********** TRAINING AND TESTING REPORT **********
Training file: training-data-set-70-NER.txt

best params:{'c1': 0.001366471373335289, 'c2': 0.04676457694769755}
best CV score:0.8201549270256682
model size: 0.24M

Flat F1: 0.8012483038260111
             precision    recall  f1-score   support

         OD      1.000     1.000     1.000        21
         pH      1.000     1.000     1.000        10
  Technique      1.000     1.000     1.000        33
        Med      1.000     0.821     0.902        56
       Temp      0.857     0.800     0.828        15
       Vess      0.000     0.000     0.000         0
       Agit      0.000     0.000     0.000         7
      Phase      1.000     0.762     0.865        21
        Air      0.897     0.398     0.551        88
       Anti      0.889     0.615     0.727        13
     Strain      0.000     0.000     0.000         0
      Gtype      0.938     0.769     0.845        78
  Substrain      0.000     0.000     0.000         0
       Supp      0.851     0.838     0.844       136
   Gversion      1.000     0.500     0.667         6

avg / total      0.907     0.740     0.801       484


Top likely transitions:
OD     -> OD      4.570462
Med    -> Med     4.548811
Temp   -> Temp    4.519654
Air    -> Air     4.413084
Gtype  -> Gtype   4.377402
Anti   -> Anti    4.253336
O      -> O       3.936938
Supp   -> Supp    3.935852
Phase  -> Phase   3.573930
Gversion -> Gversion 3.365175
Technique -> Technique 2.529759
pH     -> pH      2.503807
Agit   -> Agit    1.375535
Substrain -> Gtype   1.275154
Technique -> Air     0.999156
O      -> Technique 0.687119
O      -> Gtype   0.661996
Gtype  -> Supp    0.594993
O      -> Supp    0.467883
Gtype  -> pH      0.283181
Air    -> O       0.282018
Gtype  -> Air     0.279393
O      -> Strain  0.247138
O      -> Vess    0.187582
O      -> pH      0.180724
Strain -> O       0.088574
Vess   -> O       0.014401
Vess   -> Phase   -0.000644
O      -> Phase   -0.002691
Substrain -> Gversion -0.003091
Strain -> Gversion -0.005905
Agit   -> Anti    -0.007593
Strain -> Agit    -0.008132
Gversion -> Substrain -0.009501
Anti   -> Strain  -0.009962
Agit   -> Strain  -0.010277
Agit   -> Gversion -0.010457
Gversion -> Vess    -0.010987
Agit   -> Phase   -0.011401
Substrain -> Phase   -0.011621
Phase  -> Agit    -0.012196
Substrain -> Anti    -0.012412
Temp   -> Substrain -0.012733
Strain -> Technique -0.012877
OD     -> Substrain -0.013654
Gversion -> Strain  -0.013996
Vess   -> OD      -0.014117
Agit   -> pH      -0.014606
Substrain -> Strain  -0.015086
Temp   -> Vess    -0.015423
Substrain -> Temp    -0.016028
Phase  -> Air     -0.017470
pH     -> Strain  -0.019235
Strain -> Temp    -0.019915
Technique -> Vess    -0.021152
Phase  -> Vess    -0.021258
Vess   -> Technique -0.021336
Strain -> Anti    -0.022522
Temp   -> Strain  -0.024973
OD     -> Vess    -0.025559
pH     -> Substrain -0.027878
Air    -> Vess    -0.028404
pH     -> Vess    -0.028453
Anti   -> Agit    -0.029340
Vess   -> Med     -0.029513
OD     -> Anti    -0.029648
Med    -> Substrain -0.030464
OD     -> Phase   -0.031850
O      -> Temp    -0.031949
pH     -> Phase   -0.032308
Vess   -> Gtype   -0.034152
Phase  -> Substrain -0.034805
Vess   -> Temp    -0.035493
Agit   -> Temp    -0.036647
Anti   -> Substrain -0.036876
Strain -> Med     -0.038164
Strain -> Air     -0.039535
Vess   -> Air     -0.039934
pH     -> Anti    -0.040161
Anti   -> Vess    -0.043804
Air    -> Strain  -0.047161
Phase  -> Strain  -0.047492
Strain -> pH      -0.049521
Substrain -> pH      -0.050876
Temp   -> Agit    -0.051990
Temp   -> pH      -0.053406
Phase  -> pH      -0.053483
Substrain -> Med     -0.054650
Med    -> Strain  -0.056012
Substrain -> Technique -0.058576
OD     -> Strain  -0.059493
Temp   -> Gversion -0.060855
Substrain -> Air     -0.064701
pH     -> Technique -0.064784
Strain -> Phase   -0.065318
Substrain -> OD      -0.068380
OD     -> Gversion -0.068714
Agit   -> Med     -0.071469
Temp   -> Anti    -0.072372
Temp   -> Phase   -0.073305
OD     -> O       -0.073690
Gversion -> Agit    -0.076044
Anti   -> Gversion -0.076365
Gtype  -> Strain  -0.078317
Agit   -> Vess    -0.078934
