GSE23578-GSM578401-GPL5113-PMID:.tsv 1.83 KB
"strain: BW25113"	"characteristics_ch1.1"
"strain: BW25113"	"characteristics_ch2.1"
"Quantification of the scans were performed with ImaGene (Version 6.0.1; BioDiscovery; El Segundo, CA; www.biodiscovery.com); with the results presented in the associated text files. The normalized data VALUE was generated using LOWESS normalization with rank invariant selection, as implemented in lcDNA (receptor.seas.ucla.edu/lcDNA; Hyduke DR, Rohlin L, Kao KC, Liao JC. 2003 A software package for cDNA microarray data normalization and assessing confidence intervals. OMICS 7(3):227-234.)"	"data_processing.1"
"RNA extracted by hot phenol choloroform folled by Qiagen RNA Midi column."	"extract_protocol_ch1.1"
"RNA extracted by hot phenol choloroform folled by Qiagen RNA Midi column."	"extract_protocol_ch2.1"
"Cells aerobically grown to mid-log phase in MOPS/0.5% glucose at 37C and ~250 RPM."	"growth_protocol_ch1.1"
"Cells aerobically grown to mid-log phase in MOPS/0.5% glucose at 37C and ~250 RPM."	"growth_protocol_ch2.1"
"Escherichia coli"	"organism_ch1.1"
"Escherichia coli"	"organism_ch2.1"
"Control"	"source_name_ch1.1"
"KCN"	"source_name_ch2.1"
"Ecoli_WT_100uM_KCN_Sample1_TechRep2"	"title.1"
"Untreated"	"treatment_protocol_ch1.1"
"Treated with 100 uM KCN for 5 minutes before harvesting"	"treatment_protocol_ch2.1"
"strain: BW25113"	"characteristics_ch1.1"
"strain: BW25113"	"characteristics_ch2.1"
"Cells aerobically grown to mid-log phase in MOPS/0.5% glucose at 37C and ~250 RPM."	"growth_protocol_ch1.1"
"Cells aerobically grown to mid-log phase in MOPS/0.5% glucose at 37C and ~250 RPM."	"growth_protocol_ch2.1"
"Escherichia coli"	"organism_ch1.1"
"Escherichia coli"	"organism_ch2.1"
"Control"	"source_name_ch1.1"
"KCN"	"source_name_ch2.1"
"Untreated"	"treatment_protocol_ch1.1"
"Treated with 100 uM KCN for 5 minutes before harvesting"	"treatment_protocol_ch2.1"