Carlos-Francisco Méndez-Cruz / deep-learning-workshop

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Carlos-Francisco Méndez-Cruz
dc0e4cbb 1 parent 7a86d075

Deep Learning Workshop

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Showing 1 changed file with 4 additions and 2 deletions
...@@ -87,12 +87,12 @@ if __name__ == "__main__": ...@@ -87,12 +87,12 @@ if __name__ == "__main__":
87 for sequence, label in zip(sequences, labels): 87 for sequence, label in zip(sequences, labels):
88 if label == "exon": 88 if label == "exon":
89 count_exon += 1 89 count_exon += 1
90 - total_exon_length += total_exon_length 90 + total_exon_length += len(sequence)
91 if len(sequence) > max_exon_length: 91 if len(sequence) > max_exon_length:
92 max_exon_length = len(sequence) 92 max_exon_length = len(sequence)
93 elif label == "utr": 93 elif label == "utr":
94 count_utr += 1 94 count_utr += 1
95 - total_utr_length += total_utr_length 95 + total_utr_length += len(sequence)
96 if len(sequence) > max_utr_length: 96 if len(sequence) > max_utr_length:
97 max_utr_length = len(sequence) 97 max_utr_length = len(sequence)
98 print("Max exon length: {}".format(max_exon_length)) 98 print("Max exon length: {}".format(max_exon_length))
...@@ -101,6 +101,8 @@ if __name__ == "__main__": ...@@ -101,6 +101,8 @@ if __name__ == "__main__":
101 print("Count utr: {}".format(count_utr)) 101 print("Count utr: {}".format(count_utr))
102 print("Total exon length: {}".format(total_exon_length)) 102 print("Total exon length: {}".format(total_exon_length))
103 print("Total utr length: {}".format(total_utr_length)) 103 print("Total utr length: {}".format(total_utr_length))
104 + print("Media exon length: {}".format(total_exon_length/count_exon))
105 + print("Media utr length: {}".format(total_utr_length/count_utr))
104 106
105 quit() 107 quit()
106 108
......