********** TRAINING AND TESTING REPORT **********
Training file: training-data-set-70-NER.txt

best params:{'c1': 0.0002981885742896306, 'c2': 0.021628951543194858}
best CV score:0.8256738268677035
model size: 0.26M

Flat F1: 0.8122021665771957
             precision    recall  f1-score   support

         OD      1.000     1.000     1.000        21
         pH      1.000     1.000     1.000        10
  Technique      1.000     1.000     1.000        33
        Med      1.000     0.804     0.891        56
       Temp      0.857     0.800     0.828        15
       Vess      0.000     0.000     0.000         0
       Agit      0.000     0.000     0.000         7
      Phase      1.000     0.762     0.865        21
        Air      0.900     0.409     0.563        88
       Anti      0.900     0.692     0.783        13
     Strain      0.000     0.000     0.000         0
      Gtype      0.941     0.821     0.877        78
  Substrain      0.000     0.000     0.000         0
       Supp      0.877     0.838     0.857       136
   Gversion      1.000     0.500     0.667         6

avg / total      0.916     0.750     0.812       484


Top likely transitions:
Med    -> Med     5.546959
Supp   -> Supp    5.054652
Temp   -> Temp    5.005078
Anti   -> Anti    4.567440
Gtype  -> Gtype   4.348284
Phase  -> Phase   4.287756
OD     -> OD      3.863598
Air    -> Air     3.862295
Gversion -> Gversion 3.150482
Technique -> Technique 3.142447
O      -> O       3.008214
pH     -> pH      2.722834
Agit   -> Agit    2.044810
Technique -> Air     1.404607
Substrain -> Gtype   1.293348
Gtype  -> Supp    0.655657
Gtype  -> pH      0.453986
Gtype  -> Air     0.261589
O      -> Technique 0.197659
Strain -> O       0.180474
O      -> Vess    0.129302
Vess   -> O       0.095737
O      -> Strain  0.069966
Temp   -> O       0.047370
Phase  -> Air     0.023164
Substrain -> Agit    -0.000001
Strain -> Agit    -0.000005
Med    -> Substrain -0.000022
Temp   -> Strain  -0.000024
Gversion -> Vess    -0.000060
Vess   -> Gversion -0.000084
Vess   -> Technique -0.000354
Vess   -> Phase   -0.001167
Temp   -> Substrain -0.001636
Gversion -> Substrain -0.003936
Agit   -> Strain  -0.004790
Gversion -> Strain  -0.006256
Phase  -> Strain  -0.006273
Substrain -> Phase   -0.006371
Med    -> Strain  -0.006639
pH     -> Substrain -0.007637
Substrain -> Gversion -0.008499
Strain -> Gversion -0.008726
Med    -> Vess    -0.008788
Vess   -> Anti    -0.009903
pH     -> Strain  -0.011907
Technique -> Substrain -0.011936
Temp   -> Vess    -0.012059
Strain -> Temp    -0.012688
pH     -> Vess    -0.012967
Substrain -> Temp    -0.014278
Substrain -> Anti    -0.016919
Vess   -> pH      -0.017458
Phase  -> Vess    -0.017783
Strain -> Technique -0.018182
Substrain -> Strain  -0.020734
OD     -> Vess    -0.020819
Technique -> Vess    -0.021843
Agit   -> Phase   -0.021876
Vess   -> Med     -0.021969
Phase  -> Agit    -0.022676
Anti   -> Vess    -0.024727
Strain -> Air     -0.025207
OD     -> Substrain -0.027386
Strain -> Phase   -0.029354
Vess   -> Air     -0.029694
OD     -> Strain  -0.030345
Anti   -> Substrain -0.031110
Air    -> Vess    -0.031863
Air    -> Strain  -0.034942
Anti   -> Agit    -0.035107
pH     -> Phase   -0.038160
Technique -> Strain  -0.039490
Vess   -> OD      -0.040251
Agit   -> Anti    -0.040628
Strain -> OD      -0.043174
Supp   -> Strain  -0.043909
Temp   -> Agit    -0.044491
Agit   -> Vess    -0.046597
Agit   -> pH      -0.047542
pH     -> Technique -0.050050
Strain -> pH      -0.050839
Med    -> Agit    -0.051087
Vess   -> Temp    -0.051327
Phase  -> Substrain -0.052393
Supp   -> Substrain -0.053377
Med    -> Phase   -0.053911
pH     -> Anti    -0.054207
Anti   -> Strain  -0.054897
Vess   -> Gtype   -0.055552
Air    -> Substrain -0.058204
Agit   -> Gversion -0.058524
Agit   -> Temp    -0.060137
Substrain -> Technique -0.063192
Gversion -> Phase   -0.065905
Substrain -> OD      -0.069262
Substrain -> Air     -0.069566
Temp   -> pH      -0.070868
pH     -> Med     -0.076044
Strain -> Anti    -0.079808
Temp   -> Gversion -0.083606
Agit   -> Med     -0.087476
Anti   -> Gversion -0.089523
OD     -> Phase   -0.089950
Med    -> Gversion -0.090609
Substrain -> pH      -0.091697
pH     -> Agit    -0.092251
Vess   -> Supp    -0.092978
O      -> Substrain -0.095937
Gtype  -> Vess    -0.101811
Anti   -> pH      -0.101814
OD     -> Agit    -0.105042
pH     -> O       -0.105232
OD     -> Anti    -0.105709
Gversion -> Agit    -0.110639
Temp   -> Technique -0.111113
