********** TRAINING AND TESTING REPORT **********
Training file: training-data-set-70-NER.txt

best params:{'c1': 0.00217868466039115, 'c2': 0.005171872729007372}
best CV score:0.8211582395746769
model size: 0.11M

Flat F1: 0.811687851214172
             precision    recall  f1-score   support

         OD      1.000     1.000     1.000        21
         pH      1.000     1.000     1.000        10
  Technique      1.000     1.000     1.000        33
        Med      0.938     0.804     0.865        56
       Temp      0.857     0.800     0.828        15
       Vess      0.000     0.000     0.000         0
       Agit      0.000     0.000     0.000         7
      Phase      1.000     0.762     0.865        21
        Air      0.590     0.557     0.573        88
       Anti      0.929     1.000     0.963        13
     Strain      0.000     0.000     0.000         0
      Gtype      0.939     0.795     0.861        78
  Substrain      0.000     0.000     0.000         0
       Supp      0.864     0.838     0.851       136
   Gversion      1.000     0.500     0.667         6

avg / total      0.849     0.781     0.812       484


Top likely transitions:
Med    -> Med     6.050000
OD     -> OD      5.557586
Gtype  -> Gtype   5.439903
Anti   -> Anti    5.396354
Supp   -> Supp    5.263749
O      -> O       5.228550
Air    -> Air     5.185126
Temp   -> Temp    4.959071
Gversion -> Gversion 4.404568
Phase  -> Phase   3.565616
pH     -> pH      2.999615
Agit   -> Agit    2.988873
Technique -> Technique 2.974938
Substrain -> Gtype   1.803242
O      -> Gtype   0.964411
O      -> Technique 0.827148
Technique -> Air     0.693180
Gtype  -> Supp    0.689376
Air    -> O       0.657980
Gtype  -> pH      0.625481
Temp   -> O       0.522066
OD     -> O       0.166418
O      -> Supp    0.107052
Strain -> O       0.055996
Med    -> Strain  -0.000004
Substrain -> pH      -0.005712
Med    -> Vess    -0.008188
pH     -> Strain  -0.014920
pH     -> Substrain -0.015468
pH     -> Vess    -0.018031
Vess   -> Air     -0.020679
O      -> pH      -0.034166
OD     -> Agit    -0.045015
OD     -> Gtype   -0.048221
Strain -> Air     -0.049299
Phase  -> Vess    -0.050466
Technique -> Strain  -0.050832
Phase  -> Strain  -0.051477
Agit   -> O       -0.056027
OD     -> Anti    -0.057922
pH     -> Technique -0.060382
Air    -> Gversion -0.062172
Technique -> Substrain -0.063503
Phase  -> Substrain -0.064389
pH     -> Gversion -0.068111
pH     -> Med     -0.069558
Phase  -> Agit    -0.073217
Substrain -> Air     -0.074587
Technique -> Vess    -0.084000
Agit   -> Temp    -0.086059
OD     -> Vess    -0.094851
OD     -> pH      -0.105339
O      -> Strain  -0.111212
O      -> Vess    -0.111990
Supp   -> O       -0.114909
pH     -> O       -0.118702
Agit   -> Phase   -0.131157
Vess   -> OD      -0.136422
Gversion -> Temp    -0.137265
Strain -> OD      -0.138031
Temp   -> Gversion -0.141073
pH     -> Phase   -0.145285
Temp   -> Vess    -0.154585
Vess   -> Supp    -0.160072
Temp   -> Anti    -0.165779
Supp   -> Substrain -0.176982
Air    -> Anti    -0.177783
O      -> Phase   -0.178260
Phase  -> Gversion -0.183327
Gversion -> Med     -0.183701
Med    -> Gversion -0.185598
Temp   -> Technique -0.207029
Temp   -> pH      -0.209972
pH     -> Agit    -0.213378
Supp   -> Strain  -0.216541
Air    -> pH      -0.221229
Supp   -> Vess    -0.223219
Supp   -> Agit    -0.225432
O      -> Agit    -0.227675
Anti   -> O       -0.230492
Strain -> Supp    -0.232723
Phase  -> Air     -0.240026
Substrain -> Med     -0.240400
Substrain -> OD      -0.247960
Anti   -> Gversion -0.249802
Med    -> Anti    -0.250798
Gtype  -> Vess    -0.254169
Air    -> Gtype   -0.257550
O      -> Anti    -0.263339
O      -> Gversion -0.265293
Med    -> Agit    -0.278140
Vess   -> O       -0.294299
Substrain -> Phase   -0.299592
pH     -> Gtype   -0.301831
O      -> Substrain -0.304829
Technique -> Anti    -0.304915
Agit   -> Vess    -0.311245
Gtype  -> Temp    -0.313653
Temp   -> OD      -0.320111
Agit   -> Technique -0.324528
Technique -> Agit    -0.327090
Anti   -> pH      -0.331707
OD     -> Technique -0.345298
Gtype  -> O       -0.361521
Gversion -> OD      -0.362575
Strain -> Temp    -0.366643
Gtype  -> Air     -0.375029
Anti   -> Air     -0.375172
Gversion -> pH      -0.375388
Substrain -> Supp    -0.375569
Strain -> pH      -0.380401
Gtype  -> Strain  -0.387528
Technique -> Gversion -0.389124
pH     -> Air     -0.391120
pH     -> OD      -0.393336
Gtype  -> Substrain -0.394650
Technique -> Temp    -0.396526
pH     -> Temp    -0.398256
Gversion -> Technique -0.405964
Med    -> pH      -0.409908
Gversion -> Gtype   -0.410371
Anti   -> OD      -0.425546
Phase  -> Temp    -0.443396