Air    -> Substrain -0.081630
Technique -> Strain  -0.083145
Strain -> OD      -0.084225
Med    -> Vess    -0.084443
Phase  -> Gversion -0.087246
Technique -> Phase   -0.089045
Agit   -> OD      -0.089708
Agit   -> Gtype   -0.089760
Gversion -> Phase   -0.090564
Vess   -> Supp    -0.092426
Technique -> Substrain -0.098939
pH     -> Med     -0.101129
Air    -> Anti    -0.101898
Air    -> pH      -0.102020
Gversion -> Anti    -0.104280
Gtype  -> Vess    -0.104517
OD     -> Agit    -0.107453
Med    -> Phase   -0.109327
OD     -> pH      -0.116855
Supp   -> Strain  -0.117249
pH     -> Gtype   -0.120023
Temp   -> Technique -0.123187
Med    -> Gversion -0.124762
Gversion -> pH      -0.125936
pH     -> O       -0.127445
Med    -> Anti    -0.128913
Gversion -> Temp    -0.129934
pH     -> Gversion -0.133176
pH     -> Agit    -0.133588
OD     -> Gtype   -0.145457
Technique -> Anti    -0.149142
O      -> Agit    -0.151498
Med    -> Agit    -0.154489
Agit   -> O       -0.159760
pH     -> Temp    -0.163156
O      -> Anti    -0.164402
Anti   -> Air     -0.165679
Gversion -> Med     -0.171168
Gtype  -> Agit    -0.172646
Supp   -> Substrain -0.175324
Gversion -> OD      -0.176473
pH     -> OD      -0.180960
Anti   -> pH      -0.186724
pH     -> Air     -0.188986
Substrain -> Supp    -0.189024
Anti   -> OD      -0.190697
Agit   -> Technique -0.191171
Air    -> Gversion -0.193107
Temp   -> OD      -0.197986
Strain -> Supp    -0.198810
Air    -> Gtype   -0.206318
OD     -> Med     -0.212477
Med    -> OD      -0.212993
Technique -> Agit    -0.217161
Med    -> pH      -0.217633
Temp   -> Air     -0.219172
Temp   -> Gtype   -0.225091
Technique -> Temp    -0.233414
Gtype  -> Substrain -0.234975
Temp   -> O       -0.238050
Anti   -> Technique -0.239536
Phase  -> Temp    -0.254388
Strain -> Gtype   -0.259369
Gversion -> Air     -0.260394
Supp   -> Agit    -0.264021
Med    -> Gtype   -0.270023
Gversion -> Technique -0.281354
Supp   -> Vess    -0.286534
O      -> Substrain -0.297657
Med    -> Temp    -0.303739
Agit   -> Supp    -0.304275
O      -> Gversion -0.305745
Gversion -> Gtype   -0.318342
Med    -> Air     -0.322455
Anti   -> Phase   -0.329391
Med    -> O       -0.331070
Phase  -> Gtype   -0.331638
Agit   -> Air     -0.334445
Air    -> Technique -0.338612
Anti   -> O       -0.349901
Air    -> OD      -0.355128
Phase  -> Anti    -0.372225
Technique -> Med     -0.374924
OD     -> Technique -0.384158
Temp   -> Supp    -0.387680
OD     -> Temp    -0.395100
Anti   -> Med     -0.421855
Technique -> Gversion -0.423722
Supp   -> Phase   -0.436425
Gtype  -> OD      -0.446557
Anti   -> Gtype   -0.452101
pH     -> Supp    -0.466253
Supp   -> pH      -0.478619
Gversion -> Supp    -0.485751
Med    -> Technique -0.496255
Phase  -> Supp    -0.501037
Supp   -> Anti    -0.501786
Gtype  -> Gversion -0.502176
Air    -> Temp    -0.507458
Gtype  -> Technique -0.519478
Supp   -> Air     -0.519611
OD     -> Supp    -0.521706
Supp   -> O       -0.538124
Phase  -> OD      -0.550877
Gtype  -> Temp    -0.554059
Technique -> Supp    -0.558909
Air    -> Med     -0.566233
Supp   -> Technique -0.594965
Supp   -> Temp    -0.599131
Supp   -> Gversion -0.605115
Gtype  -> Phase   -0.621487
O      -> OD      -0.630713
Supp   -> Gtype   -0.642350
Gversion -> O       -0.662533
Phase  -> O       -0.666821
Supp   -> OD      -0.670491
Anti   -> Supp    -0.686204
Air    -> Phase   -0.688586
Phase  -> Med     -0.691949
Air    -> Supp    -0.724534
OD     -> Air     -0.731798
O      -> Air     -0.736291
Phase  -> Technique -0.758952
Gtype  -> Med     -0.781788
Air    -> Agit    -0.791347
Technique -> OD      -0.817343
Temp   -> Med     -0.848696
Anti   -> Temp    -0.863191
Gtype  -> Anti    -0.900475
Technique -> Gtype   -0.953348
Gtype  -> O       -1.000121
O      -> Med     -1.018204
Technique -> O       -1.127460
Substrain -> O       -1.255993
Technique -> pH      -1.481191
Med    -> Supp    -1.723832
Supp   -> Med     -1.765962


Top unlikely transitions:
OD     -> OD      4.570462
Med    -> Med     4.548811
Temp   -> Temp    4.519654
Air    -> Air     4.413084
Gtype  -> Gtype   4.377402
Anti   -> Anti    4.253336
O      -> O       3.936938