Gtype  -> Strain  -0.114075
Substrain -> Med     -0.114339
Strain -> Supp    -0.114545
Supp   -> Vess    -0.119908
Air    -> pH      -0.123009
pH     -> Gversion -0.133305
Temp   -> Phase   -0.133410
Strain -> Med     -0.137471
Supp   -> Agit    -0.142609
Med    -> pH      -0.145614
Agit   -> Gtype   -0.149927
pH     -> OD      -0.151363
Anti   -> O       -0.151989
Gtype  -> Substrain -0.152906
Temp   -> Anti    -0.154619
Gversion -> Temp    -0.154887
Technique -> Phase   -0.156171
Agit   -> OD      -0.156324
Technique -> Anti    -0.156452
Med    -> Anti    -0.158044
Gversion -> Med     -0.158420
pH     -> Gtype   -0.158535
pH     -> Air     -0.159151
OD     -> pH      -0.160784
OD     -> Gversion -0.173919
Supp   -> Air     -0.177929
Temp   -> OD      -0.179506
Anti   -> Air     -0.187159
Agit   -> Technique -0.189591
Phase  -> pH      -0.196864
Gversion -> pH      -0.199992
Air    -> Anti    -0.206349
Anti   -> OD      -0.212459
Substrain -> Supp    -0.219196
Technique -> Agit    -0.228040
Temp   -> Air     -0.236446
Med    -> Air     -0.238425
Med    -> Temp    -0.243808
Anti   -> Technique -0.247185
Technique -> Temp    -0.251937
pH     -> Temp    -0.253963
Gversion -> Anti    -0.256150
Med    -> Technique -0.259230
Temp   -> Gtype   -0.261784
Supp   -> pH      -0.263890
Gversion -> Technique -0.265977
Agit   -> Supp    -0.270254
Med    -> OD      -0.270506
Technique -> Med     -0.272085
Temp   -> Supp    -0.274266
Med    -> Gtype   -0.279177
Phase  -> Temp    -0.281992
OD     -> Technique -0.323569
Anti   -> Med     -0.332002
Air    -> Med     -0.333339
Gversion -> OD      -0.335835
OD     -> Gtype   -0.340495
Technique -> Gversion -0.352596
Air    -> O       -0.356664
Air    -> Gversion -0.356721
Supp   -> Technique -0.369125
Agit   -> O       -0.376540
Air    -> Technique -0.378637
Gtype  -> Agit    -0.389774
pH     -> Supp    -0.393666
Phase  -> Gtype   -0.394435
Gtype  -> Temp    -0.399499
O      -> Gtype   -0.400658
Gversion -> Gtype   -0.400803
Phase  -> Gversion -0.405422
Med    -> O       -0.405450
O      -> Agit    -0.411830
Air    -> Gtype   -0.437929
Agit   -> Air     -0.451232
O      -> pH      -0.458572
Supp   -> Gversion -0.466960
Strain -> Gtype   -0.483687
Gversion -> Air     -0.491906
Technique -> Supp    -0.493521
Anti   -> Phase   -0.496958
OD     -> Med     -0.497229
Supp   -> Anti    -0.522317
Supp   -> Phase   -0.533870
Anti   -> Supp    -0.538867
OD     -> Supp    -0.549337
Gversion -> Supp    -0.553090
Anti   -> Temp    -0.555896
OD     -> Temp    -0.556706
Technique -> O       -0.564502
Anti   -> Gtype   -0.580592
Supp   -> Temp    -0.589073
O      -> Phase   -0.589636
Gtype  -> Technique -0.601808
Supp   -> O       -0.607864
Gtype  -> OD      -0.626090
OD     -> Air     -0.646522
O      -> Supp    -0.673251
Phase  -> Anti    -0.689970
OD     -> O       -0.691295
Phase  -> Technique -0.694298
Supp   -> OD      -0.696231
Technique -> OD      -0.724729
Supp   -> Gtype   -0.728979
Gtype  -> Med     -0.741086
Gtype  -> Gversion -0.744009
Air    -> Temp    -0.777070
Air    -> OD      -0.810317
Phase  -> Supp    -0.872178
Temp   -> Med     -0.896188
Air    -> Supp    -0.902393
Gtype  -> Phase   -0.945838
Phase  -> OD      -0.990019
Phase  -> Med     -1.059768
Air    -> Phase   -1.105965
Gversion -> O       -1.134400
Gtype  -> Anti    -1.138961
O      -> Temp    -1.144096
Air    -> Agit    -1.153599
O      -> Gversion -1.169653
O      -> Anti    -1.267634
Phase  -> O       -1.282828
Technique -> Gtype   -1.355523
Substrain -> O       -1.376529
O      -> OD      -1.390775
Gtype  -> O       -1.473765
Technique -> pH      -1.503360
Supp   -> Med     -1.659718
O      -> Air     -2.035974
Med    -> Supp    -2.087736
O      -> Med     -2.113445


Top unlikely transitions:
Med    -> Med     5.546959
Supp   -> Supp    5.054652
Temp   -> Temp    5.005078
Anti   -> Anti    4.567440
Gtype  -> Gtype   4.348284
Phase  -> Phase   4.287756
OD     -> OD      3.863598
Air    -> Air     3.862295
Gversion -> Gversion 3.150482
Technique -> Technique 3.142447
O      -> O       3.008214
pH     -> pH      2.722834
Agit   -> Agit    2.044810
Technique -> Air     1.404607
Substrain -> Gtype   1.293348
Gtype  -> Supp    0.655657
Gtype  -> pH      0.453986
Gtype  -> Air     0.261589
O      -> Technique 0.197659
Strain -> O       0.180474
O      -> Vess    0.129302
Vess   -> O       0.095737
O      -> Strain  0.069966
Temp   -> O       0.047370
Phase  -> Air     0.023164
Substrain -> Agit    -0.000001
Strain -> Agit    -0.000005
