********** TRAINING AND TESTING REPORT **********
Training file: training-data-set-70-NER.txt

best params:{'c1': 0.07000813545476688, 'c2': 0.006526088821767511}
best CV score:0.8349604346257782
model size: 0.14M

Flat F1: 0.8113276578597743
             precision    recall  f1-score   support

         OD      1.000     1.000     1.000        21
         pH      1.000     1.000     1.000        10
  Technique      1.000     1.000     1.000        33
        Med      1.000     0.821     0.902        56
       Temp      1.000     0.800     0.889        15
       Vess      0.000     0.000     0.000         0
       Agit      0.000     0.000     0.000         7
      Phase      1.000     0.762     0.865        21
        Air      0.897     0.398     0.551        88
       Anti      0.929     1.000     0.963        13
     Strain      0.000     0.000     0.000         0
      Gtype      0.875     0.808     0.840        78
  Substrain      0.000     0.000     0.000         0
       Supp      0.870     0.838     0.854       136
   Gversion      1.000     0.500     0.667         6

avg / total      0.908     0.756     0.811       484


Top likely transitions:
Temp   -> Temp    6.093166
Anti   -> Anti    5.729524
Gtype  -> Gtype   5.371114
Supp   -> Supp    5.156796
Med    -> Med     4.957345
OD     -> OD      4.900549
Gversion -> Gversion 4.724615
Phase  -> Phase   4.705175
O      -> O       4.204016
Technique -> Technique 3.887796
Air    -> Air     3.626710
pH     -> pH      3.231363
Agit   -> Agit    2.653021
Substrain -> Gtype   2.207130
O      -> Technique 0.828871
Gtype  -> Supp    0.728828
O      -> Gtype   0.715563
Technique -> Air     0.682221
Gtype  -> pH      0.298536
O      -> Supp    0.173517
Temp   -> O       0.081719
O      -> pH      0.033162
Gtype  -> Air     0.001941
Med    -> O       0.001585
Air    -> Med     -0.000885
Supp   -> Air     -0.001681
Anti   -> O       -0.014566
Phase  -> Air     -0.036238
Air    -> OD      -0.057842
Gversion -> O       -0.063546
Gtype  -> Med     -0.120943
O      -> Anti    -0.143027
Anti   -> Phase   -0.153083
Air    -> Agit    -0.193483
Anti   -> Supp    -0.199599
Anti   -> Gtype   -0.221856
Supp   -> Phase   -0.287708
Gtype  -> Phase   -0.297989
OD     -> Air     -0.314353
O      -> Med     -0.323134
Air    -> Supp    -0.368471
OD     -> O       -0.372557
Supp   -> O       -0.395939
Technique -> O       -0.451955
O      -> OD      -0.518974
Phase  -> O       -0.530812
Phase  -> Supp    -0.585439
Temp   -> Med     -0.680806
Air    -> O       -0.720669
Air    -> Phase   -0.847815
Phase  -> OD      -0.853180
Gtype  -> O       -1.006711
Supp   -> Med     -1.205000
O      -> Phase   -1.251901
Substrain -> O       -1.300858
Technique -> pH      -1.370153
O      -> Air     -1.436629
Technique -> Gtype   -1.445464
Med    -> Supp    -2.258613


Top unlikely transitions:
Temp   -> Temp    6.093166
Anti   -> Anti    5.729524
Gtype  -> Gtype   5.371114
Supp   -> Supp    5.156796
Med    -> Med     4.957345
OD     -> OD      4.900549
Gversion -> Gversion 4.724615
Phase  -> Phase   4.705175
O      -> O       4.204016
Technique -> Technique 3.887796
Air    -> Air     3.626710
pH     -> pH      3.231363
Agit   -> Agit    2.653021
Substrain -> Gtype   2.207130
O      -> Technique 0.828871
Gtype  -> Supp    0.728828
O      -> Gtype   0.715563
Technique -> Air     0.682221
Gtype  -> pH      0.298536
O      -> Supp    0.173517
Temp   -> O       0.081719
O      -> pH      0.033162
Gtype  -> Air     0.001941
Med    -> O       0.001585
Air    -> Med     -0.000885
Supp   -> Air     -0.001681
Anti   -> O       -0.014566
Phase  -> Air     -0.036238
Air    -> OD      -0.057842
Gversion -> O       -0.063546
Gtype  -> Med     -0.120943
O      -> Anti    -0.143027
Anti   -> Phase   -0.153083
Air    -> Agit    -0.193483
