagC	repressor	4	4	0	0	1	True
NarL	gene	narL	regulator	1	1	0	0	1	True
SsrB	gene	srfJ	regulator	6	6	0	0	1	True
LeuO	gene	ompS1	activator	22	20	2	0	1	True
RamA	gene	soxS	activator	2	2	0	0	1	True
SlyA	gene	STM1330	regulator	1	1	0	0	1	True
PhoP	gene	amgR	activator	4	4	0	0	1	True
YdcI	gene	ydcI	repressor	1	1	0	0	1	True
AcrR	gene	acrB	regulator	4	4	0	0	1	True
OmpR	gene	cadB	regulator	4	4	0	0	1	True
LexA	gene	lexA	regulator	6	2	4	0	1	True
NtrC	gene	glnA	regulator	2	2	0	0	1	True
InvF	gene	sipB	activator	5	4	1	0	1	True
PhoP	gene	ssrA	regulator	5	5	0	0	1	True
PocR	gene	pocR	activator	5	5	0	0	1	True
CsgD	gene	STM1344	activator	3	3	0	0	1	True
PhoP	gene	pagO	activator	1	0	1	0	1	True
HNS	gene	ssrA	repressor	1	1	0	0	1	True
CRP	gene	stpA	activator	1	0	1	0	1	True
LexA	gene	yafD	activator	1	0	1	0	1	True
TyrR	gene	mtr	activator	1	1	0	0	1	True
MltE	gene	csgD	regulator	1	1	0	0	1	True
StpA	gene	hns	activator	10	8	2	0	1	True
PhoP	TU	phoPQ	regulator	2	1	1	0	1	True
RcsB	gene	sirA	activator	3	2	1	0	1	True
RhaS	gene	rhaT	activator	1	1	0	0	1	True
HNS	gene	hilD	regulator	3	3	0	0	1	True
HilD	gene	sipB	repressor	1	1	0	0	1	True
PhoP	gene	slyB	repressor	2	2	0	0	1	True
RpoS	gene	rpoE	activator	3	2	1	0	1	True
RcsB	gene	csrB	activator	3	2	1	0	1	True
Fur	gene	entB	regulator	4	0	4	0	1	True
RtsA	gene	hilC	regulator	4	4	0	0	1	True
HU	gene	rpoS	regulator	1	1	0	0	1	True
PhoP	gene	pmrC	regulator	2	1	1	0	1	True
RtsA	gene	lon	activator	6	6	0	0	1	True
Sigma28	gene	flgM	repressor	1	1	0	0	1	True
SsrB	gene	mcpC	repressor	3	3	0	0	1	True
EutR	gene	eutR	activator	1	0	1	0	1	True
AraC	gene	ygeA	activator	1	1	0	0	1	True
InvF	gene	sipC	activator	10	8	2	0	1	True
NtrC	gene	argT	regulator	2	2	0	0	1	True
FabR	gene	fabA	repressor	2	2	0	0	1	True
PhoP	gene	pipD	activator	2	0	2	0	1	True
PhoB	gene	fimZ	activator	1	1	0	0	1	True
H	gene	proV	repressor	1	0	1	0	1	True
AraC	gene	hilA	repressor	2	2	0	0	1	True
Fis	gene	hns	regulator	1	1	0	0	1	True
HNS	TU	acrEF	repressor	4	4	0	0	1	True
CsrA	gene	sopD2	repressor	3	3	0	0	1	True
FliA	gene	flgM	regulator	3	0	3	0	1	True
AraC	gene	ygeA	regulator	3	1	2	0	1	True
RpoS	gene	spvA	activator	3	3	0	0	1	True
PhoP	gene	tag	activator	1	0	1	0	1	True
SirA	gene	hilA	activator	22	22	0	0	1	True
SsrB	gene	hilD	regulator	5	5	0	0	1	True
CpxR	gene	yoaE	regulator	10	10	0	0	1	True
FimZ	TU	flhDC	activator	2	2	0	0	1	True
LexA	gene	cho	regulator	1	0	1	0	1	True
Fis	gene	topA	activator	8	8	0	0	1	True
Hha	gene	hilA	activator	3	3	0	0	1	True