Med    -> Substrain -0.000022
Temp   -> Strain  -0.000024
Gversion -> Vess    -0.000060
Vess   -> Gversion -0.000084
Vess   -> Technique -0.000354
Vess   -> Phase   -0.001167
Temp   -> Substrain -0.001636
Gversion -> Substrain -0.003936
Agit   -> Strain  -0.004790
Gversion -> Strain  -0.006256
Phase  -> Strain  -0.006273
Substrain -> Phase   -0.006371
Med    -> Strain  -0.006639
pH     -> Substrain -0.007637
Substrain -> Gversion -0.008499
Strain -> Gversion -0.008726
Med    -> Vess    -0.008788
Vess   -> Anti    -0.009903
pH     -> Strain  -0.011907
Technique -> Substrain -0.011936
Temp   -> Vess    -0.012059
Strain -> Temp    -0.012688
pH     -> Vess    -0.012967
Substrain -> Temp    -0.014278
Substrain -> Anti    -0.016919
Vess   -> pH      -0.017458
Phase  -> Vess    -0.017783
Strain -> Technique -0.018182
Substrain -> Strain  -0.020734
OD     -> Vess    -0.020819
Technique -> Vess    -0.021843
Agit   -> Phase   -0.021876
Vess   -> Med     -0.021969
Phase  -> Agit    -0.022676
Anti   -> Vess    -0.024727
Strain -> Air     -0.025207
OD     -> Substrain -0.027386
Strain -> Phase   -0.029354
Vess   -> Air     -0.029694
OD     -> Strain  -0.030345
Anti   -> Substrain -0.031110
Air    -> Vess    -0.031863
Air    -> Strain  -0.034942
Anti   -> Agit    -0.035107
pH     -> Phase   -0.038160
Technique -> Strain  -0.039490
Vess   -> OD      -0.040251
Agit   -> Anti    -0.040628
Strain -> OD      -0.043174
Supp   -> Strain  -0.043909
Temp   -> Agit    -0.044491
Agit   -> Vess    -0.046597
Agit   -> pH      -0.047542
pH     -> Technique -0.050050
Strain -> pH      -0.050839
Med    -> Agit    -0.051087
Vess   -> Temp    -0.051327
Phase  -> Substrain -0.052393
Supp   -> Substrain -0.053377
Med    -> Phase   -0.053911
pH     -> Anti    -0.054207
Anti   -> Strain  -0.054897
Vess   -> Gtype   -0.055552
Air    -> Substrain -0.058204
Agit   -> Gversion -0.058524
Agit   -> Temp    -0.060137
Substrain -> Technique -0.063192
Gversion -> Phase   -0.065905
Substrain -> OD      -0.069262
Substrain -> Air     -0.069566
Temp   -> pH      -0.070868
pH     -> Med     -0.076044
Strain -> Anti    -0.079808
Temp   -> Gversion -0.083606
Agit   -> Med     -0.087476
Anti   -> Gversion -0.089523
OD     -> Phase   -0.089950
Med    -> Gversion -0.090609
Substrain -> pH      -0.091697
pH     -> Agit    -0.092251
Vess   -> Supp    -0.092978
O      -> Substrain -0.095937
Gtype  -> Vess    -0.101811
Anti   -> pH      -0.101814
OD     -> Agit    -0.105042
pH     -> O       -0.105232
OD     -> Anti    -0.105709
Gversion -> Agit    -0.110639
Temp   -> Technique -0.111113
Gtype  -> Strain  -0.114075
Substrain -> Med     -0.114339
Strain -> Supp    -0.114545
Supp   -> Vess    -0.119908
Air    -> pH      -0.123009
pH     -> Gversion -0.133305
Temp   -> Phase   -0.133410
Strain -> Med     -0.137471
Supp   -> Agit    -0.142609
Med    -> pH      -0.145614
Agit   -> Gtype   -0.149927
pH     -> OD      -0.151363
Anti   -> O       -0.151989
Gtype  -> Substrain -0.152906
Temp   -> Anti    -0.154619
Gversion -> Temp    -0.154887
Technique -> Phase   -0.156171
Agit   -> OD      -0.156324
Technique -> Anti    -0.156452
Med    -> Anti    -0.158044
Gversion -> Med     -0.158420
pH     -> Gtype   -0.158535
pH     -> Air     -0.159151
OD     -> pH      -0.160784
OD     -> Gversion -0.173919
Supp   -> Air     -0.177929
Temp   -> OD      -0.179506
Anti   -> Air     -0.187159
Agit   -> Technique -0.189591
Phase  -> pH      -0.196864
Gversion -> pH      -0.199992
Air    -> Anti    -0.206349
Anti   -> OD      -0.212459
Substrain -> Supp    -0.219196
Technique -> Agit    -0.228040
Temp   -> Air     -0.236446
Med    -> Air     -0.238425
Med    -> Temp    -0.243808
Anti   -> Technique -0.247185
Technique -> Temp    -0.251937
pH     -> Temp    -0.253963
Gversion -> Anti    -0.256150
Med    -> Technique -0.259230
Temp   -> Gtype   -0.261784
Supp   -> pH      -0.263890
Gversion -> Technique -0.265977
Agit   -> Supp    -0.270254
Med    -> OD      -0.270506
Technique -> Med     -0.272085
Temp   -> Supp    -0.274266
Med    -> Gtype   -0.279177
Phase  -> Temp    -0.281992
OD     -> Technique -0.323569
Anti   -> Med     -0.332002
Air    -> Med     -0.333339
Gversion -> OD      -0.335835
OD     -> Gtype   -0.340495
Technique -> Gversion -0.352596
Air    -> O       -0.356664
Air    -> Gversion -0.356721
Supp   -> Technique -0.369125
Agit   -> O       -0.376540
Air    -> Technique -0.378637
Gtype  -> Agit    -0.389774
pH     -> Supp    -0.393666
Phase  -> Gtype   -0.394435
Gtype  -> Temp    -0.399499
