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1 | # Bacterial regulatory interaction extraction system | 1 | # Bacterial regulatory interaction extraction system |
2 | 2 | ||
3 | ## Prerequisites | 3 | ## Prerequisites |
4 | -1. Input file must be tokenized and sentence split | 4 | +1. Input file must be tokenized, sentence split, and POS tagged |
5 | - | 5 | +2. Input files must be in two representations: |
6 | - | 6 | +- Only words |
7 | - | 7 | +- word|lemma|POS |
8 | +3. iSimp | ||
9 | +3. CoreNLP | ||
8 | 10 | ||
9 | ## Run | 11 | ## Run |
10 | -### Several files | 12 | +Set filenames and paths in [run-bries.sh]() |
11 | -Set filenames and paths in run-several-files.sh | ||
12 | 13 | ||
13 | ## Acknowledgments | 14 | ## Acknowledgments |
14 | This work was supported by UNAM-PAPIIT IA203420. | 15 | This work was supported by UNAM-PAPIIT IA203420. |
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