Supp   -> Supp    3.935852
Phase  -> Phase   3.573930
Gversion -> Gversion 3.365175
Technique -> Technique 2.529759
pH     -> pH      2.503807
Agit   -> Agit    1.375535
Substrain -> Gtype   1.275154
Technique -> Air     0.999156
O      -> Technique 0.687119
O      -> Gtype   0.661996
Gtype  -> Supp    0.594993
O      -> Supp    0.467883
Gtype  -> pH      0.283181
Air    -> O       0.282018
Gtype  -> Air     0.279393
O      -> Strain  0.247138
O      -> Vess    0.187582
O      -> pH      0.180724
Strain -> O       0.088574
Vess   -> O       0.014401
Vess   -> Phase   -0.000644
O      -> Phase   -0.002691
Substrain -> Gversion -0.003091
Strain -> Gversion -0.005905
Agit   -> Anti    -0.007593
Strain -> Agit    -0.008132
Gversion -> Substrain -0.009501
Anti   -> Strain  -0.009962
Agit   -> Strain  -0.010277
Agit   -> Gversion -0.010457
Gversion -> Vess    -0.010987
Agit   -> Phase   -0.011401
Substrain -> Phase   -0.011621
Phase  -> Agit    -0.012196
Substrain -> Anti    -0.012412
Temp   -> Substrain -0.012733
Strain -> Technique -0.012877
OD     -> Substrain -0.013654
Gversion -> Strain  -0.013996
Vess   -> OD      -0.014117
Agit   -> pH      -0.014606
Substrain -> Strain  -0.015086
Temp   -> Vess    -0.015423
Substrain -> Temp    -0.016028
Phase  -> Air     -0.017470
pH     -> Strain  -0.019235
Strain -> Temp    -0.019915
Technique -> Vess    -0.021152
Phase  -> Vess    -0.021258
Vess   -> Technique -0.021336
Strain -> Anti    -0.022522
Temp   -> Strain  -0.024973
OD     -> Vess    -0.025559
pH     -> Substrain -0.027878
Air    -> Vess    -0.028404
pH     -> Vess    -0.028453
Anti   -> Agit    -0.029340
Vess   -> Med     -0.029513
OD     -> Anti    -0.029648
Med    -> Substrain -0.030464
OD     -> Phase   -0.031850
O      -> Temp    -0.031949
pH     -> Phase   -0.032308
Vess   -> Gtype   -0.034152
Phase  -> Substrain -0.034805
Vess   -> Temp    -0.035493
Agit   -> Temp    -0.036647
Anti   -> Substrain -0.036876
Strain -> Med     -0.038164
Strain -> Air     -0.039535
Vess   -> Air     -0.039934
pH     -> Anti    -0.040161
Anti   -> Vess    -0.043804
Air    -> Strain  -0.047161
Phase  -> Strain  -0.047492
Strain -> pH      -0.049521
Substrain -> pH      -0.050876
Temp   -> Agit    -0.051990
Temp   -> pH      -0.053406
Phase  -> pH      -0.053483
Substrain -> Med     -0.054650
Med    -> Strain  -0.056012
Substrain -> Technique -0.058576
OD     -> Strain  -0.059493
Temp   -> Gversion -0.060855
Substrain -> Air     -0.064701
pH     -> Technique -0.064784
Strain -> Phase   -0.065318
Substrain -> OD      -0.068380
OD     -> Gversion -0.068714
Agit   -> Med     -0.071469
Temp   -> Anti    -0.072372
Temp   -> Phase   -0.073305
OD     -> O       -0.073690
Gversion -> Agit    -0.076044
Anti   -> Gversion -0.076365
Gtype  -> Strain  -0.078317
Agit   -> Vess    -0.078934
Air    -> Substrain -0.081630
Technique -> Strain  -0.083145
Strain -> OD      -0.084225
Med    -> Vess    -0.084443
Phase  -> Gversion -0.087246
Technique -> Phase   -0.089045
Agit   -> OD      -0.089708
Agit   -> Gtype   -0.089760
Gversion -> Phase   -0.090564
Vess   -> Supp    -0.092426
Technique -> Substrain -0.098939
pH     -> Med     -0.101129
Air    -> Anti    -0.101898
Air    -> pH      -0.102020
Gversion -> Anti    -0.104280
Gtype  -> Vess    -0.104517
OD     -> Agit    -0.107453
Med    -> Phase   -0.109327
OD     -> pH      -0.116855
Supp   -> Strain  -0.117249
pH     -> Gtype   -0.120023
Temp   -> Technique -0.123187
Med    -> Gversion -0.124762
Gversion -> pH      -0.125936
pH     -> O       -0.127445
Med    -> Anti    -0.128913
Gversion -> Temp    -0.129934
pH     -> Gversion -0.133176
pH     -> Agit    -0.133588
OD     -> Gtype   -0.145457
Technique -> Anti    -0.149142
O      -> Agit    -0.151498
Med    -> Agit    -0.154489
Agit   -> O       -0.159760
pH     -> Temp    -0.163156
O      -> Anti    -0.164402
Anti   -> Air     -0.165679
Gversion -> Med     -0.171168
Gtype  -> Agit    -0.172646
Supp   -> Substrain -0.175324
Gversion -> OD      -0.176473
pH     -> OD      -0.180960
Anti   -> pH      -0.186724
pH     -> Air     -0.188986
Substrain -> Supp    -0.189024
Anti   -> OD      -0.190697
Agit   -> Technique -0.191171