O      -> Gtype   -0.400658
Gversion -> Gtype   -0.400803
Phase  -> Gversion -0.405422
Med    -> O       -0.405450
O      -> Agit    -0.411830
Air    -> Gtype   -0.437929
Agit   -> Air     -0.451232
O      -> pH      -0.458572
Supp   -> Gversion -0.466960
Strain -> Gtype   -0.483687
Gversion -> Air     -0.491906
Technique -> Supp    -0.493521
Anti   -> Phase   -0.496958
OD     -> Med     -0.497229
Supp   -> Anti    -0.522317
Supp   -> Phase   -0.533870
Anti   -> Supp    -0.538867
OD     -> Supp    -0.549337
Gversion -> Supp    -0.553090
Anti   -> Temp    -0.555896
OD     -> Temp    -0.556706
Technique -> O       -0.564502
Anti   -> Gtype   -0.580592
Supp   -> Temp    -0.589073
O      -> Phase   -0.589636
Gtype  -> Technique -0.601808
Supp   -> O       -0.607864
Gtype  -> OD      -0.626090
OD     -> Air     -0.646522
O      -> Supp    -0.673251
Phase  -> Anti    -0.689970
OD     -> O       -0.691295
Phase  -> Technique -0.694298
Supp   -> OD      -0.696231
Technique -> OD      -0.724729
Supp   -> Gtype   -0.728979
Gtype  -> Med     -0.741086
Gtype  -> Gversion -0.744009
Air    -> Temp    -0.777070
Air    -> OD      -0.810317
Phase  -> Supp    -0.872178
Temp   -> Med     -0.896188
Air    -> Supp    -0.902393
Gtype  -> Phase   -0.945838
Phase  -> OD      -0.990019
Phase  -> Med     -1.059768
Air    -> Phase   -1.105965
Gversion -> O       -1.134400
Gtype  -> Anti    -1.138961
O      -> Temp    -1.144096
Air    -> Agit    -1.153599
O      -> Gversion -1.169653
O      -> Anti    -1.267634
Phase  -> O       -1.282828
Technique -> Gtype   -1.355523
Substrain -> O       -1.376529
O      -> OD      -1.390775
Gtype  -> O       -1.473765
Technique -> pH      -1.503360
Supp   -> Med     -1.659718
O      -> Air     -2.035974
Med    -> Supp    -2.087736
O      -> Med     -2.113445


Top positive:
4.917150 O        b'lemma:_'
4.917150 O        b'word:_'
4.051850 Air      b'lemma:anaerobic'
3.607486 Gtype    b'word:WT'
3.576261 O        b'word:Cra'
3.468397 Technique b'word:ChIP-exo'
3.212965 Supp     b'lemma:Iron'
3.212965 Supp     b'word:Iron'
3.212965 Supp     b'+1:word:Deficient'
3.183658 Technique b'word:ChIPSeq'
3.159116 Air      b'word:Aerobic'
3.142245 Gtype    b'lemma:wt'
3.136619 Phase    b'lemma:stationary'
3.136619 Phase    b'word:stationary'
3.136619 Phase    b'lemma:exponential'
3.136619 Phase    b'word:exponential'
3.028354 Strain   b'lemma:k-12'
3.028354 Strain   b'word:K-12'
3.001708 Air      b'word:Anaerobic'
2.983185 Technique b'word:ChIP-Seq'
2.966476 Technique b'lemma:chipseq'
2.911634 O        b'-1:word:tag'
2.910837 O        b'lemma:Cra'
2.899255 Technique b'lemma:ChIP-exo'
2.886863 Supp     b'lemma:pq'
2.886863 Supp     b'word:PQ'
2.875812 Supp     b'lemma:nh4cl'
2.845753 Supp     b'lemma:2h'
2.845753 Supp     b'-1:lemma:additional'
2.845753 Supp     b'word:2h'
2.845753 Supp     b'-1:word:additional'
2.808072 Phase    b'lemma:mid-log'
2.808072 Phase    b'word:mid-log'
2.803863 O        b'-2:ner:MED'
2.736957 Gversion b'lemma:asm584v2'
2.736957 Gversion b'word:ASM584v2'
2.732863 Gtype    b'word:\xce\x94cra'
2.692253 Air      b'postag:RB'
2.678291 Supp     b'-1:word:Cra'
2.675249 Gtype    b'lemma:\xce\xb4cra'
2.667078 Air      b'word:anaerobic'
2.657100 Med      b'lemma:LB'
2.647224 Med      b'lemma:MOPS'
2.647224 Med      b'word:MOPS'
2.600616 O        b'lemma:.'
2.600616 O        b'postag:.'
2.600616 O        b'word:.'
2.560192 Supp     b'+1:lemma:\xc2\xb5m'
2.560192 Supp     b'+1:word:\xc2\xb5M'
2.548322 Gtype    b'lemma:\xce\xb4fur'
2.548322 Gtype    b'word:\xce\x94fur'
2.539626 Med      b'word:LB'
2.499976 O        b'lemma:at'
2.499422 O        b'-1:lemma:tag'
2.488428 O        b'-1:lemma:glucose'
2.488428 O        b'-1:word:glucose'
2.479689 O        b'lemma:-'
2.479689 O        b'word:-'
2.455127 O        b'postag:VBG'
2.434792 O        b'lemma:1'
2.434792 O        b'word:1'
2.433438 Supp     b'+1:lemma:Deficient'
2.423635 Technique b'lemma:rna-seq'
2.407539 Air      b'postag:JJ'
2.404614 O        b'lemma:b'
2.404614 O        b'word:B'
2.404099 Supp     b'-1:ner:SUPP'
2.393167 Supp     b'lemma:no3'
2.393167 Supp     b'word:NO3'
2.388614 O        b'word:A'
2.364339 Supp     b'-1:lemma:Cra'
2.331572 O        b'+1:lemma:pq'
2.331572 O        b'+1:word:PQ'
2.296815 Air      b'lemma:aerobic'
2.285663 Gtype    b'lemma:wild-type'
2.275489 O        b'lemma:with'
2.275489 O        b'word:with'
2.261655 O        b'-1:lemma:0.3'
2.261655 O        b'-1:word:0.3'
2.241265 Gtype    b'-1:ner:GEN'
