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dictionaries/genes.txt
0 → 100644
1 | +PTX-2 | ||
2 | +Elk1 | ||
3 | +insulin-like growth factor-I | ||
4 | +protease-activated receptor-2 | ||
5 | +SPP1 | ||
6 | +LC3 | ||
7 | +Receptor for advanced glycation end products | ||
8 | +AT1 | ||
9 | +Enhancer of zeste homolog 2 | ||
10 | +ATG4B | ||
11 | +EZH2 | ||
12 | +p38 | ||
13 | +Lefty A | ||
14 | +TF | ||
15 | +MyD88 | ||
16 | +CD90 | ||
17 | +Endothelin-1 | ||
18 | +Wnt1-inducible signaling protein 1 | ||
19 | +bone morphogenetic protein | ||
20 | +tagln | ||
21 | +IQGAP1 | ||
22 | +PINK1 | ||
23 | +miR-140 | ||
24 | +Th1 | ||
25 | +IGFBP-1 | ||
26 | +syndecan-2 | ||
27 | +interleukin IL-13 | ||
28 | +IL-13 | ||
29 | +Nox-4 | ||
30 | +IGF-1 | ||
31 | +transforming growth factor beta 1 | ||
32 | +BMP3 | ||
33 | +TGF-alpha | ||
34 | +Periostin | ||
35 | +AKT | ||
36 | +activin | ||
37 | +GLP-1 | ||
38 | +IGF-2 | ||
39 | +transforming growth factor TGF-beta 1 | ||
40 | +HIF-1a | ||
41 | +ANGII | ||
42 | +ACE | ||
43 | +Janus kinase type 2 | ||
44 | +bmp1 | ||
45 | +RhoA | ||
46 | +HLF | ||
47 | +Muc5ac | ||
48 | +MK2 | ||
49 | +heme oxygenase-1 | ||
50 | +Bcl-2 | ||
51 | +let-7d | ||
52 | +VASH-2 | ||
53 | +HSP27 | ||
54 | +transforming growth factor beta | ||
55 | +transforming growth factor b-1 | ||
56 | +transforming growth factor-beta | ||
57 | +superoxide dismutase 3 | ||
58 | +Transforming growth factor TGF-beta1 | ||
59 | +MMP1 | ||
60 | +TNF-a | ||
61 | +ECSOD | ||
62 | +Sulf1 | ||
63 | +MT1 | ||
64 | +CCN1 | ||
65 | +Histone deacetylase 6 | ||
66 | +Thy-1 | ||
67 | +CD19 | ||
68 | +HAI-2 | ||
69 | +ALK5 | ||
70 | +mTORC2 | ||
71 | +Krebs Von Den Lungen-6 | ||
72 | +tumor necrosis factor-alpha | ||
73 | +PTEN | ||
74 | +hypoxia-inducible factor 1a | ||
75 | +BMPR2 | ||
76 | +PI3K | ||
77 | +transforming growth factor-beta1 | ||
78 | +Mknk2 | ||
79 | +mir-21 | ||
80 | +STIP1 | ||
81 | +TIMP-1 | ||
82 | +MT5-MMP | ||
83 | +Serpin B3/B4 | ||
84 | +HIF1a | ||
85 | +renin | ||
86 | +NEU1 | ||
87 | +MMP-1 | ||
88 | +Spiruchostatin A | ||
89 | +fibroblast growth factor receptor 2 | ||
90 | +SPARC | ||
91 | +Nox1 | ||
92 | +CC chemokine receptor 2 | ||
93 | +PEX13p | ||
94 | +C3a | ||
95 | +miR-31 | ||
96 | +folate receptor beta | ||
97 | +MAP3K19 | ||
98 | +transforming growth factor b | ||
99 | +c-Fos | ||
100 | +ET-B | ||
101 | +USP11 | ||
102 | +smad2/3 | ||
103 | +TNFa | ||
104 | +PAI-1 | ||
105 | +Wnt5A | ||
106 | +IGFBP-3 | ||
107 | +platelet-derived growth factor isoforms PDGF A and B | ||
108 | +smooth muscle a-actin | ||
109 | +VCAM-1 | ||
110 | +Jun NH2-terminal kinase | ||
111 | +miR-326 | ||
112 | +p21 | ||
113 | +MKL1 | ||
114 | +HDAC10 | ||
115 | +ITGB6 | ||
116 | +LPA1 | ||
117 | +histone deacetylase | ||
118 | +tgfbr1/2 | ||
119 | +Transforming growth factor beta1 | ||
120 | +YY1 | ||
121 | +Caveolin-1 | ||
122 | +TNC | ||
123 | +cyclosporine A | ||
124 | +TGFB | ||
125 | +S1P | ||
126 | +Vimentin | ||
127 | +Transforming growth factor beta | ||
128 | +DDR2 | ||
129 | +p21waf1 | ||
130 | +IL-1beta | ||
131 | +3-hydroxy-3-methylglutaryl CoenzymeA HMG CoA reductase | ||
132 | +N -cadherin | ||
133 | +NOX4 | ||
134 | +miR-134 | ||
135 | +serum amyloid P | ||
136 | +lymphotactin | ||
137 | +Transforming growth factor TGF-b1 | ||
138 | +TGFbeta | ||
139 | +Keap1 | ||
140 | +MT3 | ||
141 | +MMP-3 | ||
142 | +CUX1 | ||
143 | +Bax inhibitor-1 | ||
144 | +LEF/TCF | ||
145 | +matrix metalloproteinase-7 | ||
146 | +MCP-1 | ||
147 | +PPAR | ||
148 | +TbetaRII | ||
149 | +miR-30a | ||
150 | +bone morphogenetic protein 7 | ||
151 | +Mitogen-activated protein kinase-activated protein kinase-2 | ||
152 | +miR-17 92 | ||
153 | +TNFSF14 | ||
154 | +CD206 | ||
155 | +CTGF | ||