Anti   -> Supp    -0.199599
Anti   -> Gtype   -0.221856
Supp   -> Phase   -0.287708
Gtype  -> Phase   -0.297989
OD     -> Air     -0.314353
O      -> Med     -0.323134
Air    -> Supp    -0.368471
OD     -> O       -0.372557
Supp   -> O       -0.395939
Technique -> O       -0.451955
O      -> OD      -0.518974
Phase  -> O       -0.530812
Phase  -> Supp    -0.585439
Temp   -> Med     -0.680806
Air    -> O       -0.720669
Air    -> Phase   -0.847815
Phase  -> OD      -0.853180
Gtype  -> O       -1.006711
Supp   -> Med     -1.205000
O      -> Phase   -1.251901
Substrain -> O       -1.300858
Technique -> pH      -1.370153
O      -> Air     -1.436629
Technique -> Gtype   -1.445464
Med    -> Supp    -2.258613


Top positive:
7.072571 Anti     b'-2:lemma:antibody'
6.186888 O        b'-2:lemma:_'
5.748450 Phase    b'-2:lemma:phase'
5.238359 Supp     b'-2:lemma:shake'
4.909658 Technique b'word:ChIP-Seq'
4.831195 Air      b'lemma:anaerobic'
4.745058 Gtype    b'-2:lemma:genotype/variation'
4.451285 Supp     b'lemma:nh4cl'
4.410206 O        b'word:Cra'
4.304956 Technique b'+2:lemma:ph5'
4.216368 O        b'lemma:_'
4.216368 O        b'word:_'
4.205400 Gtype    b'word:WT'
4.170144 Gtype    b'-2:lemma:affyexp'
4.113865 Air      b'word:Aerobic'
4.014636 Technique b'word:ChIP-exo'
3.837083 Technique b'lemma:rna-seq'
3.744152 O        b'postag:VBG'
3.591429 Technique b'word:ChIPSeq'
3.503380 Gtype    b'-2:lemma:genotype'
3.496107 O        b'+2:lemma:\xc2\xb0c'
3.449573 Supp     b'lemma:pq'
3.449573 Supp     b'word:PQ'
3.399102 O        b'lemma:at'
3.398500 Phase    b'lemma:mid-log'
3.398500 Phase    b'word:mid-log'
3.396718 O        b'-1:postag:NNS'
3.329550 O        b'lemma:1'
3.329550 O        b'word:1'
3.302716 O        b'lemma:-'
3.302716 O        b'word:-'
3.302011 Supp     b'lemma:no3'
3.302011 Supp     b'word:NO3'
3.249543 Supp     b'-1:word:Cra'
3.188848 Med      b'word:LB'
3.182005 Supp     b'+2:lemma:iptg'
3.131867 Air      b'word:Anaerobic'
3.099541 O        b'lemma:2'
3.099541 O        b'word:2'
3.062660 O        b'postag::'
3.052579 O        b'+2:lemma:crp'
2.975787 O        b'-1:lemma:lb'
2.934463 O        b'lemma:3'
2.934463 O        b'word:3'
2.916362 O        b'lemma:.'
2.916362 O        b'postag:.'
2.916362 O        b'word:.'
2.910045 O        b'+1:postag:RB'
2.888113 Supp     b'lemma:arginine'
2.863993 Med      b'lemma:MOPS'
2.863993 Med      b'word:MOPS'
2.849624 Strain   b'lemma:k-12'
2.849624 Strain   b'word:K-12'
2.834943 Air      b'postag:RB'
2.830902 Technique b'lemma:chipseq'
2.825592 Gtype    b'lemma:\xce\xb4fur'
2.825592 Gtype    b'word:\xce\x94fur'
2.814878 Supp     b'-2:lemma:media'
2.769117 O        b'-2:lemma:flagtag'
2.757837 Supp     b'lemma:Iron'
2.757837 Supp     b'word:Iron'
2.757837 Supp     b'+1:word:Deficient'
2.757837 Supp     b'-2:lemma:Anaerobic'
2.744559 Med      b'lemma:LB'
2.707165 O        b'lemma:rpob'
2.707165 O        b'word:RpoB'
2.692195 Med      b'+2:lemma:b2'
2.678415 O        b'lemma:with'
2.678415 O        b'word:with'
2.663222 O        b'lemma:culture'
2.659573 Supp     b'+2:lemma:rifampicin'
2.649778 O        b'word:A'
2.632452 Gtype    b'lemma:type'
2.632452 Gtype    b'word:type'
2.628551 Gtype    b'lemma:\xce\xb4cra'
2.619725 Gtype    b'word:\xce\x94cra'
2.559668 Gtype    b'-2:lemma:delta'
2.557877 Air      b'-1:lemma:ChIP-Seq'
2.557877 Air      b'-1:word:ChIP-Seq'
2.549336 Supp     b'-2:lemma:purr'
2.542462 Phase    b'+2:lemma:o.d.'
2.539859 Air      b'-2:lemma:IP'
2.516106 Gversion b'word:ChIP-Seq'
2.512724 Supp     b'+1:lemma:\xc2\xb5m'
2.512724 Supp     b'+1:word:\xc2\xb5M'
2.511533 O        b'-1:lemma:tag'
2.506475 O        b'-1:lemma:ChIP-exo'
2.495422 O        b'-1:word:Aerobic'
2.450371 Air      b'postag:JJ'
2.432059 O        b'postag:VBN'
2.401494 Supp     b'lemma:glucose'
2.401494 Supp     b'word:glucose'