RpoS	gene	dsrA	activator	3	1	2	0	1	True
CsrA	gene	fur	regulator	3	3	0	0	1	True
McbR	gene	yciGFE	activator	1	1	0	0	1	True
Fur	gene	feoB	activator	1	1	0	0	1	True
sigma-28	TU	flhDC	regulator	1	1	0	0	1	True
PhoP	gene	hlyE	activator	4	1	3	0	1	True
RcsB	gene	dps	activator	15	5	10	0	1	True
HilD	gene	gtgE	activator	5	5	0	0	1	True
LysR	gene	oxyR	regulator	1	1	0	0	1	True
SlyA	gene	STM2585A	activator	1	0	1	0	1	True
STM4417	gene	iolE	regulator	6	6	0	0	1	True
RpoS	gene	lacZ	regulator	3	3	0	0	1	True
HNS	gene	tpx	regulator	1	1	0	0	1	True
InvF	gene	STM4257	activator	1	1	0	0	1	True
LexA	gene	recA	repressor	1	1	0	0	1	True
PhoP	gene	era	regulator	1	0	1	0	1	True
HilA	gene	sirA	activator	1	1	0	0	1	True
HilD	gene	lpxR	regulator	31	31	0	0	1	True
StpA	gene	crp	activator	2	0	2	0	1	True
SlyA	gene	hlyE	activator	11	11	0	0	1	True
PmrA	gene	aroQ	activator	1	0	1	0	1	True
PmrA	gene	pbgP	regulator	3	0	3	0	1	True
YqhC	gene	yqhD	regulator	1	1	0	0	1	True
IlvY	gene	ilvC	regulator	15	15	0	0	1	True
CsrA	gene	csrB	activator	2	2	0	0	1	True
RpoS	gene	sscB	activator	1	1	0	0	1	True
NadR	gene	nadA	repressor	1	1	0	0	1	True
SirA	gene	srgB	regulator	1	1	0	0	1	True
NsrR	gene	tehA	regulator	1	0	1	0	1	True
Sigma28	gene	flk	repressor	1	1	0	0	1	True
OmpR	gene	envZ	regulator	1	1	0	0	1	True
HNS	gene	rpsB	regulator	1	1	0	0	1	True
HilC	gene	ssaJ	regulator	1	1	0	0	1	True
TyrR	gene	aniC	activator	4	4	0	0	1	True
Crl	gene	csgD	repressor	1	1	0	0	1	True
NorR	gene	norV	regulator	1	0	1	0	1	True
StpA	gene	STM3138	activator	1	0	1	0	1	True
RcsB	TU	flhDC	repressor	31	31	0	0	1	True
InvF	gene	prgH	regulator	2	2	0	0	1	True
AraC	gene	araA	regulator	2	0	2	0	1	True
PhoP	gene	pagC	regulator	21	12	9	0	1	True
HilD	gene	hilD	activator	30	25	0	5	1	True
SlyA	gene	ugtL	regulator	38	34	4	0	1	True
SlyA	gene	narJ	activator	1	1	0	0	1	True
HilE	gene	hilD	regulator	2	2	0	0	1	True
Crl	gene	rpoS	activator	1	1	0	0	1	True
IgaA	gene	rcsB	regulator	1	1	0	0	1	True
YncC	gene	yciGFE	activator	1	1	0	0	1	True
OmpR	gene	fljB	repressor	2	2	0	0	1	True
FliZ	gene	ssrB	regulator	1	1	0	0	1	True
RpoS	gene	katE	regulator	10	10	0	0	1	True
YdiV	gene	STM3611	activator	1	1	0	0	1	True
HilA	gene	sopA	regulator	1	1	0	0	1	True
Crl	gene	rpoS	regulator	1	1	0	0	1	True
OmpR	TU	flhDC	repressor	2	2	0	0	1	True
HilD	gene	sprB	regulator	4	4	0	0	1	True
PhoP	gene	yqjA	regulator	9	7	2	0	1	True
RcsB	gene	osmB	activator	1	1	0	0	1	True
HNS	gene	hlyE	repressor	6	6	0	0	1	True