Air    -> Gversion -0.193107
Temp   -> OD      -0.197986
Strain -> Supp    -0.198810
Air    -> Gtype   -0.206318
OD     -> Med     -0.212477
Med    -> OD      -0.212993
Technique -> Agit    -0.217161
Med    -> pH      -0.217633
Temp   -> Air     -0.219172
Temp   -> Gtype   -0.225091
Technique -> Temp    -0.233414
Gtype  -> Substrain -0.234975
Temp   -> O       -0.238050
Anti   -> Technique -0.239536
Phase  -> Temp    -0.254388
Strain -> Gtype   -0.259369
Gversion -> Air     -0.260394
Supp   -> Agit    -0.264021
Med    -> Gtype   -0.270023
Gversion -> Technique -0.281354
Supp   -> Vess    -0.286534
O      -> Substrain -0.297657
Med    -> Temp    -0.303739
Agit   -> Supp    -0.304275
O      -> Gversion -0.305745
Gversion -> Gtype   -0.318342
Med    -> Air     -0.322455
Anti   -> Phase   -0.329391
Med    -> O       -0.331070
Phase  -> Gtype   -0.331638
Agit   -> Air     -0.334445
Air    -> Technique -0.338612
Anti   -> O       -0.349901
Air    -> OD      -0.355128
Phase  -> Anti    -0.372225
Technique -> Med     -0.374924
OD     -> Technique -0.384158
Temp   -> Supp    -0.387680
OD     -> Temp    -0.395100
Anti   -> Med     -0.421855
Technique -> Gversion -0.423722
Supp   -> Phase   -0.436425
Gtype  -> OD      -0.446557
Anti   -> Gtype   -0.452101
pH     -> Supp    -0.466253
Supp   -> pH      -0.478619
Gversion -> Supp    -0.485751
Med    -> Technique -0.496255
Phase  -> Supp    -0.501037
Supp   -> Anti    -0.501786
Gtype  -> Gversion -0.502176
Air    -> Temp    -0.507458
Gtype  -> Technique -0.519478
Supp   -> Air     -0.519611
OD     -> Supp    -0.521706
Supp   -> O       -0.538124
Phase  -> OD      -0.550877
Gtype  -> Temp    -0.554059
Technique -> Supp    -0.558909
Air    -> Med     -0.566233
Supp   -> Technique -0.594965
Supp   -> Temp    -0.599131
Supp   -> Gversion -0.605115
Gtype  -> Phase   -0.621487
O      -> OD      -0.630713
Supp   -> Gtype   -0.642350
Gversion -> O       -0.662533
Phase  -> O       -0.666821
Supp   -> OD      -0.670491
Anti   -> Supp    -0.686204
Air    -> Phase   -0.688586
Phase  -> Med     -0.691949
Air    -> Supp    -0.724534
OD     -> Air     -0.731798
O      -> Air     -0.736291
Phase  -> Technique -0.758952
Gtype  -> Med     -0.781788
Air    -> Agit    -0.791347
Technique -> OD      -0.817343
Temp   -> Med     -0.848696
Anti   -> Temp    -0.863191
Gtype  -> Anti    -0.900475
Technique -> Gtype   -0.953348
Gtype  -> O       -1.000121
O      -> Med     -1.018204
Technique -> O       -1.127460
Substrain -> O       -1.255993
Technique -> pH      -1.481191
Med    -> Supp    -1.723832
Supp   -> Med     -1.765962


Top positive:
4.692630 O        b'lemma:_'
4.692630 O        b'word:_'
3.456398 Air      b'lemma:anaerobic'
3.407768 Gtype    b'word:WT'
3.265390 O        b'postag::'
3.107553 Gtype    b'lemma:wt'
3.089961 Gtype    b'hGreek'
3.060381 O        b'word:Cra'
2.904421 Supp     b'lemma:Iron'
2.904421 Supp     b'word:Iron'
2.904421 Supp     b'+1:word:Deficient'
2.897501 Air      b'postag:RB'
2.764634 Technique b'word:ChIPSeq'
2.647920 Air      b'word:Aerobic'
2.627817 Supp     b'lemma:pq'
2.627817 Supp     b'word:PQ'
2.590535 Supp     b'lemma:nh4cl'
2.577163 Technique b'lemma:chipseq'
2.525664 Air      b'word:Anaerobic'
2.470916 Supp     b'-1:word:Cra'
2.438235 Supp     b'+1:lemma:\xc2\xb5m'
2.438235 Supp     b'+1:word:\xc2\xb5M'
2.402258 Technique b'word:ChIP-exo'
2.384782 Supp     b'lemma:2h'
2.384782 Supp     b'-1:lemma:additional'
2.384782 Supp     b'word:2h'
2.384782 Supp     b'-1:word:additional'
2.372558 Phase    b'lemma:stationary'
2.372558 Phase    b'word:stationary'
2.372558 Phase    b'lemma:exponential'
2.372558 Phase    b'word:exponential'
2.281049 O        b'lemma:Cra'
2.276678 Supp     b'lemma:glucose'
2.276678 Supp     b'word:glucose'
2.247854 O        b'lemma:.'
2.247854 O        b'postag:.'
2.247854 O        b'word:.'
2.211007 Med      b'word:LB'
2.162929 Gversion b'lemma:asm584v2'
2.162929 Gversion b'word:ASM584v2'
2.159318 Med      b'lemma:MOPS'
2.159318 Med      b'word:MOPS'
2.137208 Air      b'lemma:aerobically'
2.137208 Air      b'word:aerobically'
2.087445 O        b'-1:lemma:tag'
2.080091 O        b'-1:word:tag'
2.071580 O        b'lemma:-'
