Deep Learning Workshop

@@ -8,23 +8,23 @@
 # Each sequence as a one-hot encoding WHAT array or matrix
 
 # Run:
-# python3 get-hga-training-test-py27-v1.py
+# python3 get-hga-training-test-py27-v2.py
 # --inputFile hga-sequences-toy.txt
 # --inputPath /home/cmendezc/gitlab-deep-learning-workshop/data-sets/human-genome-annotation
 # --outputTraining hga-sequences-training.txt
 # --outputTest hga-sequences-test.txt
 # --outputPath /home/cmendezc/gitlab-deep-learning-workshop/data-sets/human-genome-annotation
-# python get-hga-training-test-py3.py --inputFile hga-sequences-1000.txt --inputPath /home/cmendezc/gitlab-deep-learning-workshop/data-sets/human-genome-annotation --outputTraining hga-sequences-training.txt --outputTest hga-sequences-test.txt --outputPath /home/cmendezc/gitlab-deep-learning-workshop/data-sets/human-genome-annotation
+# python get-hga-training-test-py27-v2.py --inputFile hga-sequences-1000.txt --inputPath /home/cmendezc/gitlab-deep-learning-workshop/data-sets/human-genome-annotation --outputTraining hga-sequences-training.txt --outputTest hga-sequences-test.txt --outputPath /home/cmendezc/gitlab-deep-learning-workshop/data-sets/human-genome-annotation
 
 # LAVIS
 # qlogin
-# python get-hga-training-test-py27-v1.py
+# python get-hga-training-test-py27-v2.py
 # --inputFile hga-sequences-1000.txt
 # --inputPath /mnt/Genoma/amedina/cmendez/gitlab-deep-learning-workshop/data-sets/human-genome-annotation
 # --outputTraining hga-sequences-training.txt
 # --outputTest hga-sequences-test.txt
 # --outputPath /mnt/Genoma/amedina/cmendez/gitlab-deep-learning-workshop/data-sets/human-genome-annotation
-# python get-hga-training-test-py27-v1.py --inputFile hga-sequences-toy.txt --inputPath /mnt/Genoma/amedina/cmendez/gitlab-deep-learning-workshop/data-sets/human-genome-annotation --outputTraining hga-sequences-training.txt --outputTest hga-sequences-test.txt --outputPath /mnt/Genoma/amedina/cmendez/gitlab-deep-learning-workshop/data-sets/human-genome-annotation
+# python get-hga-training-test-py27-v2.py --inputFile hga-sequences-toy.txt --inputPath /mnt/Genoma/amedina/cmendez/gitlab-deep-learning-workshop/data-sets/human-genome-annotation --outputTraining hga-sequences-training.txt --outputTest hga-sequences-test.txt --outputPath /mnt/Genoma/amedina/cmendez/gitlab-deep-learning-workshop/data-sets/human-genome-annotation
 
 import argparse
 import pandas as pd
@@ -105,6 +105,7 @@ if __name__ == "__main__":
             sequence_adjust = sequence + 'ACGTX'
             
     '''
+
     # One-hot-encoding of sequences
     for sequence, label in zip(sequences, labels):
         sequence_adjust = sequence + 'ACGTX'