HilD	gene	hilC	regulator	10	10	0	0	1	True
HilD	gene	invH	activator	1	0	1	0	1	True
CsrA	TU	flhDC	activator	16	16	0	0	1	True
CpxR	gene	tsgA	activator	1	1	0	0	1	True
HilC	gene	hilD	repressor	1	1	0	0	1	True
HilE	gene	hilA	activator	9	8	1	0	1	True
EmrR	gene	pagC	activator	2	0	2	0	1	True
Lrp	gene	traJ	repressor	1	1	0	0	1	True
CsgD	gene	yjcC	regulator	16	16	0	0	1	True
FNR	gene	pepT	regulator	2	1	1	0	1	True
STM3124	gene	STM3122	regulator	1	1	0	0	1	True
HilD	gene	slrP	activator	8	8	0	0	1	True
PhoP	gene	mgrB	activator	5	3	2	0	1	True
OxyR	gene	ssaN	regulator	1	1	0	0	1	True
HilC	gene	invF	regulator	12	12	0	0	1	True
RtsA	gene	hilA	repressor	9	9	0	0	1	True
CysB	gene	cysJIH	regulator	27	27	0	0	1	True
SsrB	gene	hns	activator	3	3	0	0	1	True
CsrA	gene	hilE	repressor	5	5	0	0	1	True
SlyA	gene	narG	activator	1	1	0	0	1	True
PhoP	gene	invA	repressor	1	0	1	0	1	True
SoxS	gene	tolC	regulator	1	1	0	0	1	True
HNS	gene	hemX	regulator	4	4	0	0	1	True
CRP	gene	pepT	regulator	1	1	0	0	1	True
DksA	gene	ssrA	regulator	1	1	0	0	1	True
PhoP	gene	yobG	regulator	1	0	1	0	1	True
SirA	gene	crp	regulator	1	1	0	0	1	True
CsgD	gene	bscA	regulator	1	1	0	0	1	True
CspA	gene	hns	activator	1	1	0	0	1	True
FNR	gene	acnA	regulator	1	1	0	0	1	True
Fur	gene	fhuA	repressor	1	0	1	0	1	True
SsrB	gene	srfN	repressor	1	1	0	0	1	True
LeuO	gene	leuO	activator	10	8	2	0	1	True
CRP	gene	ompF	activator	2	2	0	0	1	True
AraC	gene	araJ	regulator	1	0	1	0	1	True
DksA	gene	icdA	activator	1	0	1	0	1	True
CpxR	gene	scsC	activator	1	0	1	0	1	True
LexA	gene	tum	activator	1	0	1	0	1	True
HNS	gene	yciG	regulator	1	1	0	0	1	True
RstA	gene	csgD	regulator	1	1	0	0	1	True
SsrB	gene	ssrB	repressor	2	2	0	0	1	True
CpxR	gene	yjfP	activator	1	1	0	0	1	True
SsrB	gene	ydgT	regulator	2	2	0	0	1	True
UvrY	gene	csrA	regulator	1	1	0	0	1	True
InvF	gene	sipC	regulator	1	0	1	0	1	True
HilA	gene	hilC	activator	1	1	0	0	1	True
Fur	gene	ryhB	regulator	1	0	1	0	1	True
SoxS	gene	mntH	activator	1	1	0	0	1	True
RpoS	gene	spvR	repressor	4	4	0	0	1	True
NsrR	gene	STM1808	regulator	3	1	2	0	1	True
FlhDC	gene	fliE	activator	1	1	0	0	1	True
HilA	gene	barA	regulator	1	1	0	0	1	True
CsrA	gene	artI	regulator	1	1	0	0	1	True
Fur	gene	feoB	repressor	4	3	1	0	1	True
SprB	gene	sptP	regulator	1	1	0	0	1	True
FlhDC	gene	repA	regulator	1	1	0	0	1	True
PhoP	gene	rpoD	activator	1	0	1	0	1	True
HilA	gene	spaS	activator	2	0	2	0	1	True
HNS	gene	pagC	repressor	2	2	0	0	1	True
Sigma28	TU	fliDST	activator	1	0	1	0	1	True
CRP	gene	crp	regulator	5	4	1	0	1	True