2.393297 O        b'lemma:b'
2.393297 O        b'word:B'
2.386649 O        b'-1:word:Anaerobic'
2.377216 Gtype    b'postag:JJ'
2.321347 Gtype    b'-1:lemma:\xe2\x88\x86'
2.321347 Gtype    b'-1:word:\xe2\x88\x86'
2.316070 Supp     b'lemma:2h'
2.316070 Supp     b'-1:lemma:additional'
2.316070 Supp     b'word:2h'
2.316070 Supp     b'-1:word:additional'
2.314257 O        b'-2:lemma:medium'
2.308505 Gversion b'lemma:chip-seq'
2.295541 Gtype    b'lemma:wt'
2.291476 O        b'word:OmpR'
2.281483 O        b'+1:word:ChIP-Seq'
2.265696 Supp     b'-2:lemma:argr'
2.206596 O        b'-2:lemma:overnight'
2.206125 Supp     b'lemma:acetate'
2.206125 Supp     b'word:acetate'
2.166901 O        b'postag:IN'
2.151322 O        b'-1:word:tag'
2.148840 Med      b'+2:lemma:b1'
2.102449 O        b'+1:postag:NNP'
2.098976 O        b'word:Lrp'
2.092160 Substrain b'-2:lemma:substr'
2.073950 Substrain b'lemma:mg1655'
2.073950 Substrain b'word:MG1655'
2.067377 Air      b'lemma:aerobic'
2.053252 O        b'-2:lemma:='
2.045301 Supp     b'lemma:nacl'
2.045301 Supp     b'word:NaCl'
2.039309 Air      b'lemma:aerobically'
2.039309 Air      b'word:aerobically'
2.037064 Gtype    b'lemma:\xce\xb4ompr'
2.037064 Gtype    b'word:\xce\x94ompR'
2.036954 OD       b'-2:lemma:od450'
2.027424 O        b'-1:word:ChIP-exo'
2.014965 Technique b'-1:lemma:chip-exo'
2.010197 Med      b'+2:postag:CC'
1.994363 Gtype    b'lemma:pk4854'
1.994363 Gtype    b'word:PK4854'
1.986209 O        b'-2:lemma:myc'
1.967352 O        b'lemma:soxr'
1.967352 O        b'word:SoxR'
1.967352 O        b'lemma:soxs'
1.967352 O        b'word:SoxS'
1.950213 Gtype    b'lemma:\xe2\x88\x86'
1.950213 Gtype    b'word:\xe2\x88\x86'
1.944510 Agit     b'lemma:rpm'
1.944510 Agit     b'word:rpm'
1.925989 Gtype    b'lemma:wild-type'
1.906721 Gtype    b'+2:lemma:glucose'
1.894109 Supp     b'lemma:Adenine'
1.894109 Supp     b'word:Adenine'
1.884060 Air      b'-2:lemma:0.3'
1.882232 pH       b'+1:postag:CD'
1.875205 O        b'word:GadX'
1.857904 Temp     b'-2:lemma:keep'
1.857245 Air      b'-1:lemma:-'
1.857245 Air      b'-1:word:-'
1.854655 Air      b'-2:lemma:fnr'
1.848989 O        b'+1:word:WT'
1.833105 Supp     b'lemma:iptg'
1.833105 Supp     b'word:IPTG'
1.819486 O        b'lemma:chip'
1.818200 O        b'+1:lemma:wt'
1.807708 Med      b'lemma:media'
1.807708 Med      b'word:media'
1.790982 Phase    b'-2:lemma:until'
1.790686 Supp     b'lemma:Leu'
1.790686 Supp     b'word:Leu'
1.790686 Supp     b'-2:lemma:Lrp'
1.777139 Supp     b'-1:lemma:Cra'
1.770026 Technique b'-2:lemma:wt'
1.767025 Gtype    b'+1:lemma:type'
1.767025 Gtype    b'+1:word:type'
1.762843 O        b'lemma:gadx'
1.760567 Temp     b'-1:word:sample'
1.758498 O        b'lemma:for'
1.749597 Vess     b'lemma:flask'
1.749597 Vess     b'-1:lemma:warm'
1.749597 Vess     b'word:flask'
1.749597 Vess     b'-1:word:warmed'
1.749597 Vess     b'-2:lemma:pre'
1.749597 Vess     b'+2:lemma:43'
1.744274 O        b'lemma:rep2'
1.744274 O        b'word:rep2'
1.744274 O        b'lemma:rep1'
1.744274 O        b'word:rep1'
1.731828 O        b'-1:lemma:type'
1.731828 O        b'-1:word:type'
1.723949 Gtype    b'lemma:dfnr'
1.723949 Gtype    b'word:dFNR'
1.723072 Technique b'lemma:rnaseq'
1.723072 Technique b'word:RNASeq'
1.722966 Temp     b'-1:lemma:sample'
1.722348 Phase    b'lemma:stationary'
1.722348 Phase    b'word:stationary'
1.722348 Phase    b'lemma:exponential'
1.722348 Phase    b'word:exponential'
1.692392 O        b'word:C'
1.691736 O        b'+1:lemma:250'
1.691736 O        b'+1:word:250'
1.689679 O        b'postag:VBD'
1.679587 O        b'-2:lemma:co2'
1.675670 Air      b'+2:lemma:37'
1.667460 O        b'-1:lemma:0.3'
1.667460 O        b'-1:word:0.3'
1.665129 Technique b'lemma:ChIP-exo'
1.660933 O        b'+1:lemma:rifampicin'
1.660933 O        b'+1:word:rifampicin'