156 | +Galectin-3 | ||
157 | +ACTA2 | ||
158 | +Osteopontin | ||
159 | +transforming growth factor-beta 1 | ||
160 | +TGF-b1 | ||
161 | +SGPL1 | ||
162 | +Smad3 | ||
163 | +transient receptor potential vanilloid 4 | ||
164 | +NOS | ||
165 | +CXCL9 | ||
166 | +NADPH oxidase 4 | ||
167 | +High mobility group AT-hook 2 | ||
168 | +beta-catenin | ||
169 | +STC1 | ||
170 | +Membrane-type MT-MMPs | ||
171 | +follistatin | ||
172 | +IL8 | ||
173 | +miR-424 | ||
174 | +Pentraxin-2 | ||
175 | +miR-21 | ||
176 | +Toll-like receptor 4 | ||
177 | +interleukin IL-6 | ||
178 | +cytokeratin 19 | ||
179 | +ANG converting enzyme | ||
180 | +tissue factor | ||
181 | +TRPV4 | ||
182 | +FOXF1 | ||
183 | +C/EBP homologous protein | ||
184 | +Cysteine-rich protein 1 | ||
185 | +thrombin | ||
186 | +insulin-like growth factor I | ||
187 | +ALK-5 | ||
188 | +ZO-1 | ||
189 | +C3aR | ||
190 | +SNAI2 | ||
191 | +TIAM1 | ||
192 | +SMAD2/3 | ||
193 | +TGFb-1 | ||
194 | +a-smooth muscle actin | ||
195 | +latent membrane protein LMP 1 | ||
196 | +miR | ||
197 | +HSP47 | ||
198 | +mothers against decapentaplegic homolog 3 | ||
199 | +RANTES | ||
200 | +TNF-alpha | ||
201 | +YKL-40 | ||
202 | +Smad2/3 | ||
203 | +AKT2 | ||
204 | +Nox4 | ||
205 | +Angiotensin II | ||
206 | +transforming growth factor b expression | ||
207 | +CXCL10 | ||
208 | +BMP-5 | ||
209 | +IFN-gammaR | ||
210 | +miR-1343 | ||
211 | +plasminogen activator inhibitor 1 | ||
212 | +Rpn6 | ||
213 | +lysyl oxidase | ||
214 | +ltbp1/2 | ||
215 | +IL-6 | ||
216 | +CCN5 | ||
217 | +Extracellular Matrix Metalloproteinase Inducer | ||
218 | +NOX-2 | ||
219 | +Stat3 | ||
220 | +Yin Yang 1 | ||
221 | +phosphoinositide 3-kinase | ||
222 | +transforming growth factor b1 | ||
223 | +NOX-4 | ||
224 | +Transforming growth factor-b | ||
225 | +Aortic carboxypeptidase-like protein | ||
226 | +FIEL1 | ||
227 | +miR-154 | ||
228 | +Sema7a | ||
229 | +matrix metalloprotease-1 | ||
230 | +PEX13 | ||
231 | +COL1A1 | ||
232 | +TNFalpha | ||
233 | +Matriptase | ||
234 | +EGFR | ||
235 | +HGF | ||
236 | +Bax | ||
237 | +interleukin-6 | ||
238 | +CCL2 | ||
239 | +MMP-12 | ||
240 | +IKKa | ||
241 | +miR-26a | ||
242 | +SMAD2 | ||
243 | +matriptase | ||
244 | +semaphorin-7A | ||
245 | +Syndecan-2 | ||
246 | +ILK | ||
247 | +beta-galactosidase | ||
248 | +LRG | ||
249 | +Cthrc1 | ||
250 | +transforming growth factor beta1 | ||
251 | +MAPKAPK2 | ||
252 | +suppressor of cytokine signaling 1 | ||
253 | +Serpin B3 | ||
254 | +Pigment epithelium-derived factor | ||
255 | +JNK | ||
256 | +Transforming growth factor-beta | ||
257 | +CD25 | ||
258 | +PAR-2 | ||
259 | +Thymosin b4 | ||
260 | +Activin | ||
261 | +E -cadherin | ||
262 | +BCL-2 | ||
263 | +beta 1 integrin | ||
264 | +Toll-like receptor 9 | ||
265 | +BARD1 | ||
266 | +MIG | ||
267 | +Fas ligand | ||
268 | +epidermal growth factor receptor | ||
269 | +glucagon like peptide-1 | ||
270 | +extracellular superoxide dismutase | ||
271 | +Chop | ||
272 | +EMT | ||
273 | +Smad2 | ||
274 | +ET-1 | ||
275 | +claudins-1, -3, and -5 | ||
276 | +Oct-4 | ||
277 | +Lrp5 | ||
278 | +extent, type B receptors | ||
279 | +IL-31 | ||
280 | +TGF beta1 | ||
281 | +integrin-linked kinase | ||
282 | +NFkB | ||
283 | +TGFBR2 | ||
284 | +PPAR-a | ||
285 | +PDGF-b | ||
286 | +transgelin | ||
287 | +HAI-1 | ||
288 | +Trx | ||
289 | +PAR-1 | ||
290 | +miR-338 | ||
291 | +n-cadherin | ||
292 | +interleukin-8 | ||
293 | +prostaglandin F PGF receptor | ||
294 | +collagen Col1a1 | ||
295 | +PHLPP | ||
296 | +FRNK | ||
297 | +thrombospondin-1 | ||
298 | +Semaphorin 7a | ||
299 | +signal transducer and activator of transcription 3 | ||
300 | +BMP-15 | ||
301 | +cyclooxygenase 2 | ||
302 | +Forkhead Box F1 | ||
303 | +HMGA2 | ||
304 | +b2 -AR | ||
305 | +CD34 | ||