Agit   -> Supp    -0.455934
Strain -> Gtype   -0.466865
Gtype  -> Agit    -0.485793
Strain -> Phase   -0.489241
Temp   -> Phase   -0.489348
Agit   -> OD      -0.491500
Med    -> Temp    -0.499774
Supp   -> pH      -0.508399
Med    -> Technique -0.511465
Anti   -> Gtype   -0.520328
Anti   -> Technique -0.579324
Gversion -> Air     -0.609370
Phase  -> Anti    -0.611795
OD     -> Med     -0.630691
Med    -> Gtype   -0.634963
O      -> Temp    -0.641291
Med    -> Phase   -0.645940
Gversion -> O       -0.655362
Supp   -> Phase   -0.664043
Technique -> O       -0.670885
Air    -> Med     -0.679706
Air    -> Technique -0.686260
Gversion -> Supp    -0.711444
Gtype  -> OD      -0.714939
Phase  -> pH      -0.741413
O      -> OD      -0.758140
Temp   -> Supp    -0.774225
Supp   -> Gversion -0.844962
O      -> Med     -0.898861
Med    -> OD      -0.908054
Temp   -> Gtype   -0.912113
Technique -> Phase   -0.931047
Supp   -> Air     -0.942597
Technique -> Med     -0.959090
OD     -> Supp    -0.983441
pH     -> Supp    -0.985219
Supp   -> Anti    -1.002110
Gtype  -> Technique -1.038060
Gtype  -> Anti    -1.069339
OD     -> Air     -1.071860
Med    -> Air     -1.077649
Gtype  -> Gversion -1.083094
Air    -> Supp    -1.099727
Phase  -> Gtype   -1.137372
Anti   -> Supp    -1.189277
Anti   -> Phase   -1.222098
Anti   -> Med     -1.262689
Supp   -> Technique -1.308018
Technique -> Supp    -1.311710
Phase  -> Technique -1.322366
Med    -> O       -1.329680
Temp   -> Air     -1.333164
OD     -> Temp    -1.366050
Gtype  -> Med     -1.381046
Anti   -> Temp    -1.402862
Supp   -> Temp    -1.438676
Phase  -> O       -1.465585
Air    -> Agit    -1.482117
Supp   -> OD      -1.500111
Agit   -> Air     -1.500114
Technique -> OD      -1.559172
Supp   -> Gtype   -1.595906
Temp   -> Med     -1.836748
Air    -> OD      -1.871587
Phase  -> OD      -2.022595
Gtype  -> Phase   -2.043585
Air    -> Temp    -2.044784
Phase  -> Supp    -2.105388
Phase  -> Med     -2.329869
Substrain -> O       -2.340683
Technique -> Gtype   -2.413477
O      -> Air     -2.431217
Supp   -> Med     -2.532849
Air    -> Phase   -2.607632
Technique -> pH      -3.038349
Med    -> Supp    -4.534295


Top unlikely transitions:
Med    -> Med     6.050000
OD     -> OD      5.557586
Gtype  -> Gtype   5.439903
Anti   -> Anti    5.396354
Supp   -> Supp    5.263749
O      -> O       5.228550
Air    -> Air     5.185126
Temp   -> Temp    4.959071
Gversion -> Gversion 4.404568
Phase  -> Phase   3.565616
pH     -> pH      2.999615
Agit   -> Agit    2.988873
Technique -> Technique 2.974938
Substrain -> Gtype   1.803242
O      -> Gtype   0.964411
O      -> Technique 0.827148
Technique -> Air     0.693180
Gtype  -> Supp    0.689376
Air    -> O       0.657980
Gtype  -> pH      0.625481
Temp   -> O       0.522066
OD     -> O       0.166418
O      -> Supp    0.107052
Strain -> O       0.055996
Med    -> Strain  -0.000004
Substrain -> pH      -0.005712
Med    -> Vess    -0.008188
pH     -> Strain  -0.014920
pH     -> Substrain -0.015468
pH     -> Vess    -0.018031
Vess   -> Air     -0.020679
O      -> pH      -0.034166
OD     -> Agit    -0.045015
OD     -> Gtype   -0.048221
Strain -> Air     -0.049299
Phase  -> Vess    -0.050466
Technique -> Strain  -0.050832
Phase  -> Strain  -0.051477
Agit   -> O       -0.056027
OD     -> Anti    -0.057922
pH     -> Technique -0.060382
Air    -> Gversion -0.062172
Technique -> Substrain -0.063503
Phase  -> Substrain -0.064389
pH     -> Gversion -0.068111
pH     -> Med     -0.069558
Phase  -> Agit    -0.073217
Substrain -> Air     -0.074587
Technique -> Vess    -0.084000
Agit   -> Temp    -0.086059
OD     -> Vess    -0.094851
OD     -> pH      -0.105339
O      -> Strain  -0.111212
O      -> Vess    -0.111990
Supp   -> O       -0.114909
pH     -> O       -0.118702
Agit   -> Phase   -0.131157
Vess   -> OD      -0.136422
Gversion -> Temp    -0.137265
Strain -> OD      -0.138031
Temp   -> Gversion -0.141073
pH     -> Phase   -0.145285
Temp   -> Vess    -0.154585
Vess   -> Supp    -0.160072
Temp   -> Anti    -0.165779
Supp   -> Substrain -0.176982
Air    -> Anti    -0.177783
O      -> Phase   -0.178260
Phase  -> Gversion -0.183327
Gversion -> Med     -0.183701
Med    -> Gversion -0.185598
Temp   -> Technique -0.207029
Temp   -> pH      -0.209972
pH     -> Agit    -0.213378
Supp   -> Strain  -0.216541
Air    -> pH      -0.221229
Supp   -> Vess    -0.223219
Supp   -> Agit    -0.225432
O      -> Agit    -0.227675
Anti   -> O       -0.230492
Strain -> Supp    -0.232723
Phase  -> Air     -0.240026
Substrain -> Med     -0.240400
Substrain -> OD      -0.247960
Anti   -> Gversion -0.249802
Med    -> Anti    -0.250798
Gtype  -> Vess    -0.254169