1.658421 O        b'lemma:harbor'
1.658421 O        b'word:harboring'
1.652183 O        b'word:for'
1.643180 Temp     b'+1:lemma:\xc2\xb0c'
1.643180 Temp     b'+1:word:\xc2\xb0C'
1.642670 O        b'lemma:Cra'
1.636345 O        b'+1:lemma:mid-log'
1.636345 O        b'+1:word:mid-log'
1.628567 Strain   b'+1:lemma:substr'
1.628567 Strain   b'+1:word:substr'
1.628567 Strain   b'-2:lemma:str'
1.620363 Supp     b'+1:lemma:1'
1.620363 Supp     b'+1:word:1'
1.610949 O        b'lemma:oxyr'
1.610949 O        b'word:OxyR'
1.608531 Gversion b'-2:lemma:build'
1.601540 O        b'+2:postag:JJ'
1.587727 Temp     b'-1:lemma:\xcf\x8332'
1.587727 Temp     b'-1:word:\xcf\x8332'
1.582682 O        b'+1:lemma:fnr-8myc'
1.582682 O        b'+1:word:Fnr-8myc'
1.581882 O        b'+1:lemma:od600'
1.581882 O        b'+1:word:OD600'
1.577901 Temp     b'-2:lemma:\xcf\x8332'
1.573661 Air      b'lemma:anaeroibc'
1.573661 Air      b'word:Anaeroibc'
1.559535 Supp     b'-2:lemma:induce'
1.540864 OD       b'lemma:0.3'
1.540864 OD       b'word:0.3'
1.540600 O        b'lemma:CEL'
1.540600 O        b'word:CEL'
1.538062 Supp     b'-2:lemma:for'
1.515932 Supp     b'lemma:fructose'
1.515932 Supp     b'word:fructose'
1.515896 pH       b'lemma:ph5'
1.515896 pH       b'+1:lemma:.5'
1.515896 pH       b'word:pH5'
1.515896 pH       b'+1:word:.5'
1.515815 O        b'isLower'
1.514230 O        b'-1:lemma:\xc2\xb0c'
1.514230 O        b'-1:word:\xc2\xb0C'
1.511103 Supp     b'+1:lemma:2'
1.511103 Supp     b'+1:word:2'
1.507152 O        b'-1:lemma:glucose'
1.507152 O        b'-1:word:glucose'
1.506551 O        b'lemma:argr'
1.506551 O        b'word:ArgR'
1.504526 Med      b'lemma:medium'
1.504526 Med      b'word:medium'
1.499761 Supp     b'-2:postag:VBG'
1.485759 Supp     b'-1:lemma:+'
1.485759 Supp     b'-1:word:+'
1.468239 Temp     b'-1:lemma:37'
1.468239 Temp     b'-1:word:37'
1.467425 Supp     b'+2:lemma:feso4'
1.435508 Supp     b'-2:lemma:agent'
1.420498 O        b'-2:lemma:\xe2\x88\x86'
1.413257 O        b'postag:DT'
1.412548 Gtype    b'lemma:\xce\xb4oxyr'
1.412548 Gtype    b'word:\xce\x94oxyR'
1.410961 Supp     b'lemma:rifampicin'
1.410961 Supp     b'word:rifampicin'
1.409580 O        b'lemma:purr'
1.409580 O        b'word:PurR'
1.408939 Supp     b'-1:word:OmpR'
1.405400 O        b'-2:lemma:min'
1.397093 O        b'+1:lemma:pq'
1.397093 O        b'+1:word:PQ'
1.392060 O        b'+1:word:were'
1.387168 Supp     b'-2:lemma:supplement'
1.386234 Gtype    b'-2:postag:NNS'
1.385948 Med      b'-2:lemma:treatment'
1.385122 Phase    b'postag:NN'
1.379482 O        b'lemma::'
1.379482 O        b'word::'
1.373033 Technique b'word:RNA-Seq'
1.367235 O        b'lemma:a'
1.364509 O        b'+2:lemma:constant'
1.364389 O        b'lemma:ompr'
1.363349 Gversion b'lemma:asm584v2'
1.363349 Gversion b'word:ASM584v2'
1.362797 O        b'-2:lemma:ChIP-Seq'
1.359098 Supp     b'-1:lemma:with'
1.359098 Supp     b'-1:word:with'
1.354339 Air      b'-2:lemma:cm20'
1.340444 Med      b'-2:postag:JJ'
1.338091 Technique b'+1:lemma:chip-exo'
1.326361 O        b'lemma:trpr'
1.326361 O        b'word:TrpR'
1.325631 Gtype    b'-1:lemma:rpob'
1.325631 Gtype    b'-1:word:RpoB'
1.324940 Temp     b'lemma:37'
1.324940 Temp     b'word:37'
1.320824 Gtype    b'+1:postag::'
1.316573 Gtype    b'-1:lemma:nsrr'
1.316573 Gtype    b'+1:lemma:flagtag'
1.316573 Gtype    b'-1:word:NsrR'
1.316573 Gtype    b'+1:word:Flagtag'
1.308638 Gtype    b'-1:postag:VBP'
1.301431 Med      b'+2:lemma:+'
1.297299 Temp     b'lemma:43'
1.297299 Temp     b'word:43'
1.294544 Gtype    b'-1:postag:VBG'
1.289954 O        b'-1:postag:NNP'
1.288495 Temp     b'-1:lemma:43'
1.288495 Temp     b'-1:word:43'
1.288010 O        b'-2:lemma:~'
1.281183 Med      b'+1:lemma:g/l'
1.281183 Med      b'+1:word:g/L'
1.278357 Supp     b'+2:lemma:mid-log'
1.259493 Gtype    b'-2:lemma:-rcb-'
