Carlos-Francisco Méndez-Cruz / automatic-extraction-growth-conditions

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Estefani Gaytan Nunez
900a2bac 1 parent c9227517

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Showing 31 changed files with 31 additions and 6 deletions
...@@ -4,6 +4,9 @@ from collections import defaultdict as df ...@@ -4,6 +4,9 @@ from collections import defaultdict as df
4 import os 4 import os
5 import random 5 import random
6 from pandas import DataFrame as DF 6 from pandas import DataFrame as DF
7 +#from seaborn import heatmap
8 +import numpy as np
9 +import numpy.random
7 import matplotlib.pyplot as plt 10 import matplotlib.pyplot as plt
8 11
9 # Objective 12 # Objective
...@@ -108,10 +111,26 @@ if __name__ == '__main__': ...@@ -108,10 +111,26 @@ if __name__ == '__main__':
108 fscore[k].append(float(tags[k][2])) 111 fscore[k].append(float(tags[k][2]))
109 #support[k].append(tags[k][3]) 112 #support[k].append(tags[k][3])
110 print(DF(precision)) 113 print(DF(precision))
111 - print(precision) 114 + #================================HEATMAP================================#
115 + '''
116 + plt.clf()
117 + plt.title('Precision score by tag heatmap')
118 + plt.ylabel('runs')
119 + plt.xlabel('tags')
120 + plt.imshow(DF(precision))
121 + plt.show()
122 +
123 +
124 + imageName = str(os.path.join(options.outputPath, options.figureName)) + '_heatmap_' + str(options.version)
125 + fig = plt.figure()
126 + heatmap(DF(precision))
127 + fig.savefig(imageName, bbox_inches='tight', pad_inches = 0.5)
128 + '''
129 + #print(precision)
112 #lines = ['-', '--', '-.', ':', '.', ',', 'o', 'v', '^', '<', '>', '1', '2', '3', '4', 's', 'p', '*', 'h', 'H', '+', 'x', 'D', 'd', '|', '_'] 130 #lines = ['-', '--', '-.', ':', '.', ',', 'o', 'v', '^', '<', '>', '1', '2', '3', '4', 's', 'p', '*', 'h', 'H', '+', 'x', 'D', 'd', '|', '_']
131 + #================================SINGLE PLOT================================
113 lines = ['-','--','-.',':','o','v','^','<','>','s','p','*','H','+','x','D','|'] 132 lines = ['-','--','-.',':','o','v','^','<','>','s','p','*','H','+','x','D','|']
114 - imageName = str(options.figureName) + '_' + str(options.version) 133 + imageName = str(os.path.join(options.outputPath, options.figureName)) + '_' + str(options.version)
115 fig = plt.figure() 134 fig = plt.figure()
116 plt.rcParams.update({'font.size': 15}) 135 plt.rcParams.update({'font.size': 15})
117 fig.set_figheight(13) 136 fig.set_figheight(13)
...@@ -124,13 +143,16 @@ if __name__ == '__main__': ...@@ -124,13 +143,16 @@ if __name__ == '__main__':
124 lines = [ 'r--', 'r-.', 'r:', 'g--', 'g-.', 'g:', 'b--', 'b-.', 'b:' , 'm--', 'm-.', 'm:', 'c--', 'c-.', 'c:'] 143 lines = [ 'r--', 'r-.', 'r:', 'g--', 'g-.', 'g:', 'b--', 'b-.', 'b:' , 'm--', 'm-.', 'm:', 'c--', 'c-.', 'c:']
125 for i,k in enumerate(tags.keys()): 144 for i,k in enumerate(tags.keys()):
126 plt.grid(False) 145 plt.grid(False)
127 - plt.plot(precision[k], lines[i], label=k, linewidth=(15-i)*2) 146 + plt.plot(precision[k], lines[i], label=k, linewidth=4)
147 + for a,b in zip(range(8), precision[k]):
148 + plt.text(a, b+0.03, str(b), fontsize=10)
149 +
128 plt.legend(loc='lower right') 150 plt.legend(loc='lower right')
129 plt.tight_layout() 151 plt.tight_layout()
130 plt.xticks(range(8),['run1', 'run2', 'run3', 'run4', 'run5', 'run6', 'run7', 'run8']) 152 plt.xticks(range(8),['run1', 'run2', 'run3', 'run4', 'run5', 'run6', 'run7', 'run8'])
131 fig.savefig(imageName, bbox_inches='tight', pad_inches = 0.5) 153 fig.savefig(imageName, bbox_inches='tight', pad_inches = 0.5)
132 154
133 - imageName = str(options.figureName) + '_variants_' + str(options.version) 155 + imageName = str(os.path.join(options.outputPath, options.figureName)) + '_variants_' + str(options.version)
134 fig = plt.figure() 156 fig = plt.figure()
135 plt.rcParams.update({'font.size': 15}) 157 plt.rcParams.update({'font.size': 15})
136 fig.set_figheight(13) 158 fig.set_figheight(13)
...@@ -138,11 +160,14 @@ if __name__ == '__main__': ...@@ -138,11 +160,14 @@ if __name__ == '__main__':
138 plt.xlabel("Runs") 160 plt.xlabel("Runs")
139 plt.ylabel("score") 161 plt.ylabel("score")
140 plt.ylim(0.4, 1.2) 162 plt.ylim(0.4, 1.2)
141 - variantTags = [k for k in tags.keys() if len(set(tags[k]))>1 ] 163 + variantTags = [k for k in tags.keys() if len(set(tags[k]))>2 ]
142 #lines = [ 'r^', 'ro', 'g^', 'go', 'b^', 'bo' , 'm^', 'mo', 'c^', 'co', 'ch', 'rh', 'gh', 'bh','mh'] 164 #lines = [ 'r^', 'ro', 'g^', 'go', 'b^', 'bo' , 'm^', 'mo', 'c^', 'co', 'ch', 'rh', 'gh', 'bh','mh']
165 + lines = ['r--', 'g--', 'b--', 'm--', 'c--', 'r-.', 'g-.', 'b-.', 'm-.', 'c-.', 'r:', 'g:', 'b:' , 'm:', 'c:']
143 for i,k in enumerate(variantTags): 166 for i,k in enumerate(variantTags):
144 plt.grid(False) 167 plt.grid(False)
145 - plt.plot(precision[k], lines[i], label=k, linewidth=(15-i)*2) 168 + plt.plot(precision[k], lines[i], label=k, linewidth=4)
169 + for a,b in zip(range(8), precision[k]):
170 + plt.text(a, b+0.03, str(b), fontsize=10)
146 plt.legend(loc='lower right') 171 plt.legend(loc='lower right')
147 plt.tight_layout() 172 plt.tight_layout()
148 plt.xticks(range(8),['run1', 'run2', 'run3', 'run4', 'run5', 'run6', 'run7', 'run8']) 173 plt.xticks(range(8),['run1', 'run2', 'run3', 'run4', 'run5', 'run6', 'run7', 'run8'])
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