Air    -> Gtype   -0.257550
O      -> Anti    -0.263339
O      -> Gversion -0.265293
Med    -> Agit    -0.278140
Vess   -> O       -0.294299
Substrain -> Phase   -0.299592
pH     -> Gtype   -0.301831
O      -> Substrain -0.304829
Technique -> Anti    -0.304915
Agit   -> Vess    -0.311245
Gtype  -> Temp    -0.313653
Temp   -> OD      -0.320111
Agit   -> Technique -0.324528
Technique -> Agit    -0.327090
Anti   -> pH      -0.331707
OD     -> Technique -0.345298
Gtype  -> O       -0.361521
Gversion -> OD      -0.362575
Strain -> Temp    -0.366643
Gtype  -> Air     -0.375029
Anti   -> Air     -0.375172
Gversion -> pH      -0.375388
Substrain -> Supp    -0.375569
Strain -> pH      -0.380401
Gtype  -> Strain  -0.387528
Technique -> Gversion -0.389124
pH     -> Air     -0.391120
pH     -> OD      -0.393336
Gtype  -> Substrain -0.394650
Technique -> Temp    -0.396526
pH     -> Temp    -0.398256
Gversion -> Technique -0.405964
Med    -> pH      -0.409908
Gversion -> Gtype   -0.410371
Anti   -> OD      -0.425546
Phase  -> Temp    -0.443396
Agit   -> Supp    -0.455934
Strain -> Gtype   -0.466865
Gtype  -> Agit    -0.485793
Strain -> Phase   -0.489241
Temp   -> Phase   -0.489348
Agit   -> OD      -0.491500
Med    -> Temp    -0.499774
Supp   -> pH      -0.508399
Med    -> Technique -0.511465
Anti   -> Gtype   -0.520328
Anti   -> Technique -0.579324
Gversion -> Air     -0.609370
Phase  -> Anti    -0.611795
OD     -> Med     -0.630691
Med    -> Gtype   -0.634963
O      -> Temp    -0.641291
Med    -> Phase   -0.645940
Gversion -> O       -0.655362
Supp   -> Phase   -0.664043
Technique -> O       -0.670885
Air    -> Med     -0.679706
Air    -> Technique -0.686260
Gversion -> Supp    -0.711444
Gtype  -> OD      -0.714939
Phase  -> pH      -0.741413
O      -> OD      -0.758140
Temp   -> Supp    -0.774225
Supp   -> Gversion -0.844962
O      -> Med     -0.898861
Med    -> OD      -0.908054
Temp   -> Gtype   -0.912113
Technique -> Phase   -0.931047
Supp   -> Air     -0.942597
Technique -> Med     -0.959090
OD     -> Supp    -0.983441
pH     -> Supp    -0.985219
Supp   -> Anti    -1.002110
Gtype  -> Technique -1.038060
Gtype  -> Anti    -1.069339
OD     -> Air     -1.071860
Med    -> Air     -1.077649
Gtype  -> Gversion -1.083094
Air    -> Supp    -1.099727
Phase  -> Gtype   -1.137372
Anti   -> Supp    -1.189277
Anti   -> Phase   -1.222098
Anti   -> Med     -1.262689
Supp   -> Technique -1.308018
Technique -> Supp    -1.311710
Phase  -> Technique -1.322366
Med    -> O       -1.329680
Temp   -> Air     -1.333164
OD     -> Temp    -1.366050
Gtype  -> Med     -1.381046
Anti   -> Temp    -1.402862
Supp   -> Temp    -1.438676
Phase  -> O       -1.465585
Air    -> Agit    -1.482117
Supp   -> OD      -1.500111
Agit   -> Air     -1.500114
Technique -> OD      -1.559172
Supp   -> Gtype   -1.595906
Temp   -> Med     -1.836748
Air    -> OD      -1.871587
Phase  -> OD      -2.022595
Gtype  -> Phase   -2.043585
Air    -> Temp    -2.044784
Phase  -> Supp    -2.105388
Phase  -> Med     -2.329869
Substrain -> O       -2.340683
Technique -> Gtype   -2.413477
O      -> Air     -2.431217
Supp   -> Med     -2.532849
Air    -> Phase   -2.607632
Technique -> pH      -3.038349
Med    -> Supp    -4.534295


Top positive:
9.984330 O        b'lemma:_'
9.062207 Phase    b'lemma:stationary'
9.062207 Phase    b'lemma:exponential'
8.922058 Supp     b'lemma:Iron'
8.166405 Phase    b'lemma:mid-log'
7.815715 Air      b'lemma:anaerobic'
7.645598 Med      b'lemma:MOPS'
7.567001 O        b'lemma:Cra'
7.321517 Strain   b'lemma:k-12'
7.295223 O        b'lemma:1'
7.232563 Supp     b'lemma:pq'
6.939641 Gtype    b'lemma:wt'
6.851148 Gtype    b'lemma:\xce\xb4cra'
6.813283 Supp     b'+1:lemma:\xc2\xb5m'
6.806769 O        b'postag:VBG'
6.788226 Supp     b'lemma:2h'
6.788226 Supp     b'-1:lemma:additional'
6.765417 Technique b'lemma:ChIP-exo'
6.618194 Technique b'lemma:chipseq'
6.400925 Air      b'-1:lemma:ChIP-Seq'
6.284953 O        b'lemma:2'
6.265208 O        b'-1:lemma:0.3'
6.186639 Supp     b'lemma:acetate'
6.171061 Med      b'-1:lemma:ml'
6.148009 O        b'-1:lemma:tag'
6.049356 Gversion b'lemma:asm584v2'
6.042020 Gtype    b'lemma:arca8myc'
6.034743 Med      b'+1:lemma:2.0'
5.993930 Supp     b'-1:lemma:Cra'
5.986438 O        b'lemma:-'
5.951523 Gtype    b'lemma:\xce\xb4fur'
5.823924 O        b'lemma:b'
5.801328 O        b'lemma:3'
5.787800 Med      b'+1:lemma:0.4'
5.758229 Supp     b'lemma:glucose'
5.742260 Gtype    b'lemma:delta-fnr'
5.707560 Temp     b'-1:lemma:37'
5.705839 Med      b'lemma:LB'
5.683339 Air      b'lemma:aerobically'
5.656285 O        b'lemma:CEL'
5.568271 O        b'lemma:rep2'
5.568271 O        b'lemma:rep1'