1.257994 Gtype    b'postag:-RRB-'
1.256401 Substrain b'+1:lemma:phtpg'
1.256401 Substrain b'+1:word:PhtpG'
1.243567 Air      b'-1:lemma:co2'
1.243567 Air      b'-1:word:CO2'
1.241220 Gtype    b'+1:lemma:pq'
1.241220 Gtype    b'+1:word:PQ'
1.240922 Med      b'isUpper'
1.240787 O        b'+2:postag:VB'
1.232957 O        b'isNumber'
1.229348 O        b'-1:lemma:into'
1.229348 O        b'-1:word:into'
1.228835 Med      b'lemma:m63'
1.228835 Med      b'word:M63'
1.228641 Technique b'lemma:ChIP-Seq'
1.205252 Med      b'+1:lemma:0.4'
1.205252 Med      b'+1:word:0.4'
1.196392 Technique b'-1:lemma:input'
1.196392 Technique b'-1:word:Input'
1.192409 O        b'+2:lemma:rpm'
1.186928 Supp     b'postag:NNP'
1.183364 Gversion b'lemma:u00096'
1.183364 Gversion b'+1:lemma:.2'
1.183364 Gversion b'word:U00096'
1.183364 Gversion b'+1:word:.2'
1.183314 Gtype    b'lemma:\xce\xb4soxs'
1.183314 Gtype    b'word:\xce\x94soxS'
1.182027 O        b'+2:lemma:_'
1.181465 Supp     b'-1:postag:CC'
1.180940 Med      b'-2:lemma:\xc2\xb0c'
1.173663 O        b'postag:CC'
1.172601 Supp     b'lemma:Fe'
1.172601 Supp     b'word:Fe'
1.171262 Temp     b'lemma:\xc2\xb0c'
1.171262 Temp     b'word:\xc2\xb0C'
1.168969 Med      b'-1:word:ml'
1.165509 Med      b'-1:lemma:ml'
1.164907 O        b'+2:lemma:ml'
1.164895 Air      b'-2:postag:CD'
1.164260 Technique b'-2:lemma:Fur'
1.161725 Gversion b'lemma:.2'
1.161725 Gversion b'-1:lemma:u00096'
1.161725 Gversion b'word:.2'
1.161725 Gversion b'-1:word:U00096'
1.158533 Technique b'+1:word:ChIP-exo'
1.154902 Air      b'-2:lemma:nh4cl'
1.140863 Gtype    b'lemma:\xce\xb4soxr'
1.140863 Gtype    b'word:\xce\x94soxR'
1.134560 O        b'lemma:affyexp'
1.134560 O        b'word:affyexp'
1.129592 Agit     b'-1:lemma:250'
1.129592 Agit     b'-1:word:250'
1.125381 Gtype    b'-1:lemma:ptac'
1.125381 Gtype    b'-1:word:Ptac'
1.124256 Gtype    b'lemma:deltaseqa'
1.124256 Gtype    b'-1:lemma:old'
1.124256 Gtype    b'word:deltaSeqA'
1.124256 Gtype    b'-1:word:old'
1.124256 Gtype    b'-2:lemma:seqa'
1.122616 Gtype    b'+1:lemma:ph5'
1.122616 Gtype    b'+1:word:pH5'
1.122616 Gtype    b'+2:lemma:.5'
1.120743 Supp     b'-1:lemma:_'
1.120743 Supp     b'-1:word:_'
1.119008 O        b'-2:lemma:37'
1.115777 O        b'lemma:ml'
1.112555 O        b'lemma:from'
1.112555 O        b'word:from'
1.106221 Supp     b'+2:lemma:-lrb-'
1.105500 OD       b'lemma:od450'
1.105500 OD       b'word:OD450'
1.105500 OD       b'-1:word:At'
1.104248 O        b'+2:lemma:chipseq'
1.101017 Substrain b'lemma:mg1655star'
1.101017 Substrain b'word:MG1655star'
1.098190 Technique b'-1:lemma:IP'
1.098190 Technique b'-1:word:IP'
1.097953 O        b'+1:lemma:coli'
1.097953 O        b'+1:word:coli'
1.092889 Gtype    b'-2:postag:JJ'
1.086339 O        b'lemma:chip-fnr'
1.086339 O        b'word:chip-Fnr'
1.086339 O        b'+2:lemma:fnr8myc'
1.084339 Supp     b'-1:lemma:without'
1.084339 Supp     b'-1:word:without'
1.083992 Gtype    b'lemma:ptac'
1.083992 Gtype    b'word:Ptac'
1.081484 Supp     b'lemma:dpd'
1.081484 Supp     b'word:DPD'
1.067824 Supp     b'+1:lemma:_'
1.067824 Supp     b'+1:word:_'
1.065567 OD       b'+2:lemma:0.3'
1.058428 Anti     b'+1:lemma:antibody'
1.058428 Anti     b'+1:word:antibody'
1.058161 Supp     b'-2:lemma:trpr'
1.056155 Gversion b'-2:postag:VB'
1.051351 Air      b'-1:postag:CD'
1.047761 O        b'+2:lemma:fructose'
1.047292 Gtype    b'lemma:arca8myc'
1.047292 Gtype    b'word:ArcA8myc'
1.047292 Gtype    b'-2:lemma:chip-arca'
1.046169 Supp     b'+2:postag:-LRB-'
1.045802 Agit     b'+1:lemma:rpm'
1.045802 Agit     b'+1:word:rpm'
1.043801 Gtype    b'+1:lemma:with'
1.043801 Gtype    b'+1:word:with'
1.041547 Supp     b'+2:lemma:ph'
1.041152 pH       b'lemma:.5'
1.041152 pH       b'-1:lemma:ph5'
1.041152 pH       b'word:.5'
1.041152 pH       b'-1:word:pH5'