2.226459 Air      b'-1:lemma:ChIP-Seq'
2.226459 Air      b'-1:word:ChIP-Seq'
2.219745 O        b'word:Lrp'
2.217423 O        b'lemma:3'
2.217423 O        b'word:3'
2.216523 O        b'lemma:2'
2.216523 O        b'word:2'
2.198684 Air      b'lemma:aerobically'
2.198684 Air      b'word:aerobically'
2.182916 O        b'lemma:purr'
2.182916 O        b'word:PurR'
2.166901 Anti     b'lemma:seqa'
2.166901 Anti     b'word:SeqA'
2.133378 Strain   b'+1:lemma:substr'
2.133378 Strain   b'+1:word:substr'
2.115592 Gtype    b'lemma:type'
2.115592 Gtype    b'word:type'
2.104905 Supp     b'lemma:acetate'
2.104905 Supp     b'word:acetate'
2.099320 O        b'lemma:CEL'
2.099320 O        b'word:CEL'
2.088940 O        b'lemma:rpob'
2.088940 O        b'word:RpoB'
2.088925 O        b'lemma:rep2'
2.088925 O        b'word:rep2'
2.088925 O        b'lemma:rep1'
2.088925 O        b'word:rep1'
2.085859 Med      b'+1:lemma:0.4'
2.085859 Med      b'+1:word:0.4'
2.068122 Substrain b'lemma:mg1655'
2.068122 Substrain b'word:MG1655'
2.053333 Med      b'lemma:media'
2.053333 Med      b'word:media'
2.048842 Temp     b'-1:lemma:37'
2.048842 Temp     b'-1:word:37'
2.040509 Gtype    b'lemma:delta-fnr'
2.040509 Gtype    b'word:delta-fnr'
2.016553 Vess     b'lemma:flask'
2.016553 Vess     b'-1:lemma:warm'
2.016553 Vess     b'word:flask'
2.016553 Vess     b'-1:word:warmed'
2.012224 Med      b'-1:word:ml'
2.009055 Gtype    b'+1:lemma:type'
2.009055 Gtype    b'+1:word:type'
2.005749 Vess     b'-1:postag:VBN'
2.005401 Med      b'-1:lemma:ml'
1.992175 Agit     b'+1:lemma:rpm'
1.992175 Agit     b'+1:word:rpm'
1.991157 Technique b'word:RNA-Seq'
1.987312 Gtype    b'+2:ner:SUPP'
1.985280 O        b'lemma:for'
1.982634 O        b'-1:word:Anaerobic'
1.976754 Gversion b'lemma:chip-seq'
1.974925 O        b'-1:lemma:lb'
1.962964 pH       b'+1:postag:CD'
1.951714 Anti     b'lemma:none'
1.951714 Anti     b'word:none'
1.946520 O        b'postag::'
1.946436 Supp     b'lemma:iptg'
1.946436 Supp     b'word:IPTG'
1.943612 O        b'lemma:trpr'
1.943612 O        b'word:TrpR'
1.938274 O        b'-1:word:Aerobic'
1.931728 Anti     b'lemma:\xcf\x8332'
1.931728 Anti     b'word:\xcf\x8332'
1.926463 O        b'-1:lemma:pq'
1.926463 O        b'-1:word:PQ'
1.898016 O        b'-1:postag:NNS'
1.897781 Gtype    b'-1:postag:VBP'
1.896229 O        b'lemma:ompr'
1.893650 Med      b'postag:NNP'
1.893103 O        b'word:OmpR'
1.890417 Supp     b'-1:lemma:+'
1.890417 Supp     b'-1:word:+'
1.880297 Gtype    b'lemma:wildtype'
1.876450 Gversion b'word:ChIP-Seq'
1.875868 O        b'+1:lemma:od600'
1.875868 O        b'+1:word:OD600'
1.874700 Supp     b'lemma:rifampicin'
1.874700 Supp     b'word:rifampicin'
1.872540 Supp     b'lemma:nacl'
1.872540 Supp     b'word:NaCl'
1.867283 Air      b'lemma:anaeroibc'
1.867283 Air      b'word:Anaeroibc'
1.863856 O        b'postag:VBN'
1.850912 Supp     b'lemma:dpd'
1.850912 Supp     b'word:DPD'
1.845051 Temp     b'lemma:43'
1.845051 Temp     b'word:43'
1.841355 Gversion b'lemma:nc'
1.841355 Gversion b'word:NC'
1.820715 Med      b'lemma:minimal'
1.820715 Med      b'word:minimal'
1.815791 O        b'lemma::'
1.815791 O        b'word::'
1.800334 O        b'word:for'
1.798509 Supp     b'lemma:arginine'
1.796176 Air      b'-1:postag::'
1.792163 Supp     b'+1:lemma:deficient'
1.782247 Gtype    b'+1:lemma:with'
1.782247 Gtype    b'+1:word:with'
1.772104 Gtype    b'lemma:arca8myc'
1.772104 Gtype    b'word:ArcA8myc'
1.771340 O        b'lemma:argr'
1.771340 O        b'word:ArgR'
1.766354 Supp     b'lemma:Fe'
1.766354 Supp     b'word:Fe'
1.764792 Supp     b'+1:lemma:iptg'
1.764792 Supp     b'+1:word:IPTG'
1.760797 O        b'word:C'
1.755737 Gtype    b'lemma:pk4854'
1.755737 Gtype    b'word:PK4854'
1.754173 O        b'lemma:chip-arca'
1.754173 O        b'word:chip-ArcA'
1.747509 Gtype    b'postag:JJ'
1.747058 Technique b'lemma:rnaseq'
1.747058 Technique b'word:RNASeq'
1.744625 Supp     b'+1:word:hours'
1.741795 Med      b'+1:lemma:2.0'
1.741795 Med      b'+1:word:2.0'
1.734535 O        b'lemma:chip-fnr'
1.734535 O        b'word:chip-Fnr'
1.733217 Supp     b'lemma:Adenine'
1.733217 Supp     b'word:Adenine'
1.731621 Agit     b'-1:lemma:250'
1.731621 Agit     b'-1:word:250'
1.728566 OD       b'-1:lemma:od450'
1.728566 OD       b'-1:word:OD450'
1.728421 O        b'+1:word:were'
1.719525 O        b'+1:ner:MED'
1.717823 Gtype    b'+1:lemma:pq'
1.717823 Gtype    b'+1:word:PQ'
1.717146 pH       b'lemma:ph5'
1.717146 pH       b'+1:lemma:.5'
1.717146 pH       b'word:pH5'
1.717146 pH       b'+1:word:.5'