5.567239 O        b'-1:lemma:glucose'
5.526940 Supp     b'lemma:rifampicin'
5.496511 Supp     b'lemma:no3'
5.484371 Gtype    b'lemma:delta-arca'
5.433374 Technique b'lemma:rna-seq'
5.343966 Supp     b'lemma:nh4cl'
5.333108 Substrain b'lemma:mg1655'
5.255666 Gtype    b'-1:lemma:\xe2\x88\x86'
5.255033 O        b'+1:lemma:od600'
5.191576 Gtype    b'lemma:fnr8myc'
5.117560 O        b'+1:postag:RB'
5.081485 Technique b'lemma:chip-seq'
5.007813 Supp     b'-1:lemma:+'
4.941018 Anti     b'lemma:none'
4.920198 Technique b'lemma:rnaseq'
4.905065 Supp     b'+1:lemma:Deficient'
4.898153 O        b'+1:lemma:pq'
4.896564 Supp     b'lemma:Leu'
4.875999 O        b'lemma:with'
4.828071 Air      b'lemma:anaeroibc'
4.824482 O        b'-1:lemma:lb'
4.806658 O        b'lemma:\xcf\x8332'
4.799570 Anti     b'lemma:seqa'
4.766020 Gtype    b'lemma:WT'
4.726637 O        b'lemma:rpob'
4.723417 Anti     b'lemma:\xcf\x8332'
4.711721 O        b'lemma:delta'
4.692439 O        b'-1:lemma:pq'
4.674407 O        b'lemma:argr'
4.641197 Strain   b'+1:lemma:substr'
4.610936 Supp     b'lemma:arginine'
4.602780 O        b'lemma:.'
4.602780 O        b'postag:.'
4.598412 Supp     b'-1:lemma:vol'
4.590061 Air      b'lemma:aerobic'
4.569801 Gversion b'lemma:chip-seq'
4.568944 Temp     b'-1:lemma:\xcf\x8332'
4.532811 O        b'lemma:soxr'
4.532811 O        b'lemma:soxs'
4.523487 O        b'+1:lemma:k-12'
4.508846 Supp     b'lemma:Adenine'
4.506671 O        b'-1:lemma:nh4cl'
4.505031 Gtype    b'lemma:dfnr'
4.497105 Air      b'-1:lemma:-'
4.492841 O        b'lemma:purr'
4.462669 O        b'lemma:chip-arca'
4.462148 O        b'postag::'
4.435334 Supp     b'lemma:Fe'
4.418822 Gtype    b'lemma:\xce\xb4ompr'
4.384666 O        b'lemma:ompr'
4.376742 O        b'lemma:Lrp'
4.322709 O        b'lemma:at'
4.287283 O        b'+1:lemma:43'
4.273844 O        b'-1:lemma:no3'
4.268444 Gtype    b'lemma:type'
4.267194 Supp     b'lemma:dpd'
4.264955 Vess     b'lemma:flask'
4.264955 Vess     b'-1:lemma:warm'
4.262668 OD       b'lemma:od450'
4.254888 O        b'-1:lemma:acetate'
4.227488 Gtype    b'+1:lemma:pq'
4.227310 Gtype    b'lemma:fnr-8myc'
4.218937 O        b'-1:lemma:into'
4.214559 O        b'lemma:or'
4.159293 O        b'lemma:affyexp'
4.149967 Supp     b'lemma:iptg'
4.088647 O        b'lemma:trpr'
4.086720 O        b'-1:lemma:nacl'
4.063265 O        b'+1:lemma:250'
4.059301 Gtype    b'+1:lemma:type'
4.040302 O        b'-1:lemma:arginine'
4.022920 Temp     b'lemma:37'
3.987297 O        b'lemma:oxyr'
3.983559 Air      b'lemma:Anaerobic'
3.965522 Substrain b'+1:lemma:phtpg'
3.954601 O        b'lemma:cra'
3.954545 Gtype    b'+1:lemma:ph5'
3.940360 Technique b'lemma:ChIP-Seq'
3.916571 Gtype    b'lemma:deltaseqa'
3.916571 Gtype    b'-1:lemma:old'
3.878555 O        b'postag:VBN'
3.875171 Gtype    b'lemma:\xe2\x88\x86'
3.856219 Temp     b'lemma:\xc2\xb0c'
3.831713 O        b'+1:lemma:minute'
3.810903 Substrain b'lemma:mg1655star'
3.805690 Supp     b'-1:lemma:with'
3.790663 Technique b'-1:lemma:input'
3.767681 Supp     b'lemma:Trp'
3.754657 Gtype    b'lemma:wild-type'
3.731093 Supp     b'lemma:nacl'
3.724450 O        b'lemma:a'
3.707367 O        b'+1:lemma:mid-log'
3.697874 O        b'lemma:s'
3.693405 Supp     b'-1:lemma:ompr'
3.683142 O        b'lemma:gadx'
3.676121 Temp     b'-1:lemma:43'
3.676095 Gtype    b'-1:lemma:nsrr'
3.676095 Gtype    b'+1:lemma:flagtag'
3.674804 Phase    b'-1:lemma:until'
3.662062 Technique b'+1:lemma:chip-exo'
3.641721 OD       b'-1:lemma:od450'
3.637507 O        b'lemma:Nac'
3.613996 O        b'+1:lemma:wt'
3.607039 Supp     b'+1:lemma:deficient'
3.604893 Agit     b'+1:lemma:rpm'
3.594427 Technique b'+1:lemma:gadx'
3.587571 Agit     b'lemma:rpm'
3.583201 O        b'lemma:Genome'
3.571290 Temp     b'lemma:43'
3.562033 Gtype    b'lemma:\xce\xb4oxyr'
3.554953 O        b'-1:lemma:Anaerobic'
3.554178 Gtype    b'lemma:wildtype'
3.542651 Supp     b'-1:lemma:potassium'
3.532619 O        b'lemma:chip-fnr'
3.530799 Gversion b'lemma:.2'
3.530799 Gversion b'-1:lemma:u00096'
3.522220 Gversion b'lemma:u00096'
3.522220 Gversion b'+1:lemma:.2'
3.474196 Gversion b'lemma:nc'
3.471740 O        b'lemma:chip'
3.469978 Gtype    b'lemma:pk4854'
3.446604 Gtype    b'lemma:gade-8myc'
3.446604 Gtype    b'lemma:\xce\xb4seqa'
3.445975 Gtype    b'lemma:delta-soxr'
3.445975 Gtype    b'lemma:delta-gadx'
3.445975 Gtype    b'lemma:delta-gadw'
3.445975 Gtype    b'lemma:delta-oxyr'
3.445975 Gtype    b'lemma:delta-gade'
3.445975 Gtype    b'lemma:delta-soxs'
3.444231 Technique b'lemma:chip-exo'
3.438353 O        b'lemma:for'
3.434474 Temp     b'-1:lemma:sample'
3.424495 pH       b'lemma:ph5'
3.424495 pH       b'+1:lemma:.5'
3.420755 O        b'-1:lemma:ChIP-exo'