2.071580 O        b'word:-'
2.066281 O        b'postag:VBG'
2.063696 O        b'postag:IN'
2.061344 O        b'+1:postag:RB'
2.045669 Gtype    b'lemma:arca8myc'
2.045669 Gtype    b'word:ArcA8myc'
2.034947 O        b'lemma:1'
2.034947 O        b'word:1'
2.021092 Strain   b'lemma:k-12'
2.021092 Strain   b'word:K-12'
2.001697 Technique b'lemma:ChIP-exo'
1.998679 Gtype    b'-1:lemma:\xe2\x88\x86'
1.998679 Gtype    b'-1:word:\xe2\x88\x86'
1.985002 O        b'lemma:2'
1.985002 O        b'word:2'
1.966492 Gtype    b'lemma:type'
1.966492 Gtype    b'word:type'
1.952795 O        b'-1:lemma:lb'
1.929938 Phase    b'lemma:mid-log'
1.929938 Phase    b'word:mid-log'
1.911243 Supp     b'lemma:arginine'
1.895015 Air      b'word:anaerobic'
1.883678 O        b'lemma:chip-arca'
1.883678 O        b'word:chip-ArcA'
1.875662 O        b'lemma:rep2'
1.875662 O        b'word:rep2'
1.875662 O        b'lemma:rep1'
1.875662 O        b'word:rep1'
1.850959 Gversion b'lemma:chip-seq'
1.841063 O        b'lemma:chip-fnr'
1.841063 O        b'word:chip-Fnr'
1.836052 Gversion b'word:ChIP-Seq'
1.832231 Air      b'lemma:aerobic'
1.820341 O        b'lemma:3'
1.820341 O        b'word:3'
1.805385 O        b'lemma:b'
1.805385 O        b'word:B'
1.802977 Air      b'lemma:anaeroibc'
1.802977 Air      b'word:Anaeroibc'
1.798421 O        b'+1:lemma:pq'
1.798421 O        b'+1:word:PQ'
1.790423 Air      b'postag:JJ'
1.790368 Vess     b'lemma:flask'
1.790368 Vess     b'-1:lemma:warm'
1.790368 Vess     b'word:flask'
1.790368 Vess     b'-1:word:warmed'
1.785914 O        b'-1:word:Anaerobic'
1.776808 pH       b'+1:postag:CD'
1.773358 Supp     b'-1:lemma:Cra'
1.765647 Supp     b'lemma:no3'
1.765647 Supp     b'word:NO3'
1.760226 Technique b'hUpper'
1.757921 O        b'lemma:at'
1.754526 Med      b'lemma:LB'
1.741891 Phase    b'postag:NN'
1.741714 Supp     b'lemma:rifampicin'
1.741714 Supp     b'word:rifampicin'
1.733941 Substrain b'lemma:mg1655'
1.733941 Substrain b'word:MG1655'
1.726610 O        b'lemma:rpob'
1.726610 O        b'word:RpoB'
1.726150 O        b'-1:lemma:0.3'
1.726150 O        b'-1:word:0.3'
1.726066 Gtype    b'+1:lemma:type'
1.726066 Gtype    b'+1:word:type'
1.721020 O        b'lemma:\xcf\x8332'
1.721020 O        b'word:\xcf\x8332'
1.703488 Med      b'+1:lemma:0.4'
1.703488 Med      b'+1:word:0.4'
1.698355 Air      b'-1:lemma:-'
1.698355 Air      b'-1:word:-'
1.696647 Supp     b'lemma:Fe'
1.696647 Supp     b'word:Fe'
1.692781 O        b'word:A'
1.677999 Anti     b'lemma:none'
1.677999 Anti     b'word:none'
1.677729 Air      b'-1:lemma:ChIP-Seq'
1.677729 Air      b'-1:word:ChIP-Seq'
1.665383 O        b'lemma:with'
1.665383 O        b'word:with'
1.660523 Gtype    b'lemma:dfnr'
1.660523 Gtype    b'word:dFNR'
1.650929 Gtype    b'lemma:pk4854'
1.650929 Gtype    b'word:PK4854'
1.648966 O        b'lemma:CEL'
1.648966 O        b'word:CEL'
1.646281 Gtype    b'lemma:wildtype'
1.642923 Supp     b'+1:lemma:Deficient'
1.638611 Technique b'word:ChIP-Seq'
1.623809 Supp     b'lemma:Adenine'
1.623809 Supp     b'word:Adenine'
1.621745 Technique b'lemma:rnaseq'
1.621745 Technique b'word:RNASeq'
1.608298 Supp     b'lemma:acetate'
1.608298 Supp     b'word:acetate'
1.604804 Anti     b'lemma:\xcf\x8332'
1.604804 Anti     b'word:\xcf\x8332'
1.604722 Vess     b'-1:postag:VBN'
1.601944 Anti     b'lemma:seqa'
1.601944 Anti     b'word:SeqA'
1.601376 Supp     b'lemma:Leu'
1.601376 Supp     b'word:Leu'
1.601231 Supp     b'lemma:nacl'
1.601231 Supp     b'word:NaCl'
1.591129 O        b'-1:lemma:glucose'
1.591129 O        b'-1:word:glucose'
1.576005 Gtype    b'lemma:\xe2\x88\x86'
1.576005 Gtype    b'word:\xe2\x88\x86'
1.575962 Gtype    b'lemma:delta-fnr'
1.575962 Gtype    b'word:delta-fnr'
1.558303 Substrain b'lemma:mg1655star'
1.558303 Substrain b'word:MG1655star'
1.557411 Gtype    b'lemma:fnr8myc'
1.557411 Gtype    b'word:Fnr8myc'
1.550260 Technique b'lemma:rna-seq'
1.546425 Gtype    b'lemma:WT'
1.530645 O        b'+1:word:were'
1.528297 O        b'-1:postag:NNS'
1.525625 Supp     b'lemma:dpd'
1.525625 Supp     b'word:DPD'
1.523143 pH       b'lemma:ph5'
1.523143 pH       b'+1:lemma:.5'
1.523143 pH       b'word:pH5'
1.523143 pH       b'+1:word:.5'