1.709508 O        b'-1:lemma:nh4cl'
1.699810 Air      b'lemma:Anaerobic'
1.698897 Gtype    b'lemma:\xce\xb4oxyr'
1.698897 Gtype    b'word:\xce\x94oxyR'
1.697997 Air      b'-1:lemma:-'
1.697997 Air      b'-1:word:-'
1.692531 Med      b'-1:postag:JJ'
1.678550 Air      b'-1:lemma:co2'
1.678550 Air      b'-1:word:CO2'
1.674442 Supp     b'lemma:glucose'
1.674442 Supp     b'word:glucose'
1.659035 O        b'lemma:\xcf\x8332'
1.659035 O        b'word:\xcf\x8332'
1.639187 Substrain b'lemma:mg1655star'
1.639187 Substrain b'word:MG1655star'
1.638755 O        b'lemma:soxr'
1.638755 O        b'word:SoxR'
1.638755 O        b'lemma:soxs'
1.638755 O        b'word:SoxS'
1.635196 Gtype    b'-1:lemma:\xe2\x88\x86'
1.635196 Gtype    b'-1:word:\xe2\x88\x86'
1.634016 O        b'postag:JJ'
1.633730 O        b'-1:lemma:ChIP-exo'
1.625651 O        b'-1:lemma:acetate'
1.625651 O        b'-1:word:acetate'
1.601671 Temp     b'-1:lemma:43'
1.601671 Temp     b'-1:word:43'
1.598599 Gtype    b'lemma:dfnr'
1.598599 Gtype    b'word:dFNR'
1.598579 Gtype    b'lemma:WT'
1.596627 Supp     b'lemma:Leu'
1.596627 Supp     b'word:Leu'
1.592373 Gtype    b'lemma:\xe2\x88\x86'
1.592373 Gtype    b'word:\xe2\x88\x86'
1.590027 O        b'+1:lemma:250'
1.590027 O        b'+1:word:250'
1.587867 O        b'postag:DT'
1.581901 O        b'+1:word:WT'
1.578894 O        b'-1:lemma:nacl'
1.578894 O        b'-1:word:NaCl'
1.576031 O        b'+1:word:ChIP-Seq'
1.572167 Gtype    b'+1:lemma:ph5'
1.572167 Gtype    b'+1:word:pH5'
1.567446 Agit     b'lemma:rpm'
1.567446 Agit     b'word:rpm'
1.560096 OD       b'lemma:od450'
1.560096 OD       b'word:OD450'
1.560096 OD       b'-1:word:At'
1.555479 Gtype    b'lemma:\xce\xb4ompr'
1.555479 Gtype    b'word:\xce\x94ompR'
1.545419 Supp     b'+1:word:was'
1.544580 Gversion b'lemma:u00096'
1.544580 Gversion b'+1:lemma:.2'
1.544580 Gversion b'word:U00096'
1.544580 Gversion b'+1:word:.2'
1.540566 O        b'+1:lemma:wt'
1.536856 O        b'lemma:2-3'
1.536856 O        b'word:2-3'
1.528616 O        b'lemma:Genome'
1.528616 O        b'word:Genome'
1.528267 Gtype    b'-1:lemma:nsrr'
1.528267 Gtype    b'+1:lemma:flagtag'
1.528267 Gtype    b'-1:word:NsrR'
1.528267 Gtype    b'+1:word:Flagtag'
1.519389 Technique b'+1:lemma:rna-seq'
1.519389 Technique b'+1:word:RNA-seq'
1.517230 O        b'-1:lemma:arginine'
1.506765 Gversion b'-1:lemma:nc'
1.506765 Gversion b'+1:lemma:000913'
1.506765 Gversion b'-1:word:NC'
1.506765 Gversion b'+1:word:000913'
1.501273 Supp     b'postag:NNP'
1.499607 Supp     b'-1:lemma:with'
1.499607 Supp     b'-1:word:with'
1.498919 OD       b'-1:lemma:at'
1.493393 O        b'lemma:chip'
1.490927 Supp     b'-1:lemma:vol'
1.490927 Supp     b'-1:word:vol'
1.486573 Med      b'lemma:m63'
1.486573 Med      b'word:M63'
1.481707 Phase    b'postag:NN'
1.480787 O        b'lemma:affyexp'
1.480787 O        b'word:affyexp'
1.479725 Supp     b'+1:lemma:_'
1.479725 Supp     b'+1:word:_'
1.477984 Temp     b'-1:word:sample'
1.476246 Temp     b'lemma:\xc2\xb0c'
1.476246 Temp     b'word:\xc2\xb0C'
1.473933 Gversion b'lemma:.2'
1.473933 Gversion b'-1:lemma:u00096'
1.473933 Gversion b'word:.2'
1.473933 Gversion b'-1:word:U00096'
1.471067 O        b'lemma:a'
1.467680 O        b'-1:lemma:no3'
1.467680 O        b'-1:word:NO3'
1.461829 O        b'-1:lemma:fructose'
1.461829 O        b'-1:word:fructose'
1.461094 O        b'+1:lemma:k-12'
1.461094 O        b'+1:word:K-12'
1.444494 O        b'+1:lemma:mid-log'
1.444494 O        b'+1:word:mid-log'
1.442579 O        b'+1:lemma:fnr-8myc'
1.442579 O        b'+1:word:Fnr-8myc'
1.438192 Technique b'-1:lemma:chip-exo'
1.437176 Supp     b'+1:lemma:1'
1.437176 Supp     b'+1:word:1'
1.423046 Air      b'+1:lemma:at'
1.423046 Air      b'+1:word:at'
1.410737 Gtype    b'lemma:\xce\xb4soxs'
1.410737 Gtype    b'word:\xce\x94soxS'
1.409258 O        b'-1:lemma:wt'
1.406269 O        b'lemma:gadx'
1.406093 Supp     b'-1:postag:IN'
1.398312 Supp     b'word:Arginine'
1.392747 Med      b'-1:lemma:minimal'