3.416189 Supp     b'+1:lemma:1'
3.407304 O        b'lemma:lrp'
3.399730 O        b'postag:DT'
3.379981 O        b'+1:lemma:o.d.'
3.379421 O        b'lemma:pt7'
3.362727 O        b'-1:lemma:fructose'
3.332673 Supp     b'lemma:fructose'
3.328662 O        b'postag:CC'
3.324097 O        b'lemma:ntrc'
3.324097 O        b'lemma:csir'
3.312244 Gtype    b'lemma:crp'
3.284943 Gtype    b'lemma:\xce\xb4arca'
3.283748 Supp     b'-1:lemma:without'
3.280504 Gtype    b'lemma:ompr-8myc'
3.275876 O        b'lemma:culture'
3.263480 O        b'-1:lemma:induce'
3.259593 Gtype    b'+1:lemma:cra'
3.256813 Supp     b'lemma:leucine'
3.251337 Gtype    b'lemma:\xce\xb4soxs'
3.245115 O        b'-1:lemma:min'
3.237057 Supp     b'+1:lemma:leucine'
3.236767 O        b'-1:lemma:anaerobic'
3.234203 Med      b'-1:lemma:fresh'
3.215283 Supp     b'+1:lemma:iptg'
3.206744 Med      b'lemma:m63'
3.171599 Gtype    b'lemma:\xce\xb4soxr'
3.154530 O        b'lemma:input'
3.154530 O        b'+1:lemma:chip-seq'
3.153859 O        b'lemma:2-3'
3.129396 O        b'-1:lemma:genotype/variation'
3.127895 O        b'lemma:C'
3.119016 pH       b'lemma:5.5'
3.118991 O        b'+1:lemma:30'
3.117665 O        b'lemma:c'
3.093263 Gversion b'lemma:000913'
3.088217 Gtype    b'-1:lemma:ptac'
3.052173 Gtype    b'lemma:ptac'
3.011998 O        b'-1:lemma:shake'
3.009910 pH       b'+1:lemma:5.5'
3.004479 Gtype    b'lemma:purr-8myc'
2.993487 O        b'-1:postag:NNS'
2.989563 Anti     b'+1:lemma:antibody'
2.987990 O        b'+1:lemma:coli'
2.967361 O        b'lemma:A'
2.966664 Gtype    b'lemma:phtpg'
2.964584 Supp     b'+1:lemma:2'
2.950307 Anti     b'-1:lemma:fnr'
2.949758 O        b'-1:lemma:stpa'
2.929720 O        b'-1:lemma:type'
2.926881 Anti     b'lemma:anti-myc'
2.922975 O        b'+1:lemma:um'
2.913262 OD       b'lemma:0.3-0.35'
2.913162 Gversion b'-1:lemma:nc'
2.913162 Gversion b'+1:lemma:000913'
2.910499 Air      b'postag:RB'
2.896440 O        b'-1:lemma:tryptophan'
2.889025 Med      b'lemma:media'
2.888747 Supp     b'-1:lemma:final'
2.878253 O        b'-1:lemma:leucine'
2.878213 O        b'-1:lemma:0.3-0.35'
2.872228 Anti     b'lemma:anti-rpos'
2.871235 Supp     b'+1:lemma:_'
2.863408 Gtype    b'lemma:flagtag'
2.859421 Agit     b'-1:lemma:250'
2.850299 Agit     b'lemma:250'
2.846032 Gversion b'lemma:_'
2.839899 Technique b'+1:lemma:rna-seq'
2.821559 Anti     b'lemma:anti-rpob'
2.821152 pH       b'-1:lemma:ph'
2.818970 O        b'-1:lemma:Aerobic'
2.807026 O        b'+1:lemma:ph5'
2.794943 Technique b'-1:lemma:rna-seq'
2.786171 Med      b'lemma:lb'
2.782562 O        b'postag:IN'
2.781217 Med      b'postag:NNP'
2.780174 O        b'lemma:genotype'
2.766327 Air      b'-1:lemma:ryhb'
2.745244 O        b'lemma:\xcb\x9ac'
2.739053 Gtype    b'-1:lemma:phtpg'
2.737529 O        b'lemma:one'
2.736648 O        b'postag:SYM'
2.733928 O        b'lemma:Fur'
2.728554 O        b'lemma:genotype/variation'
2.721320 Supp     b'-1:lemma:respiration'
2.721320 Supp     b'+1:lemma:mmol'
2.713119 Gtype    b'+1:lemma:with'
2.710675 Supp     b'+1:lemma:mm'
2.699724 O        b'lemma:growth'
2.692410 pH       b'lemma:.5'
2.692410 pH       b'-1:lemma:ph5'
2.690653 O        b'+1:lemma:sparging'
2.679626 Supp     b'+1:lemma:hour'
2.675156 Vess     b'-1:postag:VBN'
2.669958 O        b'-1:lemma:\xc2\xb0c'
2.654663 Gtype    b'-1:lemma:rpob'
2.646676 O        b'lemma:ecolus'
2.642251 Technique b'-1:lemma:IP'
2.641525 Gtype    b'lemma:lrp-8myc'
2.638363 O        b'+1:lemma:wash'
2.632869 O        b'lemma:until'
2.621432 Gtype    b'-1:lemma:Fur'
2.619634 Supp     b'-1:lemma:sodium'
2.618604 Gtype    b'-1:lemma:from'
2.618463 Med      b'+1:lemma:g/l'
2.603415 Technique b'-1:lemma:chip-exo'
2.600277 O        b'-1:lemma:.5'
2.596009 Gtype    b'lemma:fur-8myc'
2.596009 Gtype    b'lemma:cra-8myc-tagged'
2.593660 Supp     b'lemma:tryptophan'
2.593660 Supp     b'-1:lemma:mg/l'
2.563348 O        b'-1:lemma:medium'
2.558912 Med      b'-1:postag:JJ'
2.542499 Supp     b'-1:lemma:2'
2.533870 Med      b'-1:lemma:LB'
2.528494 Supp     b'-1:lemma:\xce\xb4cra'
2.527517 Temp     b'+1:lemma:short'
2.524488 O        b'+1:lemma:37'
2.501773 Air      b'-1:lemma:cm20'
2.497574 Gtype    b'-1:lemma:wild'
2.494099 Gtype    b'-1:lemma:_'
2.486065 O        b'-1:lemma:rpm'
2.474822 O        b'-1:lemma:one'
2.467655 O        b'-1:lemma:l1'
2.466914 O        b'-1:lemma:5.5'
2.466779 O        b'lemma:harbor'
2.444479 O        b'+1:lemma:fnr-8myc'
2.442269 Supp     b'+1:postag:NNS'
2.439290 Supp     b'lemma:glutamine'
2.439290 Supp     b'-1:lemma:2g/l'
2.438754 Air      b'-1:lemma:_'
2.432657 Air      b'lemma:Aerobic'
2.425135 Air      b'-1:postag:-RRB-'
2.424380 Air      b'-1:lemma:-rrb-'
2.412070 pH       b'+1:postag:CD'