1.493013 Temp     b'-1:lemma:37'
1.493013 Temp     b'-1:word:37'
1.474214 O        b'lemma:genotype/variation'
1.474214 O        b'word:genotype/variation'
1.467594 Supp     b'+1:word:hours'
1.465756 Med      b'-1:word:ml'
1.464668 Med      b'-1:lemma:ml'
1.460588 O        b'word:Lrp'
1.460276 Med      b'postag:NNP'
1.457085 Strain   b'+1:lemma:substr'
1.457085 Strain   b'+1:word:substr'
1.451870 O        b'-1:word:Aerobic'
1.445481 O        b'symb'
1.439439 Supp     b'-1:lemma:+'
1.439439 Supp     b'-1:word:+'
1.425409 Gtype    b'hLower'
1.414534 Agit     b'lemma:rpm'
1.414534 Agit     b'word:rpm'
1.411476 O        b'word:OmpR'
1.411225 Gtype    b'lemma:deltaseqa'
1.411225 Gtype    b'-1:lemma:old'
1.411225 Gtype    b'word:deltaSeqA'
1.411225 Gtype    b'-1:word:old'
1.409920 O        b'+1:lemma:od600'
1.409920 O        b'+1:word:OD600'
1.405462 Med      b'+1:lemma:2.0'
1.405462 Med      b'+1:word:2.0'
1.400071 O        b'+1:lemma:wt'
1.399824 Technique b'-1:lemma:_'
1.399824 Technique b'-1:word:_'
1.397247 O        b'+1:word:WT'
1.396685 Temp     b'+1:lemma:\xc2\xb0c'
1.396685 Temp     b'+1:word:\xc2\xb0C'
1.396103 Gtype    b'hUpper'
1.380528 O        b'-1:lemma:into'
1.380528 O        b'-1:word:into'
1.376225 Supp     b'word:NH4Cl'
1.375842 Agit     b'+1:lemma:rpm'
1.375842 Agit     b'+1:word:rpm'
1.369110 OD       b'+1:postag:IN'
1.363111 O        b'word:C'
1.360807 Gtype    b'+1:postag::'
1.356752 O        b'-1:lemma:ChIP-exo'
1.356653 Gversion b'postag:NN'
1.356137 Supp     b'lemma:iptg'
1.356137 Supp     b'word:IPTG'
1.352741 O        b'lemma:2-3'
1.352741 O        b'word:2-3'
1.351791 O        b'lemma:for'
1.349413 O        b'postag:VBN'
1.347956 Supp     b'+1:lemma:1'
1.347956 Supp     b'+1:word:1'
1.347155 Supp     b'-1:lemma:vol'
1.347155 Supp     b'-1:word:vol'
1.343311 O        b'+1:lemma:k-12'
1.343311 O        b'+1:word:K-12'
1.340540 Supp     b'+1:lemma:mm'
1.340540 Supp     b'+1:word:mM'
1.323537 O        b'word:for'
1.320342 Gtype    b'lemma:crp'
1.320342 Gtype    b'word:crp'
1.317101 Temp     b'lemma:43'
1.317101 Temp     b'word:43'
1.312622 Supp     b'-1:postag:IN'
1.306710 O        b'+1:lemma:ph5'
1.306710 O        b'+1:word:pH5'
1.297415 Supp     b'+1:lemma:deficient'
1.296633 Med      b'+1:postag:CD'
1.292899 Gversion b'lemma:nc'
1.292899 Gversion b'word:NC'
1.291036 Technique b'hLower'
1.290726 Substrain b'-1:lemma:.'
1.290726 Substrain b'-1:postag:.'
1.290726 Substrain b'-1:word:.'
1.289990 Substrain b'+1:lemma:phtpg'
1.289990 Substrain b'+1:word:PhtpG'
1.288242 O        b'+1:postag:VBN'
1.286562 Temp     b'lemma:\xc2\xb0c'
1.286562 Temp     b'word:\xc2\xb0C'
1.284271 Supp     b'word:Arginine'
1.281307 Med      b'lemma:m63'
1.281307 Med      b'word:M63'
1.277931 O        b'+1:lemma:43'
1.277931 O        b'+1:word:43'
1.274650 Supp     b'lemma:Trp'
1.274650 Supp     b'word:Trp'
1.272921 Gversion b'-1:lemma:nc'
1.272921 Gversion b'+1:lemma:000913'
1.272921 Gversion b'-1:word:NC'
1.272921 Gversion b'+1:word:000913'
1.271816 Med      b'lemma:medium'
1.271816 Med      b'word:medium'
1.270246 Gtype    b'-1:lemma:nsrr'
1.270246 Gtype    b'+1:lemma:flagtag'
1.270246 Gtype    b'-1:word:NsrR'
1.270246 Gtype    b'+1:word:Flagtag'
1.268743 O        b'lemma:ompr'
1.265664 Gtype    b'lemma:\xce\xb4fur'
1.265664 Gtype    b'word:\xce\x94fur'
1.256798 Gversion b'lemma:000913'
1.256798 Gversion b'word:000913'
1.256786 Agit     b'-1:lemma:250'
1.256786 Agit     b'-1:word:250'
1.253925 O        b'+1:lemma:250'
1.253925 O        b'+1:word:250'
1.252404 O        b'-1:word:ChIP-exo'
1.241007 O        b'lemma::'
1.241007 O        b'word::'
1.238954 Supp     b'+1:lemma:2'
1.238954 Supp     b'+1:word:2'
1.234867 O        b'lemma:argr'
1.234867 O        b'word:ArgR'
1.232012 Supp     b'postag:NNP'
1.222700 Supp     b'-1:lemma:with'
1.222700 Supp     b'-1:word:with'
1.216626 Med      b'lemma:media'
1.216626 Med      b'word:media'
1.215457 O        b'+1:word:ChIP-Seq'
1.213470 Technique b'word:RNA-Seq'
1.208533 Supp     b'-1:postag:CD'
1.206984 Temp     b'-1:lemma:43'
1.206984 Temp     b'-1:word:43'
1.203216 Supp     b'+1:lemma:hour'
1.201276 Phase    b'-1:lemma:until'
1.201276 Phase    b'-1:word:until'
1.201198 Air      b'-1:postag:CD'
1.200127 O        b'-1:lemma:nh4cl'
1.199343 O        b'postag:CC'
1.198734 Supp     b'-1:word:OmpR'
1.196508 O        b'lemma:purr'
1.196508 O        b'word:PurR'
1.191910 Agit     b'lemma:250'
1.191910 Agit     b'word:250'
1.190423 OD       b'lemma:od450'
1.190423 OD       b'word:OD450'
1.190423 OD       b'-1:word:At'