306 | +pVHL | ||
307 | +BI-1 | ||
308 | +C1q | ||
309 | +Serpin B4 | ||
310 | +H19 | ||
311 | +STUB1 | ||
312 | +FoxP3 | ||
313 | +serum albumin HSA-thioredoxin 1 | ||
314 | +SOD3 | ||
315 | +p65 | ||
316 | +cytosolic phospholipase A2 | ||
317 | +TGF-b-1 | ||
318 | +Fstl1 | ||
319 | +ET-A | ||
320 | +PDGFR | ||
321 | +vimentin | ||
322 | +BMP-7 | ||
323 | +PDGF-B | ||
324 | +Rictor | ||
325 | +WISP1 | ||
326 | +interleukin-1beta | ||
327 | +mTOR | ||
328 | +focal adhesion kinase-related nonkinase | ||
329 | +TSLP | ||
330 | +IL-10 | ||
331 | +MMP-7 | ||
332 | +Transforming growth factor-beta1 | ||
333 | +Akt | ||
334 | +SpA | ||
335 | +CD11c | ||
336 | +Foxp-3 | ||
337 | +PARP | ||
338 | +STAT3 | ||
339 | +MMP2 | ||
340 | +PDGB | ||
341 | +tsp1 | ||
342 | +discoidin domain receptor 2 | ||
343 | +CD4 | ||
344 | +FGF-1 | ||
345 | +E-cadherin | ||
346 | +TGFb | ||
347 | +tenascin-C | ||
348 | +Transforming growth factor beta 1 | ||
349 | +Interleukin 17A | ||
350 | +PDGF-A | ||
351 | +SAP | ||
352 | +Transglutaminase 2 | ||
353 | +beta-gal | ||
354 | +smoothened | ||
355 | +miR-5100 | ||
356 | +alpha-smooth muscle actin | ||
357 | +bFGF | ||
358 | +connective tissue growth factor | ||
359 | +COL1A2 | ||
360 | +SRF | ||
361 | +Thymic stromal lymphopoietin | ||
362 | +TGF-beta | ||
363 | +tissue inhibitors of metalloproteinases-1 | ||
364 | +IL18 | ||
365 | +Janus kinase 2 | ||
366 | +ERK1/2 | ||
367 | +KL-6 | ||
368 | +CCN2 | ||
369 | +HO-1 | ||
370 | +endothelin type A receptors | ||
371 | +igf1 | ||
372 | +nuclear factor erythroid 2-related factor 2 | ||
373 | +MT2 | ||
374 | +C5aR | ||
375 | +CXCL1 | ||
376 | +COMP | ||
377 | +Mkl1 | ||
378 | +TbRII | ||
379 | +VASH-1 | ||
380 | +IGF-I | ||
381 | +Insulin-like growth factor binding protein-3 | ||
382 | +Collagen Triple Helix Repeat-Containing-1 | ||
383 | +TGFbeta1 | ||
384 | +CAV1 | ||
385 | +PEDF | ||
386 | +terminal deoxynucleotidyl transferase | ||
387 | +b2 -adrenoceptors | ||
388 | +X-linked inhibitor of apoptosis | ||
389 | +leucine-rich alpha-2 glycoprotein | ||
390 | +PAI1 | ||
391 | +CD55 | ||
392 | +miR-29a | ||
393 | +Sema 7a | ||
394 | +FRbeta | ||
395 | +Semaphorin-7A | ||
396 | +AT2 | ||
397 | +caveolin-1 | ||
398 | +V-ATPase | ||
399 | +poly-ADP ribose polymerase | ||
400 | +Egr-1 | ||
401 | +transforming growth factor beta-1 | ||
402 | +IL6 | ||
403 | +AP-1 | ||
404 | +Akt2 | ||
405 | +Endosialin | ||
406 | +phosphoglycerate dehydrogenase | ||
407 | +mPGES-1 | ||
408 | +CXCL12 | ||
409 | +Atg4b | ||
410 | +SNAI1 | ||
411 | +megakaryoblastic leukemia 1 | ||
412 | +acyl-CoA oxidase 1 | ||
413 | +STAT1 | ||
414 | +P53 | ||
415 | +pten | ||
416 | +Protease-activated receptor-1 | ||
417 | +cPLA2 | ||
418 | +Interleukin IL 8 | ||
419 | +Sgpl1 | ||
420 | +CD44 | ||
421 | +Snail | ||
422 | +Tb4 | ||
423 | +hyaluronan synthase 2 | ||
424 | +MMP-9 | ||
425 | +T beta RII | ||
426 | +Vascular endothelial growth factor | ||
427 | +JAK2 | ||
428 | +CD117 | ||
429 | +Tumor necrosis factor-alpha | ||
430 | +protease-activated receptor PAR-2 | ||
431 | +miR-9-5p | ||
432 | +Wt1 | ||
433 | +miR-487b | ||
434 | +Ost-4 | ||
435 | +WNT10A | ||
436 | +mir-155 | ||
437 | +HSP90 | ||
438 | +glucocorticoid receptor | ||
439 | +il17a | ||
440 | +serine protease | ||
441 | +IP-10 | ||
442 | +IgG1 | ||
443 | +alpha-SMA | ||
444 | +SMA | ||
445 | +matrix metalloproteinase-3 | ||
446 | +c-Jun | ||
447 | +TOB2 | ||
448 | +insulin-like growth factor-1 | ||
449 | +p63 | ||
450 | +WNT1-inducible signaling pathway protein 1 | ||
451 | +TGF-beta1 | ||
452 | +JunD | ||
453 | +CRP1 | ||
454 | +focal adhesion kinase | ||
455 | +AAG | ||
456 | +ARPC2 | ||
457 | +miR-127 | ||
458 | +monocyte chemoattractant protein 1 | ||
459 | +FAK | ||
460 | +Lin28B | ||