1.038811 O        b'+2:lemma:wt'
1.032963 OD       b'+1:lemma:of'
1.032963 OD       b'+1:word:of'
1.030727 Supp     b'+1:lemma:Deficient'
1.030267 Temp     b'-2:postag:VBD'
1.020543 Gversion b'lemma:000913'
1.020543 Gversion b'word:000913'
1.020543 Gversion b'-2:lemma:nc'
1.017880 O        b'+1:lemma:0.2'
1.017880 O        b'+1:word:0.2'
1.009812 Supp     b'+2:lemma:A'
1.009248 Temp     b'+2:postag:DT'
1.007144 Air      b'+2:postag:CD'
1.006180 Anti     b'-2:lemma:polymerase'
1.003532 O        b'lemma:input'
1.003532 O        b'+1:lemma:chip-seq'
1.003532 O        b'word:Input'
0.996746 Gtype    b'-2:postag::'
0.989002 Supp     b'+1:lemma:be'
0.985929 Technique b'-1:lemma:rna-seq'
0.985929 Technique b'-1:word:RNA-seq'
0.960195 Phase    b'-1:lemma:until'
0.960195 Phase    b'-1:word:until'
0.959923 Supp     b'-2:lemma:20'
0.954442 OD       b'-1:lemma:at'
0.945198 Supp     b'-1:lemma:potassium'
0.945198 Supp     b'-1:word:potassium'
0.945198 Supp     b'-2:lemma:mmol'
0.942700 OD       b'-2:lemma:phase'
0.940093 O        b'+2:lemma:buffer'
0.936489 Med      b'lemma:minimal'
0.936489 Med      b'word:minimal'
0.927519 Med      b'-2:lemma:minimal'
0.924909 Substrain b'-1:lemma:.'
0.924909 Substrain b'-1:postag:.'
0.924909 Substrain b'-1:word:.'
0.922833 Supp     b'+1:postag:VBD'
0.921784 Supp     b'-1:lemma:respiration'
0.921784 Supp     b'+1:lemma:mmol'
0.921784 Supp     b'-1:word:respiration'
0.921784 Supp     b'+1:word:mmol'
0.921784 Supp     b'+2:lemma:potassium'
0.921183 Supp     b'-2:lemma:10'
0.920460 O        b'-1:word:fnr'
0.918784 Air      b'word:anaerobic'
0.916887 O        b'lemma:chip-arca'
0.916887 O        b'word:chip-ArcA'
0.916887 O        b'+2:lemma:arca8myc'
0.916798 Vess     b'-1:postag:VBN'
0.915879 Air      b'-1:postag::'
0.915872 O        b'+2:postag:NNP'
0.912699 O        b'+2:postag:VBD'
0.912536 pH       b'lemma:5.5'
0.912536 pH       b'word:5.5'
0.910193 Supp     b'lemma:30'
0.910193 Supp     b'word:30'
0.907163 O        b'-1:lemma:media'
0.907163 O        b'-1:word:media'
0.903069 Med      b'postag:NNP'
0.894260 OD       b'+1:postag:IN'
0.892439 O        b'-1:lemma:wt'
0.891972 O        b'+1:lemma:\xe2\x88\x86'
0.891972 O        b'+1:word:\xe2\x88\x86'
0.887873 O        b'word:cultures'
0.887487 Med      b'+1:lemma:2.0'
0.887487 Med      b'+1:word:2.0'
0.886846 O        b'-1:lemma:mg1655'
0.886846 O        b'-1:word:MG1655'
0.886846 Phase    b'-1:lemma:mid-log'
0.886846 Phase    b'-1:word:mid-log'
0.884581 Supp     b'word:Arginine'
0.879711 Agit     b'lemma:250'
0.879711 Agit     b'word:250'
0.878693 O        b'-1:lemma:l1'
0.878693 O        b'-1:word:L1'


Top negative:
-0.006461 OD       b'-2:lemma:a'
-0.007026 Supp     b'lemma:vol'
-0.007026 Supp     b'-1:lemma:1/100'
-0.007026 Supp     b'word:vol'
-0.007026 Supp     b'-1:word:1/100'
-0.007257 Gtype    b'-1:postag:CD'
-0.007283 OD       b'isLower'
-0.007662 O        b'-2:lemma:into'
-0.008178 OD       b'-2:postag:DT'
-0.008185 O        b'+1:word:a'
-0.008534 Supp     b'postag:-RRB-'
-0.009692 Phase    b'+1:lemma:aerobically'
-0.009692 Phase    b'+1:word:aerobically'
-0.010116 O        b'-1:lemma:at'
-0.010283 Supp     b'+2:postag:JJ'
-0.010569 O        b'+1:lemma:glucose'
-0.010569 O        b'+1:word:glucose'
-0.010703 Supp     b'-1:lemma:in'
-0.010703 Supp     b'-1:word:in'
-0.011484 OD       b'+1:word:for'
-0.011971 O        b'+2:lemma:medium'
-0.012335 Supp     b'-2:lemma:treat'
-0.012889 Supp     b'lemma:sodium'
-0.012889 Supp     b'word:Sodium'
-0.013476 Gtype    b'-2:postag:NNP'
-0.014247 O        b'-1:lemma:~'
-0.014247 O        b'-1:word:~'
-0.014908 O        b'+1:lemma:_'
-0.014908 O        b'+1:word:_'
-0.015064 O        b'+1:lemma:o2'
-0.015064 O        b'+1:word:O2'
-0.015198 Supp     b'-2:lemma:0.2'
-0.015413 Air      b'-1:postag:CC'
-0.015655 O        b'lemma:o2'
-0.015655 O        b'word:O2'
-0.015684 O        b'+1:lemma:95'
-0.015684 O        b'+1:word:95'
-0.015719 Supp     b'+2:lemma:mm'
-0.016250 OD       b'-2:postag:VBN'
-0.016304 OD       b'lemma:2.0'
-0.016304 OD       b'word:2.0'
-0.016429 O        b'+2:postag:IN'
-0.016502 Air      b'postag:CD'
-0.016593 Supp     b'+1:word:were'
-0.016902 O        b'-2:lemma:0.1'
-0.017099 Supp     b'-1:lemma:.'
-0.017099 Supp     b'-1:postag:.'
-0.017099 Supp     b'-1:word:.'