2.411369 Gtype    b'-1:lemma:knock-out'
2.410933 O        b'-1:lemma:-80'
2.409498 Gtype    b'lemma:oxyr-8myc'
2.409498 Gtype    b'lemma:soxr-8myc'
2.409498 Gtype    b'lemma:soxs-8myc'
2.401492 Med      b'+1:lemma:-lrb-'
2.385666 Air      b'+1:lemma:b'
2.368349 Med      b'+1:postag:-LRB-'
2.348845 Phase    b'postag:NN'
2.346688 Air      b'postag:JJ'
2.337794 O        b'lemma:ml'
2.321494 Gtype    b'lemma:wild'
2.319164 Supp     b'-1:lemma:30'
2.317828 Gtype    b'lemma:nsrr'
2.288713 O        b'-1:lemma:wt'
2.283690 Supp     b'-1:lemma:m'
2.278907 Gtype    b'-1:lemma:delta'
2.275706 Technique b'lemma:ChIPSeq'
2.273922 O        b'+1:lemma:20'
2.270650 Med      b'+1:postag:CD'
2.270095 Gtype    b'-1:lemma:factor'
2.266913 O        b'+1:lemma:\xe2\x88\x86'
2.263379 Vess     b'+1:lemma:at'
2.257151 Gtype    b'-1:lemma:lacz'
2.256536 Gversion b'+1:lemma:genome'
2.251049 Supp     b'-1:lemma::'
2.245501 Med      b'+1:lemma:+'
2.240084 O        b'-1:lemma:dpd'
2.233519 O        b'+1:lemma::'
2.223395 O        b'-1:lemma:genotype'
2.216508 O        b'+1:lemma:dpd'
2.210053 OD       b'lemma:o.d.'
2.210053 OD       b'+1:lemma:600nm'
2.200452 Gtype    b'lemma:\xce\xb4gadw'
2.200452 Gtype    b'lemma:\xce\xb4gadx'
2.194765 Gtype    b'lemma:\xce\xb4gade'
2.189689 O        b'lemma:escherichia'
2.175393 O        b'-1:lemma:aerobic'
2.173295 Air      b'-1:lemma:co2'
2.170285 O        b'lemma:antibody'
2.166349 Gtype    b'+1:lemma:the'
2.160063 Technique b'postag:NNP'
2.145551 O        b'-1:lemma:4'
2.138465 Supp     b'+1:lemma:min'
2.136898 O        b'lemma:agitation'
2.132972 Substrain b'-1:lemma:.'
2.132972 Substrain b'-1:postag:.'
2.123265 Gtype    b'+1:postag::'
2.122327 Gtype    b'-1:postag:VBP'
2.121561 pH       b'-1:lemma:at'
2.117987 Anti     b'+1:lemma:from'
2.112456 Phase    b'-1:lemma:mid-log'
2.104534 Supp     b'lemma:1'
2.089450 Air      b'+1:lemma:C'
2.078989 Gtype    b'+1:lemma:hn'
2.078710 Air      b'-1:lemma:phase'
2.077930 Phase    b'lemma:phase'
2.073020 Supp     b'+1:lemma:1/100'
2.067028 OD       b'lemma:0.3'
2.049863 Supp     b'-1:lemma:cra'
2.047570 O        b'+1:lemma:cell'
2.036860 Gtype    b'+1:lemma:_'
2.035066 O        b'+1:lemma:\xcb\x9ac'
2.025378 O        b'+1:lemma:od450'
2.019886 OD       b'-1:lemma:at'
2.019052 Supp     b'-1:lemma:_'
2.015508 O        b'lemma:IP'
2.009551 Supp     b'lemma:cm20'
2.009551 Supp     b'-1:lemma:\xc2\xb5l'
2.005663 Supp     b'+1:lemma:anaerobically'
2.004764 pH       b'lemma:ph'