461 | +secreted protein acidic and rich in cysteine | ||
462 | +cartilage oligomeric matrix protein | ||
463 | +galectin-3 | ||
464 | +EMMPRIN | ||
465 | +ErbB2 | ||
466 | +Sulf2 | ||
467 | +SIRT6 | ||
468 | +NF-kB | ||
469 | +c-jun | ||
470 | +SMAD3 | ||
471 | +HDAC6 | ||
472 | +miR-455 | ||
473 | +periostin | ||
474 | +Renin | ||
475 | +protein kinase B | ||
476 | +PHGDH | ||
477 | +PDGF-A and -B | ||
478 | +Hepatocyte growth factor | ||
479 | +serum response factor | ||
480 | +FGF-2 | ||
481 | +MRTF-A | ||
482 | +CBP | ||
483 | +Mmp19 | ||
484 | +TGFb2 | ||
485 | +annexin V | ||
486 | +SDC2 | ||
487 | +IFN-gamma | ||
488 | +interleukin IL-1beta | ||
489 | +ORP150 | ||
490 | +BMP-8B | ||
491 | +TGFb1 | ||
492 | +CXCR3 | ||
493 | +transforming growth factor -b1 | ||
494 | +Transforming growth factor-beta 1 | ||
495 | +T-cell lymphoma invasion and metastasis 1 | ||
496 | +beclin 1 | ||
497 | +IL-18 | ||
498 | +fibroblast growth factor-2 | ||
499 | +p300 | ||
500 | +miR-382 | ||
501 | +IL-4 | ||
502 | +CD8 | ||
503 | +transforming growth factor-b | ||
504 | +Wilms' tumor 1 | ||
505 | +ERK | ||
506 | +Hsp90 | ||
507 | +Connective tissue growth factor | ||
508 | +IGFBP-2 | ||
509 | +endothelin-1 | ||
510 | +b-catenin | ||
511 | +mPAP | ||
512 | +matrix metalloproteinase MMP-9 | ||
513 | +PIAS4 | ||
514 | +plasminogen activator inhibitor-1 | ||
515 | +MicroRNA miR-221 | ||
516 | +b-FGF | ||
517 | +KCa3.1 | ||
518 | +YAP | ||
519 | +SphK | ||
520 | +CD248 | ||
521 | +C5a | ||
522 | +gremlin | ||
523 | +SFTPC | ||
524 | +CCR2 | ||
525 | +ACLP | ||
526 | +il12p40 | ||
527 | +fibronectin | ||
528 | +Col1a2 | ||
529 | +Gremlin | ||
530 | +TGF-b | ||
531 | +miR-410 | ||
532 | +Vasohibin-2 | ||
533 | +Cub domain containing protein 1 | ||
534 | +SOCS1 | ||
535 | +transforming growth factor TGF-beta1 | ||
536 | +TGF-beta 1 | ||
537 | +miR -221 | ||
538 | +Smad4 | ||
539 | +a-SMA | ||
540 | +BMP | ||
541 | +transforming growth factor-b1 | ||
542 | +CD46 | ||
543 | +matrix metalloproteinase-9 | ||
544 | +tgfb2 | ||
545 | +RAGE | ||
546 | +GR | ||
547 | +Itgb6 | ||
548 | +TGF- b | ||
549 | +vascular endothelial growth factor | ||
550 | +microRNA miR-155 | ||
551 | +peroxisome proliferator-activated receptor-y | ||
552 | +5-HTR1A/B and 5-HTR2B | ||
553 | +sL1 | ||
554 | +interleukin IL-1b | ||
555 | +Transforming growth factor-b1 | ||
556 | +Transforming growth factor b-1 | ||
557 | +TGFB1 | ||
558 | +miR-3107 | ||
559 | +Transforming growth factor b | ||
560 | +lymphotoxin beta receptor | ||
561 | +Smad 7 | ||
562 | +Stanniocalcin-1 | ||
563 | +IP10 | ||
564 | +LTBP] 1, 2, and 4 | ||
565 | +TG2 | ||
566 | +IL-17A | ||
567 | +SMAD 3 | ||
568 | +tumor necrosis factor alpha | ||
569 | +IL-8 | ||
570 | +cyclin D1 | ||
571 | +IL8, -6, and -1B | ||
572 | +150-kDa oxygen-regulated protein | ||
573 | +hypoxia-inducible factor-1a | ||
574 | +COX-2 | ||
575 | +Insulin-like growth factor-1 | ||
576 | +hepatocyte growth factor | ||
577 | +MiR-338 | ||
578 | +TLR4 | ||
579 | +CDCP1 | ||
580 | +ICAT | ||
581 | +BMPER | ||
582 | +VEGF | ||
583 | +MMP-2 | ||
584 | +IL10 | ||
585 | +TLR9 | ||
586 | +SMAD-3 | ||
587 | +CD68 | ||
588 | +IL-1b | ||
589 | +LRP5 | ||
590 | +caspase-3 | ||
591 | +CCl4 | ||
592 | +serpine1 | ||
593 | +IL-17 | ||
594 | +Nrf2 | ||
595 | +TGF -b1 |
dictionaries/genes_1grams.txt
0 → 100644
1 | +PTX-2 | ||
2 | +Elk1 | ||
3 | +SPP1 | ||
4 | +LC3 | ||
5 | +AT1 | ||
6 | +ATG4B | ||
7 | +EZH2 | ||
8 | +p38 | ||
9 | +TF | ||
10 | +MyD88 | ||
11 | +CD90 | ||
12 | +Endothelin-1 | ||
13 | +tagln | ||
14 | +IQGAP1 | ||
15 | +PINK1 | ||
16 | +miR-140 | ||
17 | +Th1 | ||
18 | +IGFBP-1 | ||
19 | +syndecan-2 | ||
20 | +IL-13 | ||
21 | +Nox-4 | ||
22 | +IGF-1 | ||
23 | +BMP3 | ||
24 | +TGF-alpha | ||
25 | +Periostin | ||
