Carlos-Francisco Méndez-Cruz / automatic-extraction-growth-conditions

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GSE10319-GSM260722-GPL3051-PMID:19635828.tsv 2.98 KB
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"strain: O157:H7 EHEC TUV93-0"	"characteristics_ch1.1"
"od: 0.7"	"characteristics_ch1.2"
"media: MEM-HEPES supplemented with 0.1% Glucose and 250nM Fe(NO3)2"	"characteristics_ch1.3"
"inhibitor: 20uM ME0054"	"characteristics_ch1.4"
"strain: O157:H7 EHEC TUV93-0"	"characteristics_ch2.1"
"od: 0.7"	"characteristics_ch2.2"
"media: MEM-HEPES supplemented with 0.1% Glucose and 250nM Fe(NO3)2"	"characteristics_ch2.3"
"no inhibitor: equivalent volume of DMSO added"	"characteristics_ch2.4"
"LOWESS normalised data that represents the average of the three replicate experiments"	"data_processing.1"
"An RNeasy minikit was used to prepare total RNA according to the manufacturer’s instructions (QIAGEN Ltd.). Any contaminating DNA was removed using a DNAase column kit (QIAGEN Ltd)."	"extract_protocol_ch1.1"
"An RNeasy minikit was used to prepare total RNA according to the manufacturer’s instructions (QIAGEN Ltd.). Any contaminating DNA was removed using a DNAase column kit (QIAGEN Ltd)."	"extract_protocol_ch2.1"
"Escherichia coli O157 TUV93-0 was grown at 37 degrees C to OD 0.7 in MEM-HEPES supplemented with 0.1% Glucose and 250nM Fe(NO3)2."	"growth_protocol_ch1.1"
"Escherichia coli O157 TUV93-0 was grown at 37 degrees C to OD 0.7 in MEM-HEPES supplemented with 0.1% Glucose and 250nM Fe(NO3)2 and and equivalent volume of DMSO."	"growth_protocol_ch2.1"
"Escherichia coli"	"organism_ch1.1"
"Escherichia coli"	"organism_ch2.1"
"Escherichia coli O157 TUV93-0 MEM-HEPES + 20uM ME0054 (in DMSO)"	"source_name_ch1.1"
"Escherichia coli O157 TUV93-0 MEM-HEPES + DMSO"	"source_name_ch2.1"
"ME0054"	"title.1"
"Escherichia coli O157 TUV93-0 was grown in the presence of 20uM ME0054"	"treatment_protocol_ch1.1"
"Escherichia coli O157 TUV93-0 was grown in the presence of DMSO"	"treatment_protocol_ch2.1"
"strain: O157:H7 EHEC TUV93-0"	"characteristics_ch1.1"
"od: 0.7"	"characteristics_ch1.2"
"media: MEM-HEPES supplemented with 0.1% Glucose and 250nM Fe(NO3)2"	"characteristics_ch1.3"
"inhibitor: 20uM ME0054"	"characteristics_ch1.4"
"strain: O157:H7 EHEC TUV93-0"	"characteristics_ch2.1"
"od: 0.7"	"characteristics_ch2.2"
"media: MEM-HEPES supplemented with 0.1% Glucose and 250nM Fe(NO3)2"	"characteristics_ch2.3"
"no inhibitor: equivalent volume of DMSO added"	"characteristics_ch2.4"
"Escherichia coli O157 TUV93-0 was grown at 37 degrees C to OD 0.7 in MEM-HEPES supplemented with 0.1% Glucose and 250nM Fe(NO3)2."	"growth_protocol_ch1.1"
"Escherichia coli O157 TUV93-0 was grown at 37 degrees C to OD 0.7 in MEM-HEPES supplemented with 0.1% Glucose and 250nM Fe(NO3)2 and and equivalent volume of DMSO."	"growth_protocol_ch2.1"
"Escherichia coli"	"organism_ch1.1"
"Escherichia coli"	"organism_ch2.1"
"Escherichia coli O157 TUV93-0 MEM-HEPES + 20uM ME0054 (in DMSO)"	"source_name_ch1.1"
"Escherichia coli O157 TUV93-0 MEM-HEPES + DMSO"	"source_name_ch2.1"
"Escherichia coli O157 TUV93-0 was grown in the presence of 20uM ME0054"	"treatment_protocol_ch1.1"
"Escherichia coli O157 TUV93-0 was grown in the presence of DMSO"	"treatment_protocol_ch2.1"