2.003407 O        b'-1:lemma:0.35'
1.978352 O        b'+1:lemma:aerobically'
1.975882 OD       b'+1:lemma:0.3-0.35'
1.975866 O        b'+1:postag:NNP'
1.970992 Temp     b'+1:lemma:\xc2\xb0c'
1.968030 Gtype    b'lemma:the'
1.961703 O        b'-1:lemma:.2'
1.960908 Med      b'lemma:medium'
1.960439 O        b'+1:lemma:ChIP-Seq'
1.957943 Supp     b'lemma:2g/l'
1.957943 Supp     b'+1:lemma:glutamine'
1.951841 O        b'+1:lemma:acetate'
1.950934 O        b'-1:lemma:mg1655'
1.944267 Anti     b'-1:lemma:monoclonal'
1.938835 Supp     b'-1:lemma:contain'
1.938759 Med      b'-1:lemma:in'
1.922156 Air      b'-1:postag:NN'
1.915205 O        b'+1:lemma:nacl'
1.911025 Anti     b'-1:lemma:myc'
1.904035 Supp     b'lemma:nitrate'
1.902562 Gtype    b'-1:postag:VBG'
1.901702 Supp     b'+1:lemma:m'
1.898732 Supp     b'lemma:1m'
1.891043 Anti     b'lemma:tag'
1.890806 Supp     b'-1:lemma:mm'
1.882182 O        b'lemma:+'
1.879161 O        b'lemma:additional'
1.879161 O        b'+1:lemma:2h'
1.877745 Supp     b'-1:lemma:phosphate'
1.876896 Air      b'-1:postag::'
1.873820 Temp     b'+1:lemma:and'
1.871775 Technique b'-1:lemma:1'
1.868745 Strain   b'-1:lemma:.'
1.868745 Strain   b'-1:postag:.'
1.864349 Gtype    b'+1:lemma:fur'
1.861593 Med      b'-1:lemma:glucose'
1.845753 Air      b'+1:lemma:-'
1.843366 Gtype    b'lemma::'
1.835841 O        b'-1:lemma:Leu'
1.831948 O        b'-1:lemma:Adenine'
1.831913 O        b'-1:lemma:after'
1.830104 Gtype    b'postag:SYM'
1.828958 Technique b'-1:lemma:_'
1.824197 O        b'-1:lemma:concentration'
1.824197 O        b'+1:lemma:150'
1.822412 Supp     b'lemma:min'
1.820882 O        b'-1:lemma:phase'
1.818481 O        b'-1:lemma:genbank'
1.816751 Supp     b'-1:lemma:soxr'
1.816751 Supp     b'-1:lemma:soxs'
1.816738 Supp     b'-1:lemma:\xce\xb4ompr'
1.816437 O        b'+1:lemma:old'
1.809740 OD       b'-1:lemma:about'
1.800859 O        b'lemma:respiration'
1.797019 OD       b'-1:lemma:600nm'
1.796678 Med      b'-1:lemma:w2'
1.778751 Supp     b'lemma:final'
1.765655 O        b'lemma:-80'
1.762287 Temp     b'lemma:sample'
1.740441 O        b'lemma::'
1.739194 O        b'+1:lemma:read'
1.736499 Technique b'+1:lemma:Anaerobic'
1.734320 O        b'+1:lemma:b1'
1.718311 OD       b'+1:postag:IN'
1.716757 Supp     b'lemma:sodium'
1.715829 OD       b'+1:lemma:,'
1.715829 OD       b'+1:postag:,'
1.713981 Temp     b'+1:lemma:.'
1.713981 Temp     b'+1:postag:.'
1.711927 Air      b'+1:lemma:at'
1.709993 O        b'-1:lemma:grow'
1.709836 O        b'+1:lemma:treat'
1.703334 O        b'+1:lemma:to'
1.703334 O        b'+1:postag:TO'
1.699902 O        b'+1:postag:VBZ'
1.694788 Gtype    b'+1:lemma:control'
1.691350 Supp     b'lemma:30'
1.686575 O        b'lemma:minute'
1.681587 O        b'lemma:seqa'
1.680467 Supp     b'+1:lemma:and'
1.679286 O        b'lemma:treatment'
1.678982 Supp     b'+1:lemma:\xc2\xb5l'
1.673316 Gtype    b'-1:lemma:Wild'
1.673090 Med      b'lemma:glucose'
1.667890 Med      b'+1:lemma:minimal'
1.666961 O        b'+1:lemma:m9'
1.658910 O        b'lemma:600'
1.656855 O        b'lemma:EB'
1.654564 O        b'-1:lemma:2-3'
1.653235 Supp     b'-1:lemma:1g/l'
1.625976 O        b'lemma:-lrb-'
1.625436 Gtype    b'lemma:ryhb'
1.619715 Supp     b'lemma:m'
1.606531 Supp     b'-1:postag:IN'
1.601178 O        b'lemma:cell'
1.595511 O        b'lemma:to'
1.595511 O        b'postag:TO'
1.594500 OD       b'lemma:600nm'
