GSE73640-GSM1899948-GPL20978-PMID:27681369.tsv
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"strain: K12 MG1655" "characteristics_ch1.1"
"stress: heptanoic acid" "characteristics_ch1.2"
"metabolic response: K12 MG1655 activates various acid resistance systems under heptanoic acid stress" "characteristics_ch1.3"
"The average fluorescence intensity for each spot was calculated and local background was subtracted. All data normalization and selection of fold-changed genes were performed using GeneSpringGX 7.3.1 (Agilent Technology, USA). Normalization for Agilent one-color method was performed, which is Data transformation : Set measurements less than 5.0 to 5.0 and Per Chip :Normalize to 50th percentage." "data_processing.1"
"Total RNA was extracted using TRIzol (Invitrogen)" "extract_protocol_ch1.1"
"When E. coli cells were cultivated to the exponential growth phase (OD600 = 0.5) in Riesenberg medium, 3 or 10 mM heptanoic acid was treated to BL21(DE3) and K-12 MG1655, respectively. After 3 h incubation, the E. coli cells were harvested for transcriptome analysis" "growth_protocol_ch1.1"
"Escherichia coli str. K-12 substr. MG1655" "organism_ch1.1"
"K12 MG1655 with 10 mM of heptanoic acid" "source_name_ch1.1"
"MG1655 HPA 10mM" "title.1"
"strain: K12 MG1655" "characteristics_ch1.1"
"stress: heptanoic acid" "characteristics_ch1.2"
"metabolic response: K12 MG1655 activates various acid resistance systems under heptanoic acid stress" "characteristics_ch1.3"
"When E. coli cells were cultivated to the exponential growth phase (OD600 = 0.5) in Riesenberg medium, 3 or 10 mM heptanoic acid was treated to BL21(DE3) and K-12 MG1655, respectively. After 3 h incubation, the E. coli cells were harvested for transcriptome analysis" "growth_protocol_ch1.1"
"Escherichia coli str. K-12 substr. MG1655" "organism_ch1.1"
"K12 MG1655 with 10 mM of heptanoic acid" "source_name_ch1.1"