26 | +AKT | ||
27 | +activin | ||
28 | +GLP-1 | ||
29 | +IGF-2 | ||
30 | +HIF-1a | ||
31 | +ANGII | ||
32 | +ACE | ||
33 | +bmp1 | ||
34 | +RhoA | ||
35 | +HLF | ||
36 | +Muc5ac | ||
37 | +MK2 | ||
38 | +Bcl-2 | ||
39 | +let-7d | ||
40 | +VASH-2 | ||
41 | +HSP27 | ||
42 | +MMP1 | ||
43 | +TNF-a | ||
44 | +ECSOD | ||
45 | +Sulf1 | ||
46 | +MT1 | ||
47 | +CCN1 | ||
48 | +Thy-1 | ||
49 | +CD19 | ||
50 | +HAI-2 | ||
51 | +ALK5 | ||
52 | +mTORC2 | ||
53 | +PTEN | ||
54 | +BMPR2 | ||
55 | +PI3K | ||
56 | +Mknk2 | ||
57 | +mir-21 | ||
58 | +STIP1 | ||
59 | +TIMP-1 | ||
60 | +MT5-MMP | ||
61 | +HIF1a | ||
62 | +renin | ||
63 | +NEU1 | ||
64 | +MMP-1 | ||
65 | +SPARC | ||
66 | +Nox1 | ||
67 | +PEX13p | ||
68 | +C3a | ||
69 | +miR-31 | ||
70 | +MAP3K19 | ||
71 | +c-Fos | ||
72 | +ET-B | ||
73 | +USP11 | ||
74 | +smad2/3 | ||
75 | +TNFa | ||
76 | +PAI-1 | ||
77 | +Wnt5A | ||
78 | +IGFBP-3 | ||
79 | +VCAM-1 | ||
80 | +miR-326 | ||
81 | +p21 | ||
82 | +MKL1 | ||
83 | +HDAC10 | ||
84 | +ITGB6 | ||
85 | +LPA1 | ||
86 | +tgfbr1/2 | ||
87 | +YY1 | ||
88 | +Caveolin-1 | ||
89 | +TNC | ||
90 | +TGFB | ||
91 | +S1P | ||
92 | +Vimentin | ||
93 | +DDR2 | ||
94 | +p21waf1 | ||
95 | +IL-1beta | ||
96 | +NOX4 | ||
97 | +miR-134 | ||
98 | +lymphotactin | ||
99 | +TGFbeta | ||
100 | +Keap1 | ||
101 | +MT3 | ||
102 | +MMP-3 | ||
103 | +CUX1 | ||
104 | +LEF/TCF | ||
105 | +MCP-1 | ||
106 | +PPAR | ||
107 | +TbetaRII | ||
108 | +miR-30a | ||
109 | +TNFSF14 | ||
110 | +CD206 | ||
111 | +CTGF | ||
112 | +Galectin-3 | ||
113 | +ACTA2 | ||
114 | +Osteopontin | ||
115 | +TGF-b1 | ||
116 | +SGPL1 | ||
117 | +Smad3 | ||
118 | +NOS | ||
119 | +CXCL9 | ||
120 | +beta-catenin | ||
121 | +STC1 | ||
122 | +follistatin | ||
123 | +IL8 | ||
124 | +miR-424 | ||
125 | +Pentraxin-2 | ||
126 | +miR-21 | ||
127 | +TRPV4 | ||
128 | +FOXF1 | ||
129 | +thrombin | ||
130 | +ALK-5 | ||
131 | +ZO-1 | ||
132 | +C3aR | ||
133 | +SNAI2 | ||
134 | +TIAM1 | ||
135 | +SMAD2/3 | ||
136 | +TGFb-1 | ||
137 | +miR | ||
138 | +HSP47 | ||
139 | +RANTES | ||
140 | +TNF-alpha | ||
141 | +YKL-40 | ||
142 | +Smad2/3 | ||
143 | +AKT2 | ||
144 | +Nox4 | ||
145 | +CXCL10 | ||
146 | +BMP-5 | ||
147 | +IFN-gammaR | ||
148 | +miR-1343 | ||
149 | +Rpn6 | ||
150 | +ltbp1/2 | ||
151 | +IL-6 | ||
152 | +CCN5 | ||
153 | +NOX-2 | ||
154 | +Stat3 | ||
155 | +NOX-4 | ||
156 | +FIEL1 | ||
157 | +miR-154 | ||
158 | +Sema7a | ||
159 | +PEX13 | ||
160 | +COL1A1 | ||
161 | +TNFalpha | ||
162 | +Matriptase | ||
163 | +EGFR | ||
164 | +HGF | ||
165 | +Bax | ||
166 | +interleukin-6 | ||
167 | +CCL2 | ||
168 | +MMP-12 | ||
169 | +IKKa | ||
170 | +miR-26a | ||
171 | +SMAD2 | ||
172 | +matriptase | ||
173 | +semaphorin-7A | ||
174 | +Syndecan-2 | ||
175 | +ILK | ||
176 | +beta-galactosidase | ||
177 | +LRG | ||
178 | +Cthrc1 | ||
179 | +MAPKAPK2 | ||
180 | +JNK | ||
181 | +CD25 | ||
182 | +PAR-2 | ||
183 | +Activin | ||
184 | +BCL-2 | ||
185 | +BARD1 | ||
186 | +MIG | ||
187 | +Chop | ||
188 | +EMT | ||
189 | +Smad2 | ||
190 | +ET-1 | ||
191 | +Oct-4 | ||
192 | +Lrp5 | ||
193 | +IL-31 | ||
194 | +NFkB | ||
195 | +TGFBR2 | ||
196 | +PPAR-a | ||
197 | +PDGF-b | ||
198 | +transgelin | ||
199 | +HAI-1 | ||
200 | +Trx | ||
201 | +PAR-1 | ||
202 | +miR-338 | ||
203 | +n-cadherin | ||
204 | +interleukin-8 | ||
205 | +PHLPP | ||
206 | +FRNK | ||
207 | +thrombospondin-1 | ||
208 | +BMP-15 | ||
209 | +HMGA2 | ||
210 | +CD34 | ||
211 | +pVHL | ||
212 | +BI-1 | ||
213 | +C1q | ||
214 | +H19 | ||
215 | +STUB1 | ||
216 | +FoxP3 | ||
217 | +SOD3 | ||
218 | +p65 | ||
219 | +TGF-b-1 | ||
220 | +Fstl1 | ||
221 | +ET-A | ||
222 | +PDGFR | ||
223 | +vimentin | ||
224 | +BMP-7 | ||
225 | +PDGF-B | ||
226 | +Rictor | ||
227 | +WISP1 | ||
228 | +interleukin-1beta | ||
229 | +mTOR | ||
230 | +TSLP | ||