1.185688 Gtype    b'-1:lemma:_'
1.185688 Gtype    b'-1:word:_'
1.179158 Air      b'-1:lemma:co2'
1.179158 Air      b'-1:word:CO2'
1.176512 O        b'lemma:a'
1.176204 Med      b'lemma:glucose'
1.176204 Med      b'word:glucose'
1.174822 O        b'-1:lemma:pq'
1.174822 O        b'-1:word:PQ'
1.171205 Gtype    b'word:wt'
1.169564 Gversion b'lemma:u00096'
1.169564 Gversion b'+1:lemma:.2'
1.169564 Gversion b'word:U00096'
1.169564 Gversion b'+1:word:.2'
1.165747 O        b'+1:lemma:coli'
1.165747 O        b'+1:word:coli'
1.164443 O        b'lemma:chip'
1.163572 Supp     b'-1:lemma:ompr'
1.156072 O        b'-1:lemma:media'
1.156072 O        b'-1:word:media'
1.155349 Supp     b'+1:lemma:iptg'
1.155349 Supp     b'+1:word:IPTG'
1.155203 Temp     b'-1:lemma:\xcf\x8332'
1.155203 Temp     b'-1:word:\xcf\x8332'
1.154200 O        b'lemma:soxr'
1.154200 O        b'word:SoxR'
1.154200 O        b'lemma:soxs'
1.154200 O        b'word:SoxS'
1.153651 OD       b'-1:lemma:at'
1.153272 Gtype    b'-1:lemma:wild'
1.153272 Gtype    b'-1:word:wild'
1.149320 Supp     b'lemma:leucine'
1.149320 Supp     b'word:leucine'
1.145490 Supp     b'word:NH4CL'
1.142038 Gtype    b'lemma:wild-type'
1.141915 O        b'word:GadX'
1.141497 O        b'lemma:gadx'
1.141153 Technique b'-1:lemma:chip-exo'
1.137900 Substrain b'postag:NN'
1.136169 Technique b'+1:postag:NN'
1.135473 O        b'lemma:+'
1.135473 O        b'word:+'
1.130030 Vess     b'+1:lemma:at'
1.130030 Vess     b'+1:word:at'
1.128488 Anti     b'hGreek'
1.122241 Temp     b'-1:word:sample'
1.121971 pH       b'+1:lemma:5.5'
1.121971 pH       b'+1:word:5.5'
1.119481 Supp     b'+1:lemma:_'
1.119481 Supp     b'+1:word:_'
1.119063 O        b'lemma:or'
1.119063 O        b'word:or'
1.108013 Gtype    b'lemma:\xce\xb4cra'
1.107600 O        b'+1:lemma:0.2'
1.107600 O        b'+1:word:0.2'
1.107551 Gtype    b'-1:postag:VBP'
1.106446 Med      b'-1:lemma:LB'
1.100816 Supp     b'-1:lemma:without'
1.100816 Supp     b'-1:word:without'
1.099156 Technique b'+1:lemma:rna-seq'
1.099156 Technique b'+1:word:RNA-seq'
1.091723 Med      b'-1:lemma:in'
1.091723 Med      b'-1:word:in'
1.091394 Strain   b'-1:lemma:.'
1.091394 Strain   b'-1:postag:.'
1.091394 Strain   b'-1:word:.'
1.088029 Gtype    b'-1:lemma:from'
1.088029 Gtype    b'-1:word:from'
1.085987 Gtype    b'lemma:delta-arca'
1.085987 Gtype    b'word:delta-arcA'
1.085607 OD       b'-1:lemma:od450'
1.085607 OD       b'-1:word:OD450'
1.081454 OD       b'lemma:0.3'
1.081454 OD       b'word:0.3'
1.079850 O        b'-1:lemma:anaerobic'
1.076576 Gtype    b'postag:JJ'
1.076046 O        b'-1:lemma:genotype/variation'
1.076046 O        b'-1:word:genotype/variation'
1.075435 Gtype    b'lemma:wild'
1.075435 Gtype    b'word:wild'
1.073311 Temp     b'-1:lemma:sample'
1.071932 Supp     b'lemma:fructose'
1.071932 Supp     b'word:fructose'
1.070613 Med      b'+1:lemma:-lrb-'
1.070613 Med      b'+1:word:-LRB-'
1.062855 Med      b'+1:postag:-LRB-'
1.060841 Gtype    b'+1:lemma:_'
1.060841 Gtype    b'+1:word:_'
1.059760 Air      b'-1:postag:NN'
1.057942 Med      b'-1:lemma:fresh'
1.057942 Med      b'-1:word:fresh'
1.054833 O        b'lemma:affyexp'
1.054833 O        b'word:affyexp'
1.054762 Air      b'-1:postag::'
1.052337 pH       b'-1:postag:NN'
1.049974 O        b'-1:lemma:wt'
1.047562 Med      b'lemma:minimal'
1.047562 Med      b'word:minimal'
1.046496 O        b'lemma:~'
1.046496 O        b'word:~'
1.046365 OD       b'+1:lemma:of'
1.046365 OD       b'+1:word:of'
1.042519 O        b'lemma:harbor'
1.042519 O        b'word:harboring'
1.041440 Gtype    b'word:\xce\x94cra'
1.040618 O        b'-1:lemma:phase'
1.040618 O        b'-1:word:phase'
1.040216 OD       b'-1:postag:IN'
1.039200 Gtype    b'-1:postag:IN'
1.036050 Med      b'isUpper'
1.035836 Air      b'lemma:Anaerobic'
1.035602 Med      b'lemma:lb'
1.031423 Technique b'-1:lemma:input'
1.031423 Technique b'-1:word:Input'
1.027498 Med      b'+1:lemma:+'
1.027498 Med      b'+1:word:+'
1.023693 O        b'+1:postag:VBZ'
1.021012 O        b'-1:lemma:arginine'
1.019392 Temp     b'lemma:37'
1.019392 Temp     b'word:37'
1.016745 Gversion b'lemma:.2'
1.016745 Gversion b'-1:lemma:u00096'
1.016745 Gversion b'word:.2'
1.016745 Gversion b'-1:word:U00096'
1.015639 O        b'-1:lemma:-80'
1.015639 O        b'-1:word:-80'
1.015275 O        b'lemma:trpr'
1.015275 O        b'word:TrpR'
1.014819 O        b'-1:lemma:no3'
1.014819 O        b'-1:word:NO3'
1.014014 Gtype    b'+1:lemma:with'
1.014014 Gtype    b'+1:word:with'
1.012224 pH       b'-1:word:at'
1.011808 Anti     b'+1:lemma:antibody'
1.011808 Anti     b'+1:word:antibody'