1.392747 Med      b'-1:word:minimal'
1.391028 O        b'isNumber'
1.384883 Med      b'lemma:medium'
1.384883 Med      b'word:medium'
1.381629 Gtype    b'lemma:\xce\xb4soxr'
1.381629 Gtype    b'word:\xce\x94soxR'
1.378663 Temp     b'-1:lemma:\xcf\x8332'
1.378663 Temp     b'-1:word:\xcf\x8332'
1.373641 O        b'word:GadX'
1.372805 Supp     b'+1:lemma:2'
1.372805 Supp     b'+1:word:2'
1.369459 Med      b'-1:lemma:LB'
1.363626 Gtype    b'word:wild-type'
1.363413 Supp     b'word:NH4CL'
1.363169 Substrain b'+1:lemma:phtpg'
1.363169 Substrain b'+1:word:PhtpG'
1.359497 O        b'lemma:Nac'
1.359497 O        b'word:Nac'
1.351897 O        b'lemma:delta'
1.351897 O        b'word:delta'
1.342902 Gtype    b'lemma:deltaseqa'
1.342902 Gtype    b'-1:lemma:old'
1.342902 Gtype    b'word:deltaSeqA'
1.342902 Gtype    b'-1:word:old'
1.338908 O        b'lemma:contain'
1.338908 O        b'word:containing'
1.335946 O        b'lemma:or'
1.335946 O        b'word:or'
1.335190 O        b'lemma:Lrp'
1.328975 O        b'+1:ner:_'
1.323435 Gtype    b'-1:lemma:_'
1.323435 Gtype    b'-1:word:_'
1.322232 Gtype    b'lemma:fur-8myc'
1.322232 Gtype    b'word:fur-8myc'
1.322232 Gtype    b'lemma:cra-8myc-tagged'
1.322232 Gtype    b'word:cra-8myc-tagged'
1.320950 O        b'lemma:oxyr'
1.320950 O        b'word:OxyR'
1.319722 Supp     b'-1:word:OmpR'
1.316287 O        b'lemma:culture'
1.313452 O        b'-1:word:ChIP-exo'
1.313337 O        b'-1:lemma:shake'
1.313337 O        b'-1:word:shaking'
1.309164 O        b'lemma:harbor'
1.309164 O        b'word:harboring'
1.304410 Supp     b'word:NH4Cl'
1.304201 Gversion b'lemma:000913'
1.304201 Gversion b'word:000913'
1.302377 Gtype    b'-1:lemma:phtpg'
1.302377 Gtype    b'-1:word:PhtpG'
1.290894 O        b'lemma:pt7'
1.290894 O        b'word:pT7'
1.288271 O        b'+1:lemma:\xe2\x88\x86'
1.288271 O        b'+1:word:\xe2\x88\x86'
1.278689 O        b'lemma:s'
1.278689 O        b'word:S'
1.274063 O        b'-1:ner:TF'
1.273295 O        b'lemma:ntrc'
1.273295 O        b'word:NtrC'
1.273295 O        b'lemma:csir'
1.273295 O        b'word:CsiR'
1.272025 O        b'+1:postag:RB'
1.268570 Gtype    b'-1:lemma:factor'
1.268570 Gtype    b'-1:word:factor'
1.267164 O        b'+2:ner:KWSUPP'
1.264729 Gtype    b'-1:lemma:from'
1.264729 Gtype    b'-1:word:from'
1.263368 O        b'postag:NNS'
1.262652 O        b'-1:word:fnr'
1.260706 Air      b'+1:lemma:%'
1.260706 Air      b'+1:word:%'
1.259539 Technique b'+1:ner:TF'
1.256812 O        b'lemma:Fur'
1.256812 O        b'word:Fur'
1.251021 O        b'-1:lemma:stpa'
1.251021 O        b'-1:word:stpA'
1.249514 O        b'isLower'
1.249390 Air      b'-1:lemma:%'
1.249390 Air      b'-1:word:%'
1.246399 Gtype    b'lemma:ptac'
1.246399 Gtype    b'word:Ptac'
1.245811 Substrain b'-1:lemma:.'
1.245811 Substrain b'-1:postag:.'
1.245811 Substrain b'-1:word:.'
1.243824 Supp     b'lemma:Trp'
1.243824 Supp     b'word:Trp'
1.243119 O        b'postag:IN'
1.242652 Technique b'+1:lemma:chip-exo'
1.241481 Phase    b'-1:lemma:until'
1.241481 Phase    b'-1:word:until'
1.240727 Supp     b'lemma:fructose'
1.240727 Supp     b'word:fructose'
1.231946 Agit     b'lemma:250'
1.231946 Agit     b'word:250'
1.228305 O        b'word:at'
1.227186 O        b'-1:lemma:into'
1.227186 O        b'-1:word:into'
1.227026 Gtype    b'+1:lemma:_'
1.227026 Gtype    b'+1:word:_'
1.225675 Supp     b'+1:lemma:hour'
1.225629 O        b'-1:lemma:min'
1.225629 O        b'-1:word:min'
1.223614 Technique b'-1:lemma:input'
1.223614 Technique b'-1:word:Input'
1.223216 Phase    b'-1:lemma:mid-log'
1.223216 Phase    b'-1:word:mid-log'
1.222331 Technique b'-1:lemma:rna-seq'
1.222331 Technique b'-1:word:RNA-seq'
1.222017 Temp     b'lemma:37'
1.222017 Temp     b'word:37'
1.217466 Anti     b'lemma:anti-myc'
1.217466 Anti     b'word:anti-myc'
1.210901 Gversion b'lemma:_'
1.210901 Gversion b'word:_'
1.209461 Gtype    b'lemma:fnr8myc'
1.209461 Gtype    b'word:Fnr8myc'
1.206790 O        b'-1:word:Arginine'
