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Carlos-Francisco Méndez-Cruz
/
lcg-bioinfoI-bionlp
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Authored by
Carlos-Francisco Méndez-Cruz
2019-04-09 12:36:41 -0500
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38b4c905f023d0a55a3d64a6f7badb8133fce627
38b4c905
1 parent
b0a6c412
Iris dataset for automatic clasification
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clasificacion-automatica/iris-dataset/trainingEvaluation_Iris_v1.py
clasificacion-automatica/iris-dataset/trainingEvaluation_Iris_v1.py
View file @
38b4c90
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@@ -7,6 +7,7 @@ from sklearn.naive_bayes import MultinomialNB
from
sklearn.tree
import
DecisionTreeClassifier
from
sklearn.svm
import
SVC
from
sklearn.neural_network
import
MLPClassifier
from
sklearn.linear_model
import
Perceptron
from
sklearn.metrics
import
accuracy_score
,
precision_score
,
recall_score
,
f1_score
,
confusion_matrix
,
\
classification_report
import
sys
...
...
@@ -23,7 +24,7 @@ __author__ = 'CMendezC'
# 5) --inputEvaluationClasses File to read test true classes.
# 6) --outputPath Path to place output files.
# 7) --outputFile File to place evaluation report.
# 8) --classifier Classifier: MultinomialNB, SVM, DecisionTree, MLPClassifier.
# 8) --classifier Classifier: MultinomialNB, SVM, DecisionTree,
Perceptron,
MLPClassifier.
# Ouput:
# 1) Evaluation report.
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@@ -41,6 +42,7 @@ __author__ = 'CMendezC'
# python trainingEvaluation_Iris_v1.py --inputPath /home/cmendezc/borrame/lcg-bioinfoI-bionlp/clasificacion-automatica/iris-dataset --inputTrainingData training_Data.txt --inputTrainingClasses training_TrueClasses.txt --inputEvaluationData test_Data.txt --inputEvaluationClasses test_TrueClasses.txt --outputPath /home/cmendezc/borrame/lcg-bioinfoI-bionlp/clasificacion-automatica/iris-dataset/reports --outputFile report-Iris-MLPClassifier.txt --classifier MLPClassifier
# python3 trainingEvaluation_Iris_v1.py --inputPath /home/cmendezc/gitlab_repositories/lcg-bioinfoI-bionlp/clasificacion-automatica/iris-dataset --inputTrainingData training_Data.txt --inputTrainingClasses training_TrueClasses.txt --inputEvaluationData test_Data.txt --inputEvaluationClasses test_TrueClasses.txt --outputPath /home/cmendezc/gitlab_repositories/lcg-bioinfoI-bionlp/clasificacion-automatica/iris-dataset/reports --outputFile report-Iris-MLPClassifier.txt --classifier MLPClassifier
# python3 trainingEvaluation_Iris_v1.py --inputPath /home/cmendezc/gitlab_repositories/lcg-bioinfoI-bionlp/clasificacion-automatica/iris-dataset --inputTrainingData training_Data.txt --inputTrainingClasses training_TrueClasses.txt --inputEvaluationData test_Data.txt --inputEvaluationClasses test_TrueClasses.txt --outputPath /home/cmendezc/gitlab_repositories/lcg-bioinfoI-bionlp/clasificacion-automatica/iris-dataset/reports --outputFile report-Iris-Perceptron.txt --classifier Perceptron
###########################################################
# MAIN PROGRAM #
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@@ -134,10 +136,11 @@ if __name__ == "__main__":
classifier
=
SVC
()
elif
options
.
classifier
==
"DecisionTree"
:
classifier
=
DecisionTreeClassifier
()
elif
options
.
classifier
==
"Perceptron"
:
classifier
=
Perceptron
()
elif
options
.
classifier
==
"MLPClassifier"
:
classifier
=
MLPClassifier
(
solver
=
'lbfgs'
,
hidden_layer_sizes
=
(
3
))
print
(
" Training..."
)
classifier
.
fit
(
dataTraining
,
trueTrainingClasses
)
print
(
" Prediction..."
)
...
...
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