-0.017630 O        b'+1:lemma:a'
-0.017739 O        b'+2:lemma:n2'
-0.019556 O        b'lemma:0.1'
-0.019556 O        b'word:0.1'
-0.019604 OD       b'-2:lemma:grow'
-0.020505 OD       b'+2:postag:DT'
-0.020859 O        b'+1:lemma:2.0'
-0.020859 O        b'+1:word:2.0'
-0.021397 O        b'+1:lemma:co2'
-0.021397 O        b'+1:word:CO2'
-0.022789 Air      b'-2:lemma:be'
-0.022805 O        b'lemma:acetate'
-0.022805 O        b'word:acetate'
-0.023809 Vess     b'isUpper'
-0.024487 Supp     b'-2:lemma:;'
-0.025152 O        b'-2:lemma:dna'
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-0.029710 Air      b'-1:lemma:aerobically'
-0.029710 Air      b'-1:word:aerobically'
-0.030019 O        b'+1:lemma:n2'
-0.030019 O        b'+1:word:N2'
-0.030288 Agit     b'postag:NN'
-0.030488 Gtype    b'+1:lemma:crp'
-0.030488 Gtype    b'+1:word:crp'
-0.030529 Supp     b'-2:lemma:,'
-0.030529 Supp     b'-2:postag:,'
-0.032816 O        b'-2:lemma:mm'
-0.033284 Supp     b'lemma:ph'
-0.033284 Supp     b'word:pH'
-0.034736 O        b'lemma:the'
-0.035216 Med      b'+1:postag:CC'
-0.036034 O        b'lemma:final'
-0.036034 O        b'word:final'
-0.036982 O        b'+1:lemma:of'
-0.036982 O        b'+1:word:of'
-0.037242 O        b'+1:lemma:medium'
-0.037242 O        b'+1:word:medium'
-0.038686 Supp     b'-2:lemma:with'
-0.038782 O        b'+1:postag:DT'
-0.039065 O        b'-2:lemma:of'
-0.039681 O        b'-2:lemma:70'
-0.040084 OD       b'+2:lemma:2.0'
-0.040801 Temp     b'-1:lemma:at'
-0.042779 Temp     b'-1:word:at'
-0.043525 OD       b'+1:lemma:0.4'
-0.043525 OD       b'+1:word:0.4'
-0.044175 O        b'-1:lemma:ml'
-0.045229 O        b'-1:lemma:phosphate'
-0.045229 O        b'-1:word:phosphate'
-0.047210 Phase    b'+1:postag:NN'
-0.047609 Air      b'lemma:-rrb-'
-0.047609 Air      b'word:-RRB-'
-0.047917 O        b'lemma:phase'
-0.047917 O        b'word:phase'
-0.048400 O        b'+1:lemma:~'
-0.048400 O        b'+1:word:~'
-0.049026 O        b'-2:lemma:to'
-0.049026 O        b'-2:postag:TO'
-0.049152 O        b'-1:lemma:o2'
-0.049152 O        b'-1:word:O2'
-0.049320 Supp     b'lemma:,'
-0.049320 Supp     b'postag:,'
-0.049320 Supp     b'word:,'
-0.050509 O        b'-2:postag:RB'
-0.050981 Air      b'-2:lemma:aerobically'
-0.052329 O        b'-2:lemma:stir'
-0.053980 O        b'+1:lemma:10'
-0.053980 O        b'+1:word:10'
-0.054525 O        b'+1:lemma:fecl2'
-0.054525 O        b'+1:word:FeCl2'
-0.054815 Gtype    b'-1:lemma:mg1655'
-0.054815 Gtype    b'-1:word:MG1655'
-0.055860 O        b'-2:lemma:10'
-0.057059 Vess     b'postag:NN'
-0.057736 O        b'-1:lemma:final'
-0.057736 O        b'-1:word:final'
-0.058089 Phase    b'+2:postag:IN'
-0.058707 Gtype    b'-1:postag:JJ'
-0.059255 O        b'lemma:\xe2\x88\x86'
-0.059255 O        b'word:\xe2\x88\x86'
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-0.059502 O        b'+1:word:5'
-0.059659 O        b'+2:lemma:ph'
-0.060179 Air      b'-1:postag:VBN'
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-0.060691 O        b'word:0.2'
-0.062084 O        b'+1:lemma:m'
-0.062084 O        b'+1:word:M'
-0.064591 Supp     b'+1:postag:VBN'
-0.066001 O        b'-1:lemma:-lrb-'
-0.066001 O        b'-1:word:-LRB-'
-0.066693 Air      b'postag:-RRB-'
-0.068092 O        b'lemma:fecl2'
-0.068092 O        b'word:FeCl2'
-0.071185 O        b'+2:lemma:media'
-0.071243 O        b'+2:lemma:at'
-0.071342 O        b'lemma:co2'
-0.071342 O        b'word:CO2'
-0.071476 O        b'-1:lemma:.'
-0.071476 O        b'-1:postag:.'
-0.071476 O        b'-1:word:.'
-0.073182 O        b'lemma:n2'
-0.073182 O        b'word:N2'
-0.074835 O        b'lemma:m63'
-0.074835 O        b'word:M63'
-0.076399 O        b'-1:lemma:0.2'
-0.076399 O        b'-1:word:0.2'
-0.076647 Technique b'+2:postag:CD'
-0.076887 Med      b'postag:CD'
-0.076998 O        b'-1:postag:DT'
-0.082571 O        b'lemma:;'
-0.082571 O        b'-1:lemma:7.6'
-0.082571 O        b'word:;'
-0.082571 O        b'-1:word:7.6'
-0.082784 O        b'lemma:7.6'
-0.082784 O        b'+1:lemma:;'
-0.082784 O        b'word:7.6'
-0.082784 O        b'+1:word:;'
-0.083875 OD       b'lemma:='
-0.083875 OD       b'word:='
-0.084240 Supp     b'-2:lemma:.'
