"strain: K-12 MG1655"	"characteristics_ch1.1"
"The data were analyzed with ArrayStar 3 (DNASTAR) using RMA normalization method. Genes with at least two-fold expression level change and FDR-adjusted P-value (T-test) of less than 0.05 were considered significant."	"data_processing.1"
"total RNA was extreacted using Quagen RNA mini kit. DNA was removed by DNase digestion. RNA quality and concentration was determined by analysis with an Thermo NanoDrop 1000."	"extract_protocol_ch1.1"
"Wild type and the mutant were grown on minimal M9 media with 4 g/L glucose as a sole carbon source at 37C with aeration (+O2) or nitrogen sparging (-O2)"	"growth_protocol_ch1.1"
"Escherichia coli str. K-12 substr. MG1655"	"organism_ch1.1"
"E. coli MG1655, M9 media with 4 g/L glucose, anaerobic, log phase"	"source_name_ch1.1"
"WT -O2 3"	"title.1"
"No specific treatment was done. Samples were collected in the mid-log growth phase for expression analysis"	"treatment_protocol_ch1.1"
"strain: K-12 MG1655"	"characteristics_ch1.1"
"Wild type and the mutant were grown on minimal M9 media with 4 g/L glucose as a sole carbon source at 37C with aeration (+O2) or nitrogen sparging (-O2)"	"growth_protocol_ch1.1"
"Escherichia coli str. K-12 substr. MG1655"	"organism_ch1.1"
"E. coli MG1655, M9 media with 4 g/L glucose, anaerobic, log phase"	"source_name_ch1.1"
"No specific treatment was done. Samples were collected in the mid-log growth phase for expression analysis"	"treatment_protocol_ch1.1"