231 | +IL-10 | ||
232 | +MMP-7 | ||
233 | +Akt | ||
234 | +SpA | ||
235 | +CD11c | ||
236 | +Foxp-3 | ||
237 | +PARP | ||
238 | +STAT3 | ||
239 | +MMP2 | ||
240 | +PDGB | ||
241 | +tsp1 | ||
242 | +CD4 | ||
243 | +FGF-1 | ||
244 | +E-cadherin | ||
245 | +TGFb | ||
246 | +tenascin-C | ||
247 | +PDGF-A | ||
248 | +SAP | ||
249 | +beta-gal | ||
250 | +smoothened | ||
251 | +miR-5100 | ||
252 | +bFGF | ||
253 | +COL1A2 | ||
254 | +SRF | ||
255 | +TGF-beta | ||
256 | +IL18 | ||
257 | +ERK1/2 | ||
258 | +KL-6 | ||
259 | +CCN2 | ||
260 | +HO-1 | ||
261 | +igf1 | ||
262 | +MT2 | ||
263 | +C5aR | ||
264 | +CXCL1 | ||
265 | +COMP | ||
266 | +Mkl1 | ||
267 | +TbRII | ||
268 | +VASH-1 | ||
269 | +IGF-I | ||
270 | +TGFbeta1 | ||
271 | +CAV1 | ||
272 | +PEDF | ||
273 | +PAI1 | ||
274 | +CD55 | ||
275 | +miR-29a | ||
276 | +FRbeta | ||
277 | +Semaphorin-7A | ||
278 | +AT2 | ||
279 | +caveolin-1 | ||
280 | +V-ATPase | ||
281 | +Egr-1 | ||
282 | +IL6 | ||
283 | +AP-1 | ||
284 | +Akt2 | ||
285 | +Endosialin | ||
286 | +mPGES-1 | ||
287 | +CXCL12 | ||
288 | +Atg4b | ||
289 | +SNAI1 | ||
290 | +STAT1 | ||
291 | +P53 | ||
292 | +pten | ||
293 | +cPLA2 | ||
294 | +Sgpl1 | ||
295 | +CD44 | ||
296 | +Snail | ||
297 | +Tb4 | ||
298 | +MMP-9 | ||
299 | +JAK2 | ||
300 | +CD117 | ||
301 | +miR-9-5p | ||
302 | +Wt1 | ||
303 | +miR-487b | ||
304 | +Ost-4 | ||
305 | +WNT10A | ||
306 | +mir-155 | ||
307 | +HSP90 | ||
308 | +il17a | ||
309 | +IP-10 | ||
310 | +IgG1 | ||
311 | +alpha-SMA | ||
312 | +SMA | ||
313 | +c-Jun | ||
314 | +TOB2 | ||
315 | +p63 | ||
316 | +TGF-beta1 | ||
317 | +JunD | ||
318 | +CRP1 | ||
319 | +AAG | ||
320 | +ARPC2 | ||
321 | +miR-127 | ||
322 | +FAK | ||
323 | +Lin28B | ||
324 | +galectin-3 | ||
325 | +EMMPRIN | ||
326 | +ErbB2 | ||
327 | +Sulf2 | ||
328 | +SIRT6 | ||
329 | +NF-kB | ||
330 | +c-jun | ||
331 | +SMAD3 | ||
332 | +HDAC6 | ||
333 | +miR-455 | ||
334 | +periostin | ||
335 | +Renin | ||
336 | +PHGDH | ||
337 | +FGF-2 | ||
338 | +MRTF-A | ||
339 | +CBP | ||
340 | +Mmp19 | ||
341 | +TGFb2 | ||
342 | +SDC2 | ||
343 | +IFN-gamma | ||
344 | +ORP150 | ||
345 | +BMP-8B | ||
346 | +TGFb1 | ||
347 | +CXCR3 | ||
348 | +IL-18 | ||
349 | +p300 | ||
350 | +miR-382 | ||
351 | +IL-4 | ||
352 | +CD8 | ||
353 | +ERK | ||
354 | +Hsp90 | ||
355 | +IGFBP-2 | ||
356 | +endothelin-1 | ||
357 | +b-catenin | ||
358 | +mPAP | ||
359 | +PIAS4 | ||
360 | +b-FGF | ||
361 | +KCa3.1 | ||
362 | +YAP | ||
363 | +SphK | ||
364 | +CD248 | ||
365 | +C5a | ||
366 | +gremlin | ||
367 | +SFTPC | ||
368 | +CCR2 | ||
369 | +ACLP | ||
370 | +il12p40 | ||
371 | +fibronectin | ||
372 | +Col1a2 | ||
373 | +Gremlin | ||
374 | +TGF-b | ||
375 | +miR-410 | ||
376 | +Vasohibin-2 | ||
377 | +SOCS1 | ||
378 | +Smad4 | ||
379 | +a-SMA | ||
380 | +BMP | ||
381 | +CD46 | ||
382 | +tgfb2 | ||
383 | +RAGE | ||
384 | +GR | ||
385 | +Itgb6 | ||
386 | +sL1 | ||
387 | +TGFB1 | ||
388 | +miR-3107 | ||
389 | +Stanniocalcin-1 | ||
390 | +IP10 | ||
391 | +TG2 | ||
392 | +IL-17A | ||
393 | +IL-8 | ||
394 | +COX-2 | ||
395 | +MiR-338 | ||
396 | +TLR4 | ||
397 | +CDCP1 | ||
398 | +ICAT | ||
399 | +BMPER | ||
400 | +VEGF | ||
401 | +MMP-2 | ||
402 | +IL10 | ||
403 | +TLR9 | ||
404 | +SMAD-3 | ||
405 | +CD68 | ||
406 | +IL-1b | ||
407 | +LRP5 | ||
408 | +caspase-3 | ||
409 | +CCl4 | ||
410 | +serpine1 | ||
411 | +IL-17 | ||
412 | +Nrf2 |
dictionaries/genes_2grams.txt
0 → 100644
1 | +protease-activated receptor-2 | ||
2 | +Lefty A | ||
3 | +interleukin IL-13 | ||
4 | +heme oxygenase-1 | ||
5 | +Serpin B3/B4 | ||
6 | +Spiruchostatin A | ||
7 | +histone deacetylase | ||
8 | +cyclosporine A | ||
9 | +N -cadherin | ||
10 | +Bax inhibitor-1 | ||
11 | +matrix metalloproteinase-7 | ||
12 | +miR-17 92 | ||
13 | +Membrane-type MT-MMPs | ||
14 | +interleukin IL-6 | ||