HNS	gene	ssrB	regulator	1	1	0	0	1	True
FimZ	gene	ssrB	activator	1	0	1	0	1	True
HNS	TU	ssrAB	repressor	52	52	0	0	1	True
Fur	gene	sitA	regulator	1	0	1	0	1	True
DksA	gene	rpoS	regulator	9	9	0	0	1	True
DksA	gene	mdh	regulator	1	1	0	0	1	True
CadC	gene	STM4538	regulator	1	1	0	0	1	True
YdcR	gene	srfN	activator	4	3	1	0	1	True
RamA	gene	hmp	regulator	3	3	0	0	1	True
sigma-70	gene	yihU	activator	1	0	1	0	1	True
HilD	TU	flhDC	regulator	9	9	0	0	1	True
FlhDC	gene	ydiV	activator	1	1	0	0	1	True
RcsB	gene	rcsB	regulator	3	0	3	0	1	True
CueR	gene	lacZ	regulator	1	0	1	0	1	True
CsrA	gene	slyA	regulator	2	2	0	0	1	True
PhoP	gene	crp	activator	2	0	2	0	1	True
CsrA	gene	cstA	regulator	1	1	0	0	1	True
HilC	gene	sipA	activator	1	1	0	0	1	True
Fis	gene	fis	repressor	1	1	0	0	1	True
Fur	gene	fhuF	regulator	3	0	3	0	1	True
CRP	gene	crp	activator	2	1	1	0	1	True
PhoP	gene	pmrD	activator	15	1	14	0	1	True
RcsB	gene	STM1485	activator	11	10	1	0	1	True
SlyA	gene	pmrC	regulator	2	2	0	0	1	True
NtrC	gene	glnK	regulator	1	0	1	0	1	True
Cra	gene	fbp	activator	1	1	0	0	1	True
RtsA	gene	hilC	activator	16	16	0	0	1	True
SlyA	gene	steB	regulator	1	1	0	0	1	True
OmpR	gene	mgtC	regulator	4	2	2	0	1	True
PmrA	gene	pmrB	activator	5	0	5	0	1	True
PhoP	gene	pmrA	activator	7	2	5	0	1	True
PhoP	gene	hlyE	regulator	2	2	0	0	1	True
SsrB	gene	ompF	regulator	2	2	0	0	1	True
SsrB	gene	ssaR	regulator	1	1	0	0	1	True
SsrB	gene	ssrB	activator	14	11	3	0	1	True
TdcR	gene	tdcA	activator	2	2	0	0	1	True
HNS	gene	ssrA	regulator	4	4	0	0	1	True
PocR	gene	pduF	repressor	1	1	0	0	1	True
CadC	gene	ompC	activator	1	1	0	0	1	True
ZntR	gene	zntA	regulator	1	1	0	0	1	True
Hha	gene	ssrA	regulator	1	1	0	0	1	True
Fis	gene	dnaA	regulator	1	1	0	0	1	True
OmpR	gene	cadB	repressor	4	4	0	0	1	True
CysB	gene	cysJIH	repressor	2	2	0	0	1	True
MarA	gene	tolC	activator	5	5	0	0	1	True
RamA	gene	tolC	regulator	4	4	0	0	1	True
FlhD	gene	flhD	activator	1	1	0	0	1	True
PhoP	gene	fadD	regulator	1	0	1	0	1	True
MarA	gene	acrR	repressor	2	2	0	0	1	True
HNS	gene	cadC	repressor	1	1	0	0	1	True
InvF	gene	spaS	activator	2	0	2	0	1	True
FlhC	gene	fliA	activator	2	2	0	0	1	True
MntR	gene	mntH	regulator	3	2	1	0	1	True
LexA	gene	def	regulator	3	0	3	0	1	True
InvF	gene	sipBCDA	activator	2	2	0	0	1	True
PhoP	gene	tdcA	repressor	1	1	0	0	1	True
CadC	gene	cadC	regulator	1	1	0	0	1	True
StpA	gene	hns	regulator	1	1	0	0	1	True
PutA	gene	putA	repressor	1	0	0	1	1	True
OmpR	gene	lacZ	activator	2	0	2	0	1	True
