Carlos-Francisco Méndez-Cruz / lcg-bioinfoI-bionlp

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Carlos-Francisco Méndez-Cruz
f8d4ab34 1 parent f14e3e4b

Training, crossvalidation and testing structural domain dataset

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Showing 1 changed file with 6 additions and 3 deletions
...@@ -292,9 +292,12 @@ if __name__ == "__main__": ...@@ -292,9 +292,12 @@ if __name__ == "__main__":
292 oFile.write('Classifier: {}\n'.format(args.classifier)) 292 oFile.write('Classifier: {}\n'.format(args.classifier))
293 oFile.write('Kernel: {}\n'.format(args.kernel)) 293 oFile.write('Kernel: {}\n'.format(args.kernel))
294 oFile.write('Accuracy: {}\n'.format(accuracy_score(y_test, y_pred))) 294 oFile.write('Accuracy: {}\n'.format(accuracy_score(y_test, y_pred)))
295 - oFile.write('Precision: {}\n'.format(precision_score(y_test, y_pred, average='weighted'))) 295 + #oFile.write('Precision: {}\n'.format(precision_score(y_test, y_pred, average='weighted')))
296 - oFile.write('Recall: {}\n'.format(recall_score(y_test, y_pred, average='weighted'))) 296 + #oFile.write('Recall: {}\n'.format(recall_score(y_test, y_pred, average='weighted')))
297 - oFile.write('F-score: {}\n'.format(f1_score(y_test, y_pred, average='weighted'))) 297 + #oFile.write('F-score: {}\n'.format(f1_score(y_test, y_pred, average='weighted')))
298 + oFile.write('Precision: {}\n'.format(precision_score(y_test, y_pred)))
299 + oFile.write('Recall: {}\n'.format(recall_score(y_test, y_pred)))
300 + oFile.write('F-score: {}\n'.format(f1_score(y_test, y_pred)))
298 oFile.write('Confusion matrix: \n') 301 oFile.write('Confusion matrix: \n')
299 oFile.write(str(confusion_matrix(y_test, y_pred)) + '\n') 302 oFile.write(str(confusion_matrix(y_test, y_pred)) + '\n')
300 oFile.write('Classification report: \n') 303 oFile.write('Classification report: \n')
......