15 | +cytokeratin 19 | ||
16 | +tissue factor | ||
17 | +Angiotensin II | ||
18 | +lysyl oxidase | ||
19 | +phosphoinositide 3-kinase | ||
20 | +matrix metalloprotease-1 | ||
21 | +Serpin B3 | ||
22 | +Thymosin b4 | ||
23 | +E -cadherin | ||
24 | +Fas ligand | ||
25 | +TGF beta1 | ||
26 | +integrin-linked kinase | ||
27 | +collagen Col1a1 | ||
28 | +Semaphorin 7a | ||
29 | +cyclooxygenase 2 | ||
30 | +b2 -AR | ||
31 | +Serpin B4 | ||
32 | +Interleukin 17A | ||
33 | +Transglutaminase 2 | ||
34 | +b2 -adrenoceptors | ||
35 | +Sema 7a | ||
36 | +phosphoglycerate dehydrogenase | ||
37 | +Protease-activated receptor-1 | ||
38 | +glucocorticoid receptor | ||
39 | +serine protease | ||
40 | +matrix metalloproteinase-3 | ||
41 | +annexin V | ||
42 | +interleukin IL-1beta | ||
43 | +beclin 1 | ||
44 | +MicroRNA miR-221 | ||
45 | +TGF-beta 1 | ||
46 | +miR -221 | ||
47 | +matrix metalloproteinase-9 | ||
48 | +TGF- b | ||
49 | +microRNA miR-155 | ||
50 | +interleukin IL-1b | ||
51 | +Smad 7 | ||
52 | +SMAD 3 | ||
53 | +cyclin D1 | ||
54 | +hypoxia-inducible factor-1a | ||
55 | +TGF -b1 |
dictionaries/genes_3grams.txt
0 → 100644
1 | +insulin-like growth factor-I | ||
2 | +bone morphogenetic protein | ||
3 | +transforming growth factor-beta | ||
4 | +superoxide dismutase 3 | ||
5 | +Histone deacetylase 6 | ||
6 | +tumor necrosis factor-alpha | ||
7 | +hypoxia-inducible factor 1a | ||
8 | +transforming growth factor-beta1 | ||
9 | +folate receptor beta | ||
10 | +smooth muscle a-actin | ||
11 | +Jun NH2-terminal kinase | ||
12 | +serum amyloid P | ||
13 | +NADPH oxidase 4 | ||
14 | +Toll-like receptor 4 | ||
15 | +ANG converting enzyme | ||
16 | +C/EBP homologous protein | ||
17 | +Cysteine-rich protein 1 | ||
18 | +a-smooth muscle actin | ||
19 | +Yin Yang 1 | ||
20 | +Transforming growth factor-b | ||
21 | +Aortic carboxypeptidase-like protein | ||
22 | +Pigment epithelium-derived factor | ||
23 | +Transforming growth factor-beta | ||
24 | +beta 1 integrin | ||
25 | +Toll-like receptor 9 | ||
26 | +glucagon like peptide-1 | ||
27 | +extracellular superoxide dismutase | ||
28 | +Forkhead Box F1 | ||
29 | +cytosolic phospholipase A2 | ||
30 | +Transforming growth factor-beta1 | ||
31 | +alpha-smooth muscle actin | ||
32 | +Thymic stromal lymphopoietin | ||
33 | +Janus kinase 2 | ||
34 | +terminal deoxynucleotidyl transferase | ||
35 | +leucine-rich alpha-2 glycoprotein | ||
36 | +poly-ADP ribose polymerase | ||
37 | +megakaryoblastic leukemia 1 | ||
38 | +acyl-CoA oxidase 1 | ||
39 | +Interleukin IL 8 | ||
40 | +hyaluronan synthase 2 | ||
41 | +T beta RII | ||
42 | +Tumor necrosis factor-alpha | ||
43 | +protease-activated receptor PAR-2 | ||
44 | +insulin-like growth factor-1 | ||
45 | +focal adhesion kinase | ||
46 | +protein kinase B | ||
47 | +PDGF-A and -B | ||
48 | +Hepatocyte growth factor | ||
49 | +serum response factor | ||
50 | +fibroblast growth factor-2 | ||
51 | +transforming growth factor-b | ||
52 | +Wilms' tumor 1 | ||
53 | +matrix metalloproteinase MMP-9 | ||
54 | +plasminogen activator inhibitor-1 | ||
55 | +transforming growth factor-b1 | ||
56 | +peroxisome proliferator-activated receptor-y | ||
57 | +5-HTR1A/B and 5-HTR2B | ||
58 | +Transforming growth factor-b1 | ||
59 | +lymphotoxin beta receptor | ||
60 | +150-kDa oxygen-regulated protein | ||
61 | +Insulin-like growth factor-1 | ||
62 | +hepatocyte growth factor |
dictionaries/genes_4grams.txt
0 → 100644
1 | +Wnt1-inducible signaling protein 1 | ||
2 | +Janus kinase type 2 | ||
3 | +transforming growth factor beta | ||
4 | +transforming growth factor b-1 | ||
5 | +Transforming growth factor TGF-beta1 | ||
6 | +Krebs Von Den Lungen-6 | ||
7 | +CC chemokine receptor 2 | ||
8 | +transforming growth factor b | ||
