"strain: MC4100 derivative"	"characteristics_ch1.1"
"strain: MC4100 derivative, recA730"	"characteristics_ch2.1"
"GPR files were analyzed further with Acuity 4.0 software (Molecular Devices, USA) starting with lowess normalization. Normalized log2 ratio data from biological replicates and technical replicates (dye swap) were averaged and the statistical significance (p-value) was calculated."	"data_processing.1"
"RNA was isolated using the RNeasy Protect Bacteria Mini Kit (Qiagen), following manufacturer's instructions."	"extract_protocol_ch1.1"
"RNA was isolated using the RNeasy Protect Bacteria Mini Kit (Qiagen), following manufacturer's instructions."	"extract_protocol_ch2.1"
"Bacterial strains were grown in LB. Overnight cultures were diluted 1:100 in fresh LB and grown at 37°C with shaking to an OD600 = 0.5."	"growth_protocol_ch1.1"
"Bacterial strains were grown in LB. Overnight cultures were diluted 1:100 in fresh LB and grown at 37°C with shaking to an OD600 = 0.5."	"growth_protocol_ch2.1"
"Escherichia coli"	"organism_ch1.1"
"Escherichia coli"	"organism_ch2.1"
"bacterial cells grown to OD600=0.5"	"source_name_ch1.1"
"bacterial cells grown to OD600=0.5"	"source_name_ch2.1"
"WT_vs_recA730"	"title.1"
"N/A"	"treatment_protocol_ch1.1"
"N/A"	"treatment_protocol_ch2.1"
"strain: MC4100 derivative"	"characteristics_ch1.1"
"strain: MC4100 derivative, recA730"	"characteristics_ch2.1"
"Bacterial strains were grown in LB. Overnight cultures were diluted 1:100 in fresh LB and grown at 37°C with shaking to an OD600 = 0.5."	"growth_protocol_ch1.1"
"Bacterial strains were grown in LB. Overnight cultures were diluted 1:100 in fresh LB and grown at 37°C with shaking to an OD600 = 0.5."	"growth_protocol_ch2.1"
"Escherichia coli"	"organism_ch1.1"
"Escherichia coli"	"organism_ch2.1"
"bacterial cells grown to OD600=0.5"	"source_name_ch1.1"
"bacterial cells grown to OD600=0.5"	"source_name_ch2.1"
"N/A"	"treatment_protocol_ch1.1"
"N/A"	"treatment_protocol_ch2.1"