"phase: early stationary phase"	"characteristics_ch1.1"
"strain: BW25113"	"characteristics_ch1.2"
"phase: early stationary phase"	"characteristics_ch2.1"
"strain: BW25113"	"characteristics_ch2.2"
"Agilent Feature Extract software performed background normalization and LOWESS correction for dye bias. Non-E. coli K-12 probes were removed from the dataset, as the BW25113 strain is a K-12 strain."	"data_processing.1"
"Total RNA was isolated with the MasterPure RNA Isolation Kit (Epicentre), enriched for mRNA using the mRNA Prokaryotic mRNA Isolation Kit (Epicentre), and polyadenylated with kit all based on the manufacturer's instructions"	"extract_protocol_ch1.1"
"Total RNA was isolated with the MasterPure RNA Isolation Kit (Epicentre), enriched for mRNA using the mRNA Prokaryotic mRNA Isolation Kit (Epicentre), and polyadenylated with kit all based on the manufacturer's instructions"	"extract_protocol_ch2.1"
"Escherichia coli cells were grown in LB at 37oC with shaking at 250 RPM"	"growth_protocol_ch1.1"
"Escherichia coli cells were grown in LB at 37oC with shaking at 250 RPM"	"growth_protocol_ch2.1"
"Escherichia coli"	"organism_ch1.1"
"Escherichia coli"	"organism_ch2.1"
"untreated"	"source_name_ch1.1"
"5-azacytidine-treated"	"source_name_ch2.1"
"early stationary phase 2"	"title.1"
"Cells were grown in the absence and presence of 0.005 mg/mL 5-azacytidine to logarithmic phase (2 hours, A600=~0.45) or early stationary phase (8 hours, A600=~2.7)"	"treatment_protocol_ch1.1"
"Cells were grown in the absence and presence of 0.005 mg/mL 5-azacytidine to logarithmic phase (2 hours, A600=~0.45) or early stationary phase (8 hours, A600=~2.7)"	"treatment_protocol_ch2.1"
"phase: early stationary phase"	"characteristics_ch1.1"
"strain: BW25113"	"characteristics_ch1.2"
"phase: early stationary phase"	"characteristics_ch2.1"
"strain: BW25113"	"characteristics_ch2.2"
"Escherichia coli cells were grown in LB at 37oC with shaking at 250 RPM"	"growth_protocol_ch1.1"
"Escherichia coli cells were grown in LB at 37oC with shaking at 250 RPM"	"growth_protocol_ch2.1"
"Escherichia coli"	"organism_ch1.1"
"Escherichia coli"	"organism_ch2.1"
"untreated"	"source_name_ch1.1"
"5-azacytidine-treated"	"source_name_ch2.1"
"Cells were grown in the absence and presence of 0.005 mg/mL 5-azacytidine to logarithmic phase (2 hours, A600=~0.45) or early stationary phase (8 hours, A600=~2.7)"	"treatment_protocol_ch1.1"
"Cells were grown in the absence and presence of 0.005 mg/mL 5-azacytidine to logarithmic phase (2 hours, A600=~0.45) or early stationary phase (8 hours, A600=~2.7)"	"treatment_protocol_ch2.1"