9 | +Transforming growth factor beta1 | ||
10 | +Transforming growth factor beta | ||
11 | +Transforming growth factor TGF-b1 | ||
12 | +bone morphogenetic protein 7 | ||
13 | +transforming growth factor-beta 1 | ||
14 | +insulin-like growth factor I | ||
15 | +plasminogen activator inhibitor 1 | ||
16 | +Extracellular Matrix Metalloproteinase Inducer | ||
17 | +transforming growth factor b1 | ||
18 | +transforming growth factor beta1 | ||
19 | +epidermal growth factor receptor | ||
20 | +claudins-1, -3, and -5 | ||
21 | +extent, type B receptors | ||
22 | +prostaglandin F PGF receptor | ||
23 | +serum albumin HSA-thioredoxin 1 | ||
24 | +focal adhesion kinase-related nonkinase | ||
25 | +discoidin domain receptor 2 | ||
26 | +connective tissue growth factor | ||
27 | +tissue inhibitors of metalloproteinases-1 | ||
28 | +endothelin type A receptors | ||
29 | +Collagen Triple Helix Repeat-Containing-1 | ||
30 | +X-linked inhibitor of apoptosis | ||
31 | +transforming growth factor beta-1 | ||
32 | +Vascular endothelial growth factor | ||
33 | +monocyte chemoattractant protein 1 | ||
34 | +cartilage oligomeric matrix protein | ||
35 | +transforming growth factor -b1 | ||
36 | +Transforming growth factor-beta 1 | ||
37 | +Connective tissue growth factor | ||
38 | +transforming growth factor TGF-beta1 | ||
39 | +vascular endothelial growth factor | ||
40 | +Transforming growth factor b-1 | ||
41 | +Transforming growth factor b | ||
42 | +tumor necrosis factor alpha | ||
43 | +IL8, -6, and -1B |
dictionaries/genes_5grams.txt
0 → 100644
1 | +Enhancer of zeste homolog 2 | ||
2 | +transforming growth factor beta 1 | ||
3 | +transforming growth factor TGF-beta 1 | ||
4 | +fibroblast growth factor receptor 2 | ||
5 | +3-hydroxy-3-methylglutaryl CoenzymeA HMG CoA reductase | ||
6 | +Mitogen-activated protein kinase-activated protein kinase-2 | ||
7 | +transient receptor potential vanilloid 4 | ||
8 | +High mobility group AT-hook 2 | ||
9 | +latent membrane protein LMP 1 | ||
10 | +mothers against decapentaplegic homolog 3 | ||
11 | +transforming growth factor b expression | ||
12 | +suppressor of cytokine signaling 1 | ||
13 | +Transforming growth factor beta 1 | ||
14 | +Insulin-like growth factor binding protein-3 | ||
15 | +WNT1-inducible signaling pathway protein 1 | ||
16 | +Cub domain containing protein 1 | ||
17 | +LTBP] 1, 2, and 4 |
dictionaries/genes_6grams.txt
0 → 100644
dictionaries/genes_7grams.txt
0 → 100644
dictionaries/genes_8grams.txt
0 → 100644
1 | +platelet-derived growth factor isoforms PDGF A and B |
dictionaries/termFilesLength.json
0 → 100644
1 | +{ | ||
2 | + "listTermFiles": { | ||
3 | + "2": ["genes_2grams.txt"], | ||
4 | + "3": ["genes_3grams.txt"], | ||
5 | + "4": ["genes_4grams.txt"], | ||
6 | + "5": ["genes_5grams.txt"] | ||
7 | + "6": ["genes_6grams.txt"] | ||
8 | + "7": ["genes_7grams.txt"] | ||
9 | + "8": ["genes_8grams.txt"] | ||
10 | + }, | ||
11 | + "listTerms": { | ||
12 | + "2": [], | ||
13 | + "3": [], | ||
14 | + "4": [], | ||
15 | + "5": [] | ||
16 | + "6": [], | ||
17 | + "7": [], | ||
18 | + "8": [], | ||
19 | + } | ||
20 | +} |
dictionaries/termFilesTag.json
0 → 100644
1 | +{ | ||
2 | + "hashTermFiles": { | ||
3 | + "GENE": ["genes_1grams.txt", "genes_2grams.txt", "genes_3grams.txt", "genes_4grams.txt", "genes_5grams.txt", "genes_6grams.txt", "genes_7grams.txt", "genes_8grams.txt"] | ||
4 | + }, | ||
5 | + "hashTerms": { | ||
6 | + "GENE": [] | ||
7 | + }, | ||
8 | + "hashTagAspect": { | ||
9 | + "DFAM": "DOM", | ||
10 | + "MF": "DOM", | ||
11 | + "RP": "RP", | ||
12 | + "DPOS": "DOM", | ||
13 | + "DMOT": "DOM" | ||
14 | + } | ||
15 | +} | ||
... | \ No newline at end of file | ... | \ No newline at end of file |
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