Carlos-Francisco Méndez-Cruz / lcg-bioinfoI-bionlp

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Carlos-Francisco Méndez-Cruz
da3df41d 1 parent 76002c74

Training, crossvalidation and testing dataset

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...@@ -38,7 +38,7 @@ __author__ = 'CMendezC' ...@@ -38,7 +38,7 @@ __author__ = 'CMendezC'
38 38
39 # Execution: 39 # Execution:
40 40
41 -# python training-crossvalidation-testing-binding-thrombin.py 41 +# python imb-training-testing-binding-thrombin.py
42 # --inputPath /home/compu2/bionlp/lcg-bioinfoI-bionlp/clasificacion-automatica/binding-thrombin-dataset 42 # --inputPath /home/compu2/bionlp/lcg-bioinfoI-bionlp/clasificacion-automatica/binding-thrombin-dataset
43 # --inputTrainingData thrombin.data 43 # --inputTrainingData thrombin.data
44 # --inputTestingData Thrombin.testset 44 # --inputTestingData Thrombin.testset
...@@ -53,7 +53,10 @@ __author__ = 'CMendezC' ...@@ -53,7 +53,10 @@ __author__ = 'CMendezC'
53 # --imbalanced RandomUS 53 # --imbalanced RandomUS
54 54
55 # source activate python3 55 # source activate python3
56 -# python training-crossvalidation-testing-binding-thrombin.py --inputPath /home/compu2/bionlp/lcg-bioinfoI-bionlp/clasificacion-automatica/binding-thrombin-dataset --inputTrainingData thrombin.data --inputTestingData Thrombin.testset --inputTestingClasses Thrombin.testset.class --outputModelPath /home/compu2/bionlp/lcg-bioinfoI-bionlp/clasificacion-automatica/binding-thrombin-dataset/models --outputModelFile SVM-lineal-model.mod --outputReportPath /home/compu2/bionlp/lcg-bioinfoI-bionlp/clasificacion-automatica/binding-thrombin-dataset/reports --outputReportFile SVM-lineal.txt --classifier SVM --kernel linear --imbalanced RandomUS 56 +# python imb-training-testing-binding-thrombin.py --inputPath /home/compu2/bionlp/lcg-bioinfoI-bionlp/clasificacion-automatica/binding-thrombin-dataset --inputTrainingData thrombin.data --inputTestingData Thrombin.testset --inputTestingClasses Thrombin.testset.class --outputModelPath /home/compu2/bionlp/lcg-bioinfoI-bionlp/clasificacion-automatica/binding-thrombin-dataset/models --outputModelFile SVM-lineal-model.mod --outputReportPath /home/compu2/bionlp/lcg-bioinfoI-bionlp/clasificacion-automatica/binding-thrombin-dataset/reports --outputReportFile SVM-lineal.txt --classifier SVM --kernel linear
57 +
58 +
59 +# --imbalanced RandomUS
57 60
58 ########################################################### 61 ###########################################################
59 # MAIN PROGRAM # 62 # MAIN PROGRAM #
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