-0.084240 Supp     b'-2:postag:.'
-0.084944 O        b'+2:lemma:rnase'
-0.086523 O        b'-1:word:ml'
-0.087963 O        b'+2:postag:CC'
-0.088286 Supp     b'-1:lemma:10'
-0.088286 Supp     b'-1:word:10'
-0.088289 Supp     b'-2:postag:NN'
-0.089237 O        b'+2:lemma:sample'
-0.089810 Supp     b'+2:lemma:glucose'
-0.089895 O        b'lemma:nh4cl'
-0.089912 Supp     b'-1:postag:VBN'
-0.090046 O        b'-1:lemma:with'
-0.090046 O        b'-1:word:with'
-0.091875 O        b'-2:postag:-RRB-'
-0.092229 O        b'+1:lemma:1/100'
-0.092229 O        b'+1:word:1/100'
-0.092229 O        b'-2:lemma:sodium'
-0.092229 O        b'+2:lemma:vol'
-0.092524 O        b'+1:lemma:supplement'
-0.092524 O        b'+1:word:supplemented'
-0.093205 O        b'+1:lemma:-rrb-'
-0.093205 O        b'+1:word:-RRB-'
-0.093431 O        b'-1:lemma:m9'
-0.093431 O        b'-1:word:M9'
-0.093561 O        b'-1:lemma:rifampicin'
-0.093561 O        b'-1:word:rifampicin'
-0.094605 Strain   b'postag:NN'
-0.095262 O        b'+2:lemma:~'
-0.096580 O        b'lemma:150'
-0.096580 O        b'+1:lemma:mg/ml'
-0.096580 O        b'word:150'
-0.096580 O        b'+1:word:mg/mL'
-0.096580 O        b'-2:lemma:concentration'
-0.097088 O        b'+1:lemma:phase'
-0.097088 O        b'+1:word:phase'
-0.098391 O        b'lemma:methanol'
-0.098391 O        b'word:methanol'
-0.098391 O        b'-2:lemma:dissolve'
-0.099051 O        b'-1:postag:-LRB-'
-0.099646 O        b'+1:lemma:contain'
-0.099646 O        b'+1:word:containing'
-0.106386 O        b'-1:lemma:mid-log'
-0.106386 O        b'-1:word:mid-log'
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-0.108742 Air      b'-1:word:grown'
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-0.113030 O        b'+1:word:dissolved'
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-0.118760 O        b'lemma:of'
-0.118760 O        b'word:of'
-0.121389 O        b'lemma:\xce\xb4oxyr'
-0.121389 O        b'word:\xce\x94oxyR'
-0.122552 OD       b'isUpper'
-0.127271 Supp     b'postag:IN'
-0.128128 O        b'-1:lemma:1m'
-0.128128 O        b'-1:word:1M'
-0.128128 O        b'+2:lemma:7.6'
-0.128548 O        b'-2:lemma:g/l'
-0.129186 O        b'lemma:anaerobic'
-0.129380 O        b'-2:lemma:minimal'
-0.132222 O        b'-1:lemma:contain'
-0.132222 O        b'-1:word:containing'
-0.132303 O        b'-1:lemma:n2'
-0.132303 O        b'-1:word:N2'
-0.132975 O        b'-1:lemma:until'
-0.132975 O        b'-1:word:until'
-0.137843 O        b'+2:lemma:fnr'
-0.138915 O        b'-2:lemma:grow'
-0.139978 Gtype    b'-1:postag:NN'
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-0.141614 O        b'-1:lemma:mm'
-0.141614 O        b'-1:word:mM'
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-0.142578 O        b'-1:word:of'
-0.142944 Temp     b'+2:postag:IN'
-0.143155 O        b'+1:lemma:-lrb-'
-0.143155 O        b'+1:word:-LRB-'
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-0.150389 O        b'-2:postag:DT'
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-0.153076 O        b'+1:lemma:mm'
-0.153076 O        b'+1:word:mM'
-0.153243 Temp     b'-2:postag:NN'
-0.153543 Supp     b'+1:lemma:acetate'
-0.153543 Supp     b'+1:word:acetate'
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-0.157269 O        b'-2:lemma:-lrb-'
-0.158336 O        b'+1:lemma:.'
-0.158336 O        b'+1:postag:.'
-0.158336 O        b'+1:word:.'
-0.159229 Med      b'+1:postag:IN'
-0.160293 OD       b'postag:NN'
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-0.160438 O        b'word:20'
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-0.192176 Supp     b'+1:lemma:dpd'
-0.192176 Supp     b'+1:word:DPD'
-0.195889 O        b'-1:lemma:fresh'
-0.195889 O        b'-1:word:fresh'
-0.196496 Air      b'-1:lemma:grow'
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-0.201493 Temp     b'+2:lemma:with'
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-0.476415 O        b'-1:lemma:vol'
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-0.476415 O        b'-2:lemma:1/100'
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-1.182656 O        b'+1:lemma:1'
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-1.195355 Gtype    b'isNumber'
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-2.100608 O        b'-1:lemma::'
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-2.290183 O        b'+2:lemma:iptg'
-2.589424 O        b'-1:lemma:_'
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-2.912912 O        b'+2:lemma:rifampicin'
-3.088754 Phase    b'postag:JJ'
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