Sigma28	gene	fliA	regulator	4	4	0	0	1	True
Fur	gene	lacZ	regulator	2	0	2	0	1	True
StpA	gene	stpA	regulator	2	2	0	0	1	True
RcsB	gene	ams	activator	1	0	1	0	1	True
LeuO	gene	sdiA	regulator	9	9	0	0	1	True
OxyR	gene	dps	regulator	1	1	0	0	1	True
PhoB	gene	dnaK	activator	1	0	1	0	1	True
PhoP	gene	pmrAB	activator	7	6	1	0	1	True
YafQ	gene	rho	regulator	1	1	0	0	1	True
FNR	gene	pepT	activator	1	0	1	0	1	True
IHF	gene	dps	regulator	1	1	0	0	1	True
YncC	gene	yciG	activator	2	2	0	0	1	True
H	gene	fil	regulator	1	0	1	0	1	True
CsrA	gene	csrB	repressor	8	8	0	0	1	True
PhoP	gene	invH	repressor	1	0	1	0	1	True
YgaE	gene	ompC	regulator	3	3	0	0	1	True
StpA	gene	mgtA	regulator	4	4	0	0	1	True
CpxR	gene	sseB	regulator	1	1	0	0	1	True
HilD	gene	invF	repressor	1	1	0	0	1	True
RpoS	gene	narU	regulator	1	0	1	0	1	True
Hha	gene	hilD	regulator	1	1	0	0	1	True
MviA	gene	rpoS	activator	4	4	0	0	1	True
Rho	gene	chiP	activator	10	0	10	0	1	True
OmpR	gene	tviA	regulator	10	10	0	0	1	True
PmrA	gene	pmrA	activator	9	0	9	0	1	True
OmpR	gene	cadC	repressor	4	4	0	0	1	True
HilD	gene	hilE	repressor	2	2	0	0	1	True
HNS	TU	ssrAB	activator	4	4	0	0	1	True
PhoP	gene	phoP	repressor	10	8	2	0	1	True
HilD	gene	lon	repressor	2	2	0	0	1	True
FadD	gene	hilA	regulator	1	1	0	0	1	True
HilD	gene	fliZ	activator	1	1	0	0	1	True
MarR	TU	acrAB	regulator	1	1	0	0	1	True
DksA	gene	sipC	activator	7	6	1	0	1	True
IHF	gene	csgD	regulator	3	3	0	0	1	True
SoxR	TU	acrAB	activator	2	2	0	0	1	True
PhoP	gene	pbgP	regulator	1	1	0	0	1	True
YjjQ	TU	flhDC	repressor	1	1	0	0	1	True
DeoR	gene	tsx	activator	2	2	0	0	1	True
OmpR	gene	tppB	regulator	5	4	1	0	1	True
StpA	gene	stpA	activator	3	0	3	0	1	True
CpxR	gene	tsgA	regulator	1	1	0	0	1	True
HNS	gene	ompR	regulator	5	5	0	0	1	True
RpoS	gene	mlrA	activator	1	1	0	0	1	True
PhoP	gene	ugtL	regulator	75	57	18	0	1	True
RcsB	gene	iagA	repressor	1	1	0	0	1	True
CRP	gene	stpA	repressor	1	1	0	0	1	True
AraC	gene	sigD	activator	1	0	1	0	1	True
RcsB	gene	ftsZ	regulator	1	0	1	0	1	True
CsgD	gene	adrA	regulator	27	26	1	0	1	True
PhoP	gene	sifB	activator	1	0	1	0	1	True
RpoS	gene	fliZ	activator	2	0	2	0	1	True
HNS	gene	yciGFE	regulator	3	3	0	0	1	True
CRP	gene	spf	activator	2	2	0	0	1	True
CRP	gene	pgtP	regulator	1	1	0	0	1	True
KdgR	gene	araH	regulator	6	6	0	0	1	True
MlrA	gene	csgD	activator	7	7	0	0	1	True
PmrA	gene	rcsB	activator	1	0	1	0	1	True
HNS	gene	hdfR	repressor	2	2	0	0	1	True
CpxR	gene	acrD	regulator	2	2	0	0	1	True
PhoP	gene	pmrC	repressor	1	1	0	0	1	True
