Carlos-Francisco Méndez-Cruz / automatic-extraction-growth-conditions

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Estefani Gaytan Nunez
1d5f7e2b 1 parent ee43c206

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1 +{"key1": "keyinfo", "key2": "keyinfo2"}
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1 -------------------------------- PARAMETERS -------------------------------- 1 -------------------------------- PARAMETERS --------------------------------
2 --inputPath Path of training data set : /home/egaytan/automatic-extraction-growth-conditions/predict-annot/input/ 2 --inputPath Path of training data set : /home/egaytan/automatic-extraction-growth-conditions/predict-annot/input/
3 --outputPath Output path to place output files: /home/egaytan/automatic-extraction-growth-conditions/predict-annot/output/ 3 --outputPath Output path to place output files: /home/egaytan/automatic-extraction-growth-conditions/predict-annot/output/
4 ---outputFileI Output tagged file I : annot-input_bg_outputI_v4 4 +--outputFileI Output tagged file I : annot-input_bg_outputI_v5.txt
5 ---outputFileII Output tagged file II : annot-input_bg_outputII_v4 5 +--outputFileII Output tagged file II : annot-input_bg_outputII_v5
6 ---outputFileII Output tagged file III : annot-input_bg_outputIII_v4 6 +--outputFileII Output tagged file III : annot-input_bg_outputIII_v5
7 --modelPath Path to read CRF model : /home/egaytan/automatic-extraction-growth-conditions/CRF/models 7 --modelPath Path to read CRF model : /home/egaytan/automatic-extraction-growth-conditions/CRF/models
8 --modelName Model name : model_Run3_v10_S1_False_S2_True_S3_False_S4_False_Run3_v10 8 --modelName Model name : model_Run3_v10_S1_False_S2_True_S3_False_S4_False_Run3_v10
9 --infoPath Path of GSE-GSM index file : /home/egaytan/automatic-extraction-growth-conditions/predict-annot/mapping 9 --infoPath Path of GSE-GSM index file : /home/egaytan/automatic-extraction-growth-conditions/predict-annot/mapping
10 --infoFile GSE-GSM index file : bg_sentences_midx_v4.txt 10 --infoFile GSE-GSM index file : bg_sentences_midx_v4.txt
11 ---variant Run variant : 13 11 +--variant Run variant : 10
12 ---S1 General features : True 12 +--S1 Inner word features set : False
13 ---S2 Inner/Complete word features : False 13 +--S2 Complete word features : True
14 ---S3 Extended context features : False 14 +--S3 Extended context features : False
15 ---S4 Semantic features : True 15 +--S4 Semantic features : False
16 ---filteringStopWords Filtering stop words : False
17 ---filterSymbols Filtering punctuation marks : False
18 -------------------------------- PROCESSING -------------------------------- 16 -------------------------------- PROCESSING --------------------------------
19 Reading CRF model... 17 Reading CRF model...
20 -Reading CRF model done in: 0.009463s 18 +Reading CRF model done in: 0.009485s
21 Processing corpus... 19 Processing corpus...
22 Preprocessing file...annot-input_bg_v4.txt 20 Preprocessing file...annot-input_bg_v4.txt
23 Sentences input data: 90688 21 Sentences input data: 90688
24 Predicting tags with model... 22 Predicting tags with model...
25 -Prediction done in: 26.367272s 23 +Prediction done in: 27.326342s
26 Tagging file... 24 Tagging file...
25 +
27 Saving Ouput I... 26 Saving Ouput I...
28 Saving Ouput II... 27 Saving Ouput II...
29 Saving Ouput III... 28 Saving Ouput III...
30 -Processing corpus done in: 56.584394s 29 +Processing corpus done in: 247.353067s
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