GSE17441-GSM435073-GPL5482-PMID:20410062.tsv
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"strain: E. coli imp 4231(G93V)" "characteristics_ch1.1"
"passage: 4" "characteristics_ch1.2"
"imp mutation: contains a 23 codon deletion allele in imp (increased membrane permeability),substitution of the 93th codon of fabI, NTG treatment; fabI(G93V), substitution of Gly(the 93th codon) of fabI with Val, NTG treatment to be high resistance to triclosan" "characteristics_ch1.3"
"ntg treatment: yes" "characteristics_ch1.4"
"agent: no triclosan" "characteristics_ch1.5"
"strain: E. coli imp 4231(G93V), substitution of the 93th codon of fabI" "characteristics_ch2.1"
"imp mutation: contains a 23 codon detion allele in imp (increased membrane permeability),substitution of the 93th codon of fabI; fabI(G93V), substitution of Gly(the 93th codon) of fabI with Val" "characteristics_ch2.2"
"LOWESS normalized, background subtracted data obtained from log2 of processed Red signal/processed Green signal. Agilent software GX 7.3 was used." "data_processing.1"
"Total RNA extracted using RNAprotect Bacterial Reagent (Qiagen) and an RNeasy Mini kit (Qiagen)." "extract_protocol_ch1.1"
"Total RNA extracted using RNAprotect Bacterial Reagent (Qiagen) and an RNeasy Mini kit (Qiagen)." "extract_protocol_ch2.1"
"The cells were cultivated in 100 ml LB broth containing 2 mg/L Cm without triclosan and harvested in mid-logarithmic growth phase (OD600=1.0)." "growth_protocol_ch1.1"
"Escherichia coli" "organism_ch1.1"
"Escherichia coli" "organism_ch2.1"
"NTG-treated E. coli imp fabI(G93V) [E. coli IFN4]" "source_name_ch1.1"
"E. coli imp fabI(G93V) [control]" "source_name_ch2.1"
"Transcription profiles of NTG-treated E. coli imp fabI(G93V) and its control strain in the absence of triclosan" "title.1"
"No triclosan treatment" "treatment_protocol_ch1.1"
"No triclosan treatment" "treatment_protocol_ch2.1"
"strain: E. coli imp 4231(G93V)" "characteristics_ch1.1"
"passage: 4" "characteristics_ch1.2"
"imp mutation: contains a 23 codon deletion allele in imp (increased membrane permeability),substitution of the 93th codon of fabI, NTG treatment; fabI(G93V), substitution of Gly(the 93th codon) of fabI with Val, NTG treatment to be high resistance to triclosan" "characteristics_ch1.3"
"ntg treatment: yes" "characteristics_ch1.4"
"agent: no triclosan" "characteristics_ch1.5"
"strain: E. coli imp 4231(G93V), substitution of the 93th codon of fabI" "characteristics_ch2.1"
"imp mutation: contains a 23 codon detion allele in imp (increased membrane permeability),substitution of the 93th codon of fabI; fabI(G93V), substitution of Gly(the 93th codon) of fabI with Val" "characteristics_ch2.2"
"The cells were cultivated in 100 ml LB broth containing 2 mg/L Cm without triclosan and harvested in mid-logarithmic growth phase (OD600=1.0)." "growth_protocol_ch1.1"
"Escherichia coli" "organism_ch1.1"
"Escherichia coli" "organism_ch2.1"
"NTG-treated E. coli imp fabI(G93V) [E. coli IFN4]" "source_name_ch1.1"
"E. coli imp fabI(G93V) [control]" "source_name_ch2.1"
"No triclosan treatment" "treatment_protocol_ch1.1"
"No triclosan treatment" "treatment_protocol_ch2.1"