GSE94342-GSM2473477-GPL13360-PMID:28952540.tsv 2.21 KB
"protocol: M9 supplemented with 0.6 M NaCl"	"characteristics_ch1.1"
"genotype: rpoC K370_A396dup mutant"	"characteristics_ch1.2"
"strain: MG1655"	"characteristics_ch1.3"
"protocol: M9 supplemented with 0.6 M NaCl"	"characteristics_ch2.1"
"genotype: Wild-type strain"	"characteristics_ch2.2"
"strain: MG1655"	"characteristics_ch2.3"
"Data were normalized using the LOWESS algorithm and analyzed for statistical significance using the MeV package"	"data_processing.1"
"Samples were grown to mid exponential phase (OD approx 0.5). Cultures were then quickly chilled to ≤ 4 ºC on dry ice/isopropanol bath, harvested by centrifugation (4470 × g) at 4 ºC and resuspended in RNALater to stop RNA degradation. The Zymo Quick-RNA miniprep kit was used to extract pure RNA for subsequent analysis"	"extract_protocol_ch1.1"
"Samples were grown to mid exponential phase (OD approx 0.5). Cultures were then quickly chilled to ≤ 4 ºC on dry ice/isopropanol bath, harvested by centrifugation (4470 × g) at 4 ºC and resuspended in RNALater to stop RNA degradation. The Zymo Quick-RNA miniprep kit was used to extract pure RNA for subsequent analysis"	"extract_protocol_ch2.1"
"Grown in glucose M9 media with or without supplementation of 0.6 M NaCl"	"growth_protocol_ch1.1"
"Grown in glucose M9 media with or without supplementation of 0.6 M NaCl"	"growth_protocol_ch2.1"
"Escherichia coli"	"organism_ch1.1"
"Escherichia coli"	"organism_ch2.1"
"EYG1, MG1655 rpoC K370_A396dup"	"source_name_ch1.1"
"MG1655"	"source_name_ch2.1"
"EYG in M9 supplemented with 0.6 M NaCl Replicate 1"	"title.1"
"protocol: M9 supplemented with 0.6 M NaCl"	"characteristics_ch1.1"
"genotype: rpoC K370_A396dup mutant"	"characteristics_ch1.2"
"strain: MG1655"	"characteristics_ch1.3"
"protocol: M9 supplemented with 0.6 M NaCl"	"characteristics_ch2.1"
"genotype: Wild-type strain"	"characteristics_ch2.2"
"strain: MG1655"	"characteristics_ch2.3"
"Grown in glucose M9 media with or without supplementation of 0.6 M NaCl"	"growth_protocol_ch1.1"
"Grown in glucose M9 media with or without supplementation of 0.6 M NaCl"	"growth_protocol_ch2.1"
"Escherichia coli"	"organism_ch1.1"
"Escherichia coli"	"organism_ch2.1"
"EYG1, MG1655 rpoC K370_A396dup"	"source_name_ch1.1"
"MG1655"	"source_name_ch2.1"