1.206332 Temp     b'+1:lemma:\xc2\xb0c'
1.206332 Temp     b'+1:word:\xc2\xb0C'
1.203371 Vess     b'+1:lemma:at'
1.203371 Vess     b'+1:word:at'
1.201052 OD       b'+1:postag:IN'
1.194602 Gtype    b'lemma:delta-arca'
1.194602 Gtype    b'word:delta-arcA'
1.194116 O        b'-1:lemma:media'
1.194116 O        b'-1:word:media'
1.187748 O        b'-1:word:LB'
1.187625 Technique b'lemma:ChIP-Seq'
1.183141 Technique b'-1:lemma:IP'
1.183141 Technique b'-1:word:IP'
1.180195 Gtype    b'-1:lemma:ptac'
1.180195 Gtype    b'-1:word:Ptac'
1.178288 Technique b'postag:NNP'
1.177508 O        b'-1:lemma:anaerobic'
1.167818 OD       b'lemma:0.3'
1.167818 OD       b'word:0.3'
1.165707 Gtype    b'+1:lemma::'
1.165707 Gtype    b'+1:word::'
1.165343 Gtype    b'+1:lemma:control'
1.165343 Gtype    b'+1:word:control'
1.164235 Technique b'-1:lemma:1'
1.164235 Technique b'-1:word:1'
1.164076 O        b'lemma:input'
1.164076 O        b'+1:lemma:chip-seq'
1.164076 O        b'word:Input'
1.163199 Air      b'-1:lemma:phase'
1.163199 Air      b'-1:word:phase'
1.158243 O        b'-1:lemma:type'
1.158243 O        b'-1:word:type'
1.156912 O        b'+1:lemma:43'
1.156912 O        b'+1:word:43'
1.156730 Air      b'-1:lemma:_'
1.156730 Air      b'-1:word:_'
1.153074 O        b'+1:lemma:coli'
1.153074 O        b'+1:word:coli'
1.152170 Gtype    b'-1:postag:VBG'
1.147816 OD       b'-1:postag:IN'
1.141702 Anti     b'-1:lemma::'
1.141702 Anti     b'-1:word::'
1.141052 Supp     b'-1:lemma:ompr'
1.135482 Anti     b'lemma:anti-rpob'
1.135482 Anti     b'word:anti-RpoB'
1.134232 Anti     b'lemma:anti-rpos'
1.134232 Anti     b'word:anti-RpoS'
1.133222 Gtype    b'-1:lemma:rpob'
1.133222 Gtype    b'-1:word:RpoB'
1.129755 Med      b'postag:NNS'
1.122821 Technique b'-1:lemma:_'
1.122821 Technique b'-1:word:_'


Top negative:
-0.096555 O        b'+1:postag:.'
-0.096555 O        b'+1:word:.'
-0.096833 O        b'+1:lemma:gadw'
-0.097236 O        b'+1:word:mutant'
-0.098323 Supp     b'+2:ner:KWSUPP'
-0.098803 O        b'lemma:deletion'
-0.098803 O        b'word:deletion'
-0.100083 O        b'word:Purified'
-0.100083 O        b'-1:word:Affinity'
-0.100513 O        b'+1:word:a'
-0.100775 Substrain b'+2:ner:_'
-0.100838 Gtype    b'+1:ner:TF'
-0.106950 O        b'word:LB'
-0.107644 O        b'-1:lemma:%'
-0.107644 O        b'-1:word:%'
-0.110343 O        b'+1:lemma:95'
-0.110343 O        b'+1:word:95'
-0.111761 Supp     b'lemma:paraquat'
-0.111761 Supp     b'word:paraquat'
-0.112278 O        b'-1:lemma:sodium'
-0.112278 O        b'-1:word:Sodium'
-0.112608 O        b'+1:lemma:25'
-0.112608 O        b'+1:word:25'
-0.115056 O        b'-1:lemma:affinity'
-0.118178 Supp     b'lemma:.'
-0.118178 Supp     b'postag:.'
-0.118178 Supp     b'word:.'
-0.118360 Air      b'+1:postag:NN'
-0.118481 Air      b'postag:CD'
-0.118986 O        b'-1:lemma:deletion'
-0.118986 O        b'-1:word:deletion'
-0.119076 Phase    b'isGreek'
-0.119409 O        b'isGreek'
-0.120853 O        b'-1:lemma:od600'
-0.120853 O        b'-1:word:OD600'
-0.121286 O        b'lemma:hour'
-0.121388 Supp     b'-1:word:the'
-0.124406 OD       b'isLower'
-0.126393 O        b'-1:word:Purified'
-0.126701 O        b'-1:lemma:\xe2\x88\x86'
-0.126701 O        b'-1:word:\xe2\x88\x86'
-0.127238 Supp     b'lemma:and'
-0.127238 Supp     b'word:and'
-0.129229 O        b'lemma:8'
-0.129229 O        b'word:8'
-0.132144 O        b'-1:lemma:the'
-0.132514 O        b'lemma:n2'
-0.132514 O        b'word:N2'
-0.133249 O        b'+1:lemma:='
-0.133249 O        b'+1:word:='
-0.135278 Supp     b'-1:lemma:the'
-0.137281 Gtype    b'+1:lemma:-rrb-'
-0.137281 Gtype    b'+1:word:-RRB-'
-0.137979 Gtype    b'-1:lemma:-lrb-'
-0.137979 Gtype    b'-1:word:-LRB-'
-0.139108 O        b'+1:lemma:gade'
-0.140035 Substrain b'+1:ner:_'
-0.142311 Supp     b'lemma:,'
-0.142311 Supp     b'postag:,'
-0.142311 Supp     b'word:,'
-0.143560 Supp     b'+1:ner:SUPP'
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