"strain information: E. coli harboring empty vector (pRADgro), used as a control strain"	"characteristics_ch1.1"
"strain information: E. coli harboring pRADgro::dr1558"	"characteristics_ch2.1"
"The genes were filtered by removing the flag-out genes in each experiment. The gene expression was normalized through LOWESS regression for 3 datasets obtained from 3 biological replicates."	"data_processing.1"
"The genes were considered differentially expressed when the logarithmic gene expression ratios had a 2-fold difference in the expression level. The significance of the data was determined using Student’s t test. P-values of less than 0.01 were considered significant."	"data_processing.2"
"Total RNA extracted using RiboEX reagent (GeneAll, Korea), treated with Dnase, and purified using the Rneasy Mini kit (Qiagen, Germany) according to the manufacturer's instructions."	"extract_protocol_ch1.1"
"Total RNA extracted using RiboEX reagent (GeneAll, Korea), treated with Dnase, and purified using the Rneasy Mini kit (Qiagen, Germany) according to the manufacturer's instructions."	"extract_protocol_ch2.1"
"Cells grown aerobically to exponential phase (OD600 = 0.8) in LB media at 37C were harvested."	"growth_protocol_ch1.1"
"Cells grown aerobically to exponential phase (OD600 = 0.8) in LB media at 37C were harvested."	"growth_protocol_ch2.1"
"Escherichia coli"	"organism_ch1.1"
"Escherichia coli"	"organism_ch2.1"
"E. coli harboring pRadGro replicate 2"	"source_name_ch1.1"
"E. coli expressing dr1558 replicate 2"	"source_name_ch2.1"
"Ec-pR VS Ec-1558 rep2"	"title.1"
"Non-treatment"	"treatment_protocol_ch1.1"
"Non-treatment"	"treatment_protocol_ch2.1"
"strain information: E. coli harboring empty vector (pRADgro), used as a control strain"	"characteristics_ch1.1"
"strain information: E. coli harboring pRADgro::dr1558"	"characteristics_ch2.1"
"Cells grown aerobically to exponential phase (OD600 = 0.8) in LB media at 37C were harvested."	"growth_protocol_ch1.1"
"Cells grown aerobically to exponential phase (OD600 = 0.8) in LB media at 37C were harvested."	"growth_protocol_ch2.1"
"Escherichia coli"	"organism_ch1.1"
"Escherichia coli"	"organism_ch2.1"
"E. coli harboring pRadGro replicate 2"	"source_name_ch1.1"
"E. coli expressing dr1558 replicate 2"	"source_name_ch2.1"
"Non-treatment"	"treatment_protocol_ch1.1"
"Non-treatment"	"treatment_protocol_ch2.1"