1.011717 pH       b'-1:lemma:at'
1.011661 O        b'+1:word:reads'
1.008571 Supp     b'symb'
1.007060 O        b'+1:lemma:read'
1.006699 Technique b'+1:word:GadX'
1.006138 O        b'-1:lemma:type'
1.006138 O        b'-1:word:type'
1.005720 Technique b'+1:lemma:gadx'
1.003800 O        b'+1:lemma:fnr-8myc'
1.003800 O        b'+1:word:Fnr-8myc'
1.002659 Gtype    b'word:cra'
1.002058 O        b'lemma:s'
1.002058 O        b'word:S'
1.001328 Gtype    b'lemma:ptac'
1.001328 Gtype    b'word:Ptac'
1.000697 Anti     b'-1:lemma::'
1.000697 Anti     b'-1:word::'
0.998982 O        b'word:at'
0.997400 Anti     b'-1:lemma:fnr'
0.996733 O        b'-1:lemma:stpa'
0.996733 O        b'-1:word:stpA'
0.995949 O        b'-1:word:fnr'
0.995938 Supp     b'-1:lemma:contain'
0.995938 Supp     b'-1:word:containing'
0.995193 Gtype    b'+1:lemma:control'
0.995193 Gtype    b'+1:word:control'
0.993897 Phase    b'-1:lemma:mid-log'
0.993897 Phase    b'-1:word:mid-log'
0.991613 Supp     b'+1:word:was'
0.982860 Gtype    b'+1:lemma:cra'
0.982860 Gtype    b'+1:word:cra'
0.979484 Gtype    b'-1:lemma:rpob'
0.979484 Gtype    b'-1:word:RpoB'
0.977310 O        b'-1:lemma:\xc2\xb0c'
0.977310 O        b'-1:word:\xc2\xb0C'
0.976644 Gtype    b'-1:lemma:ptac'
0.976644 Gtype    b'-1:word:Ptac'
0.974767 pH       b'lemma:5.5'
0.974767 pH       b'word:5.5'
0.972535 Supp     b'+1:lemma:be'
0.970719 Vess     b'+1:postag:IN'
0.970214 O        b'+1:lemma:wash'
0.970077 O        b'hLower'
0.968725 Anti     b'-1:postag:JJ'
0.966414 Gtype    b'lemma:phtpg'
0.966414 Gtype    b'word:PhtpG'
0.964109 Gversion b'+1:postag:CD'
0.963683 Anti     b'lemma:anti-rpob'
0.963683 Anti     b'word:anti-RpoB'
0.962239 O        b'word:tagged'
0.961020 O        b'+1:lemma:mid-log'
0.961020 O        b'+1:word:mid-log'
0.960439 O        b'-1:lemma:acetate'
0.960439 O        b'-1:word:acetate'
0.957049 O        b'-1:lemma:nacl'
0.957049 O        b'-1:word:NaCl'
0.952848 Gversion b'+1:lemma:genome'
0.952848 Gversion b'+1:word:genome'


Top negative:
-0.108322 Temp     b'-1:word:\xc2\xb0C'
-0.108597 O        b'-1:lemma:~'
-0.108597 O        b'-1:word:~'
-0.109230 Temp     b'symb'
-0.113175 O        b'+1:lemma:media'
-0.113175 O        b'+1:word:media'
-0.113364 Gtype    b'-1:lemma:-lrb-'
-0.113364 Gtype    b'-1:word:-LRB-'
-0.113787 Anti     b'-1:postag:CD'
-0.115036 O        b'-1:lemma:final'
-0.115036 O        b'-1:word:final'
-0.115722 Vess     b'hLower'
-0.115833 O        b'-1:lemma:iptg'
-0.115833 O        b'-1:word:IPTG'
-0.117131 Supp     b'+1:lemma:glucose'
-0.117131 Supp     b'+1:word:glucose'
-0.117320 O        b'+1:lemma:-lcb-'
-0.117320 O        b'+1:word:-LCB-'
-0.118296 O        b'+1:lemma:mg1655'
-0.118296 O        b'+1:word:MG1655'
-0.120239 OD       b'lemma:='
-0.120239 OD       b'word:='
-0.122225 O        b'+1:lemma:deletion'
-0.122225 O        b'+1:word:deletion'
-0.123345 O        b'+1:lemma:.'
-0.123345 O        b'+1:postag:.'
-0.123345 O        b'+1:word:.'
-0.124391 Supp     b'-1:word:the'
-0.124966 Technique b'hGreek'
-0.125005 Gtype    b'-1:lemma:,'
-0.125005 Gtype    b'-1:postag:,'
-0.125005 Gtype    b'-1:word:,'
-0.126226 O        b'lemma:n2'
-0.126226 O        b'word:N2'
-0.126397 O        b'+1:word:Anaerobic'
-0.127207 O        b'-1:lemma:-'
-0.127207 O        b'-1:word:-'
-0.128698 Gtype    b'+1:lemma:b'
-0.128698 Gtype    b'+1:word:B'
-0.129374 pH       b'hGreek'
-0.130722 O        b'-1:lemma:pre-cleared'
-0.131716 Phase    b'isNumber'
-0.132554 O        b'-1:lemma:um'
-0.132554 O        b'+1:lemma:paraquat'
-0.132554 O        b'-1:word:uM'
-0.132554 O        b'+1:word:paraquat'
-0.133754 O        b'lemma:8'
-0.133754 O        b'word:8'
-0.134555 Supp     b'-1:lemma:-'
-0.134555 Supp     b'-1:word:-'
-0.138278 O        b'+1:lemma:delta'
-0.138278 O        b'+1:word:delta'
-0.139540 O        b'+1:lemma:mutant'
-0.140041 O        b'+1:word:purified'
-0.141150 O        b'word:fnr'
-0.141425 O        b'-1:lemma:ihf'
-0.141425 O        b'-1:word:IHF'
-0.141924 O        b'+1:word:Aerobic'
-0.142629 O        b'word:Purified'
-0.142629 O        b'-1:word:Affinity'
-0.143336 O        b'-1:lemma:affinity'
-0.144604 O        b'-1:lemma:n2'
-0.144604 O        b'-1:word:N2'
-0.147015 O        b'lemma:1m'
-0.147015 O        b'word:1M'
-0.147861 O        b'+1:lemma:fecl2'
-0.147861 O        b'+1:word:FeCl2'
-0.148201 O        b'-1:lemma:minimal'
-0.148201 O        b'-1:word:minimal'
-0.152022 O        b'-1:postag:VB'
-0.152195 O        b'+1:word:mutant'
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