GSE38186-GSM936396-GPL13360-PMID:.tsv 3.34 KB
"strain: K-12 W3110"	"characteristics_ch1.1"
"treatment: 10% H202"	"characteristics_ch1.2"
"genotype: wild type"	"characteristics_ch1.3"
"strain: K-12 W3110"	"characteristics_ch2.1"
"treatment: 10% H202"	"characteristics_ch2.2"
"genotype: luxS"	"characteristics_ch2.3"
"Agilent Feature Extraction Software v. 9.5.3.1  was used for background subtraction and LOWESS normalization."	"data_processing.1"
"Total RNA was extracted from 5ml cell culture after 30min incubation with or without H2O2 treatment using RNeasy Mini kit (Qiagen, Inc., Valencia, CA) according to the manufacturer’s protocol"	"extract_protocol_ch1.1"
"Total RNA was extracted from 5ml cell culture after 30min incubation with or without H2O2 treatment using RNeasy Mini kit (Qiagen, Inc., Valencia, CA) according to the manufacturer’s protocol"	"extract_protocol_ch2.1"
"Overnight culture of E. coli in LB was diluted in LB supplemented with 0.8% glucose to OD600=0.02 and was continuously incubated at 30 degree celcius with shaking until its OD600 reached 1.0"	"growth_protocol_ch1.1"
"Overnight culture of E. coli in LB was diluted in LB supplemented with 0.8% glucose to OD600=0.02 and was continuously incubated at 30 degree celcius with shaking until its OD600 reached 1.0"	"growth_protocol_ch2.1"
"Escherichia coli"	"organism_ch1.1"
"Escherichia coli"	"organism_ch2.1"
"wild type, 10% H2O2"	"source_name_ch1.1"
"luxS mutants, 10% H2O2"	"source_name_ch2.1"
"Escherichia coli wild type vs luxS mutants with 10% H2O2 Rep2"	"title.1"
"three different concentrations, without H2O2, 10% (v/v) or 30% H2O2 were added directly to the cell cultures of wild type or luxS mutants, OD of which is 1.0. Treated samples were continuously incubated at 30 degree Celcius for 30min"	"treatment_protocol_ch1.1"
"three different concentrations, without H2O2, 10% (v/v) or 30% H2O2 were added directly to the cell cultures of wild type or luxS mutants, OD of which is 1.0. Treated samples were continuously incubated at 30 degree Celcius for 30min"	"treatment_protocol_ch2.1"
"strain: K-12 W3110"	"characteristics_ch1.1"
"treatment: 10% H202"	"characteristics_ch1.2"
"genotype: wild type"	"characteristics_ch1.3"
"strain: K-12 W3110"	"characteristics_ch2.1"
"treatment: 10% H202"	"characteristics_ch2.2"
"genotype: luxS"	"characteristics_ch2.3"
"Overnight culture of E. coli in LB was diluted in LB supplemented with 0.8% glucose to OD600=0.02 and was continuously incubated at 30 degree celcius with shaking until its OD600 reached 1.0"	"growth_protocol_ch1.1"
"Overnight culture of E. coli in LB was diluted in LB supplemented with 0.8% glucose to OD600=0.02 and was continuously incubated at 30 degree celcius with shaking until its OD600 reached 1.0"	"growth_protocol_ch2.1"
"Escherichia coli"	"organism_ch1.1"
"Escherichia coli"	"organism_ch2.1"
"wild type, 10% H2O2"	"source_name_ch1.1"
"luxS mutants, 10% H2O2"	"source_name_ch2.1"
"three different concentrations, without H2O2, 10% (v/v) or 30% H2O2 were added directly to the cell cultures of wild type or luxS mutants, OD of which is 1.0. Treated samples were continuously incubated at 30 degree Celcius for 30min"	"treatment_protocol_ch1.1"
"three different concentrations, without H2O2, 10% (v/v) or 30% H2O2 were added directly to the cell cultures of wild type or luxS mutants, OD of which is 1.0. Treated samples were continuously incubated at 30 degree Celcius for 30min"	"treatment_protocol_ch2.1"