SRR1927170	GSE67218	GSM1642594	GPL17439	PMID_	RNA-seq 37C LB rep2	Transcriptional expression level of E. coli at 37 ℃ in LB media	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	data_processing	Basecalls performed using CASAVA version 1.4 PGCGROWTHCONDITIONS
SRR1927170	GSE67218	GSM1642594	GPL17439	PMID_	RNA-seq 37C LB rep2	Transcriptional expression level of E. coli at 37 ℃ in LB media	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	data_processing	All sequencing reads were mapped to E. coli MG1655 reference genome (NC_000913) using CLC Genomics Workbench5 with the length fraction of 0.9 and the similarity of 0.99. PGCGROWTHCONDITIONS
SRR1927170	GSE67218	GSM1642594	GPL17439	PMID_	RNA-seq 37C LB rep2	Transcriptional expression level of E. coli at 37 ℃ in LB media	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	data_processing	The expression levels were based upon the RPKM metric obtained from strand-specific manner. PGCGROWTHCONDITIONS
SRR1927170	GSE67218	GSM1642594	GPL17439	PMID_	RNA-seq 37C LB rep2	Transcriptional expression level of E. coli at 37 ℃ in LB media	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	data_processing	Supplementary_files_format_and_content: RPKM is generated by in-house script PGCGROWTHCONDITIONS
SRR1927170	GSE67218	GSM1642594	GPL17439	PMID_	RNA-seq 37C LB rep2	Transcriptional expression level of E. coli at 37 ℃ in LB media	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	extract_protocol	From the cells cultured in LB media at 37 ℃, total RNA was extracted using RNAsnapTM method, followed by the ethanol precipitation. rRNA was removed using ribo-zeroTM magnetic kit for bacteria in accordance with manufacturer’s instruction (Epicentre). rRNA removal was confirmed using ExperionTM system. Subsequently, 4 µg of the purified RNA was fragmented to sizes of ~300 bp using RNA fragmentation reagent (Ambion, Grand Island, NY). PGCGROWTHCONDITIONS
SRR1927170	GSE67218	GSM1642594	GPL17439	PMID_	RNA-seq 37C LB rep2	Transcriptional expression level of E. coli at 37 ℃ in LB media	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	extract_protocol	50 ng of the fragmented RNA was converted to sequencing library using TruSeq® Stranded mRNA Sample Prep Kit in accordance with manufacturer’s instruction (Illumina). PGCGROWTHCONDITIONS
SRR1927170	GSE67218	GSM1642594	GPL17439	PMID_	RNA-seq 37C LB rep2	Transcriptional expression level of E. coli at 37 ℃ in LB media	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	growth_protocol	Glycerol stocks of E. coli K12 strain MG1655 were inoculated into LB media  grown at 37 ℃ with constant agitation overnight. Cultures were diluted 1:100 into fresh minimal medium and then cultured at 37 ℃ to mid-exponential phase (OD600 nm ~ 0.6). PGCGROWTHCONDITIONS
SRR1927170	GSE67218	GSM1642594	GPL17439	PMID_	RNA-seq 37C LB rep2	Transcriptional expression level of E. coli at 37 ℃ in LB media	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	organism	Escherichia coli str. K-12 substr. MG1655 PGCGROWTHCONDITIONS
SRR1927170	GSE67218	GSM1642594	GPL17439	PMID_	RNA-seq 37C LB rep2	Transcriptional expression level of E. coli at 37 ℃ in LB media	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	source_name	Escherichia coli str. K-12 substr. MG1655 PGCGROWTHCONDITIONS
SRR1927170	GSE67218	GSM1642594	GPL17439	PMID_	RNA-seq 37C LB rep2	Transcriptional expression level of E. coli at 37 ℃ in LB media	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	treatment_protocol	No treatment PGCGROWTHCONDITIONS
SRR1927170	GSE67218	GSM1642594	GPL17439	PMID_	RNA-seq 37C LB rep2	Transcriptional expression level of E. coli at 37 ℃ in LB media	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	library_strategy	RNA-Seq PGCGROWTHCONDITIONS
SRR1927170	GSE67218	GSM1642594	GPL17439	PMID_	RNA-seq 37C LB rep2	Transcriptional expression level of E. coli at 37 ℃ in LB media	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	characteristics	cell type: Escherichia coli str. K-12 substr. MG1655 PGCGROWTHCONDITIONS
SRR1927170	GSE67218	GSM1642594	GPL17439	PMID_	RNA-seq 37C LB rep2	Transcriptional expression level of E. coli at 37 ℃ in LB media	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	growth_protocol	Glycerol stocks of E. coli K12 strain MG1655 were inoculated into LB media  grown at 37 ℃ with constant agitation overnight. Cultures were diluted 1:100 into fresh minimal medium and then cultured at 37 ℃ to mid-exponential phase (OD600 nm ~ 0.6). PGCGROWTHCONDITIONS
SRR1927170	GSE67218	GSM1642594	GPL17439	PMID_	RNA-seq 37C LB rep2	Transcriptional expression level of E. coli at 37 ℃ in LB media	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	organism	Escherichia coli str. K-12 substr. MG1655 PGCGROWTHCONDITIONS
SRR1927170	GSE67218	GSM1642594	GPL17439	PMID_	RNA-seq 37C LB rep2	Transcriptional expression level of E. coli at 37 ℃ in LB media	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	source_name	Escherichia coli str. K-12 substr. MG1655 PGCGROWTHCONDITIONS
SRR1927170	GSE67218	GSM1642594	GPL17439	PMID_	RNA-seq 37C LB rep2	Transcriptional expression level of E. coli at 37 ℃ in LB media	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	treatment_protocol	No treatment PGCGROWTHCONDITIONS
SRR1927170	GSE67218	GSM1642594	GPL17439	PMID_	RNA-seq 37C LB rep2	Transcriptional expression level of E. coli at 37 ℃ in LB media	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	contact_name	Byung-Kwan,,Cho PGCGROWTHCONDITIONS