GSE37095-GSM910631-GPL3154-PMID:.tsv
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"growth protocol: control" "characteristics_ch1.1"
"Data were processed using the robust multiarray average algorithm (RMA) for normalization, background correction and expression value calculation. The EB (Wright and Simon) test was used for the fold change and the pvalue calculation," "data_processing.1"
"RNA extractions were performed using RiboPure™Bacteria Kit (Ambion, Austin, TX), according to the manufacturer's recommendations" "extract_protocol_ch1.1"
"E. coli O157:H7 was grown in 15mL falcon tubes containing 8mL of filtered rat's caecal content. Growth were performed in static condition at 37 °C for 6 hours." "growth_protocol_ch1.1"
"Escherichia coli O157:H7 str. EDL933" "organism_ch1.1"
"Escherichia coli O157:H7 cultivated for 6 hours in the caecal content of rats" "source_name_ch1.1"
"Germfree rat's caecum, biological rep2" "title.1"
"Bacterial pellets were resuspended in 350µl RNAwiz (Ambion, Austin, TX) and kept at -80 °C." "treatment_protocol_ch1.1"
"growth protocol: control" "characteristics_ch1.1"
"E. coli O157:H7 was grown in 15mL falcon tubes containing 8mL of filtered rat's caecal content. Growth were performed in static condition at 37 °C for 6 hours." "growth_protocol_ch1.1"
"Escherichia coli O157:H7 str. EDL933" "organism_ch1.1"
"Escherichia coli O157:H7 cultivated for 6 hours in the caecal content of rats" "source_name_ch1.1"
"Bacterial pellets were resuspended in 350µl RNAwiz (Ambion, Austin, TX) and kept at -80 °C." "treatment_protocol_ch1.1"