HNS	gene	hilA	regulator	26	26	0	0	1	True
LexA	gene	ftsK	regulator	1	0	1	0	1	True
FabR	gene	fabA	regulator	4	4	0	0	1	True
RpoS	gene	ydgP	activator	1	0	1	0	1	True
HNS	gene	hilA	activator	16	16	0	0	1	True
RcsB	gene	ugd	regulator	15	0	15	0	1	True
PtsJ	gene	pdxK	activator	2	2	0	0	1	True
FliZ	gene	fliB	activator	1	0	1	0	1	True
Fis	gene	hlyE	regulator	5	5	0	0	1	True
PhoP	gene	phoN	activator	7	0	7	0	1	True
CRP	gene	hlyE	regulator	21	21	0	0	1	True
RamA	TU	flhDC	repressor	2	2	0	0	1	True
RpoS	gene	mgtC	activator	1	1	0	0	1	True
PhoP	gene	pagN	regulator	1	0	1	0	1	True
Cra	gene	iscR	regulator	6	6	0	0	1	True
RamA	gene	ramA	regulator	11	11	0	0	1	True
FimZ	gene	hilA	repressor	2	2	0	0	1	True
Fur	gene	hfq	regulator	1	0	1	0	1	True
PhoP	TU	ssrAB	regulator	3	3	0	0	1	True
FliZ	gene	STM3604	activator	1	0	1	0	1	True
NadR	gene	pncB	repressor	2	2	0	0	1	True
CsgD	gene	lpfE	activator	2	2	0	0	1	True
HilD	TU	ssrAB	activator	16	16	0	0	1	True
SirA	gene	fimA	regulator	3	3	0	0	1	True
RamA	TU	flhDC	regulator	6	6	0	0	1	True
Sigma54	gene	ant	activator	1	0	1	0	1	True
PmrA	gene	STM1253	activator	5	3	2	0	1	True
OmpR	gene	csgD	regulator	3	3	0	0	1	True
PhoP	gene	phoP	activator	51	23	28	0	1	True
GatR	gene	gatZ	regulator	1	1	0	0	1	True
HNS	gene	hns	regulator	31	31	0	0	1	True
CspA	gene	cspB	activator	1	1	0	0	1	True
PmrA	gene	yrbL	repressor	2	2	0	0	1	True
MarA	gene	rob	repressor	7	7	0	0	1	True
LeuO	gene	tpx	activator	1	0	1	0	1	True
RamA	gene	hmp	activator	1	1	0	0	1	True
CsgD	gene	bcsZ	repressor	1	1	0	0	1	True
PhoP	gene	efp	activator	1	0	1	0	1	True
PhoP	gene	rpoS	activator	1	0	1	0	1	True
YncC	gene	katN	regulator	7	7	0	0	1	True
HNS	gene	ompC	regulator	2	2	0	0	1	True
OmpR	gene	ompF	activator	14	1	13	0	1	True
FliZ	TU	flhDC	repressor	5	5	0	0	1	True
FNR	gene	fnr	regulator	5	5	0	0	1	True
Rho	gene	tufB	activator	13	0	13	0	1	True
RpoS	gene	rprA	activator	1	0	1	0	1	True
SoxS	gene	micF	activator	4	4	0	0	1	True
PocR	gene	hilA	repressor	3	3	0	0	1	True
SdiA	TU	acrAB	regulator	1	1	0	0	1	True
CRP	gene	rpoS	repressor	5	5	0	0	1	True
HilD	gene	hilD	repressor	5	5	0	0	1	True
RcsB	gene	rprA	regulator	4	4	0	0	1	True
HNS	gene	hilD	repressor	4	4	0	0	1	True
SlyA	gene	rcsB	repressor	12	12	0	0	1	True
CRP	gene	rpoE	regulator	2	2	0	0	1	True
CpxR	gene	pmrC	regulator	8	8	0	0	1	True
Sigma28	gene	flgM	activator	6	0	6	0	1	True
RcsB	gene	rcsA	activator	4	4	0	0	1	True
LexA	gene	dinP	activator	13	13	0	0	1	True
NagC	TU	glmUS	regulator	2	2	0	0	1	True