1.594500 OD       b'-1:lemma:o.d.'
1.593552 O        b'postag:JJ'
1.590783 Gtype    b'lemma:knock-out'
1.587117 O        b'-1:postag:NNP'
1.577469 O        b'+1:lemma:0.2'
1.574538 O        b'lemma:fnr'
1.568307 O        b'-1:lemma:wp009'
1.566857 Supp     b'-1:lemma:\xc2\xb5m'
1.564986 O        b'+1:lemma:b2'
1.564724 Temp     b'+1:postag:CC'
1.564356 Gtype    b'+1:lemma:fructose'
1.561480 Anti     b'-1:lemma::'
1.558893 O        b'lemma:induction'
1.558009 Gtype    b'+1:lemma:knock-out'
1.555029 O        b'-1:lemma:w0002'
1.535158 Gtype    b'-1:lemma:vector'
1.533312 Temp     b'+1:lemma:see'
1.524069 OD       b'-1:postag:IN'
1.522580 O        b'lemma:fresh'
1.520533 Supp     b'+1:lemma:phosphate'


Top negative:
0.096842 Anti     b'lemma:anti-fur'
0.095031 O        b'+1:lemma:solution'
0.094959 O        b'lemma:phase'
0.094434 O        b'+1:lemma:ompr'
0.094271 O        b'lemma:hour'
0.092176 Gtype    b'-1:lemma:lacx74/ptg2'
0.092027 O        b'+1:lemma:neg'
0.090174 O        b'+1:lemma:glucose'
0.089485 O        b'lemma:voluman'
0.088405 O        b'+1:lemma:the'
0.088195 O        b'lemma:source'
0.088004 O        b'lemma:warm'
0.088004 O        b'-1:lemma:pre'
0.088004 O        b'+1:lemma:flask'
0.087388 O        b'lemma:keep'
0.087388 O        b'-1:lemma:remainder'
0.087328 Med      b'+1:postag:-RRB-'
0.087307 O        b'lemma:treat'
0.087115 O        b'lemma:3500'
0.086938 O        b'lemma:sds'
0.084827 Gtype    b'-1:lemma:control'
0.084523 Supp     b'+1:lemma:final'
0.083379 Supp     b'+1:postag:IN'
0.083018 O        b'lemma:back'
0.083018 O        b'+1:lemma:1:500'
0.081989 Supp     b'lemma:10'
0.080959 Air      b'lemma:-lrb-'
0.080937 Anti     b'postag:NN'
0.078864 O        b'+1:lemma:align'
0.077283 O        b'-1:lemma:m9'
0.077209 O        b'-1:lemma:methanol'
0.076994 O        b'+1:lemma:location'
0.076585 Med      b'-1:lemma:g/l'
0.076537 O        b'-1:lemma:no'
0.075043 O        b'+1:lemma:-'
0.074900 O        b'+1:lemma:dissolve'
0.074123 Gtype    b'lemma:carrying'
0.074123 Gtype    b'+1:lemma:inducible'
0.073908 Gtype    b'lemma:tonb'
0.072523 O        b'-1:lemma:licl'
0.070964 O        b'postag:-LRB-'
0.068814 O        b'lemma:vol'
0.068814 O        b'-1:lemma:1/100'
0.068670 O        b'lemma:rrna'
0.068524 O        b'-1:lemma:ten'
0.065919 Gversion b'-1:postag:CD'
0.064885 Phase    b'+1:postag:NN'
0.062855 Supp     b'-1:lemma:%'
0.060773 O        b'+1:lemma:0.1'
0.059954 O        b'-1:lemma:25'
0.059269 Strain   b'+1:postag:NN'
0.058740 Air      b'-1:lemma:aerobically'
0.058460 O        b'-1:lemma:tritonx-100'
0.058186 O        b'lemma:total'
0.056516 O        b'lemma:its'
0.056516 O        b'postag:PRP$'
0.056516 O        b'+1:lemma:derivative'
0.055850 Gtype    b'+1:lemma:acetate'
0.054083 O        b'+1:lemma:\xce\xbcm'
0.054054 O        b'lemma:output'
0.053781 O        b'lemma:derivative'
0.053781 O        b'-1:lemma:its'
0.053781 O        b'-1:postag:PRP$'
0.053451 O        b'+1:lemma:more'
0.053451 O        b'+1:postag:JJR'
0.052781 Gtype    b'+1:lemma:pk4854'
0.051857 O        b'-1:lemma:either'
0.051572 Gtype    b'postag:VBP'
0.051352 O        b'-1:lemma:gene'
0.051138 Gtype    b'+1:postag:VBP'
0.050338 Air      b'+1:lemma:culture'
0.048566 O        b'-1:lemma:protein-dna'
0.048431 O        b'lemma:95'
0.047205 O        b'+1:lemma:for'
0.047057 O        b'-1:postag:VBG'
0.046635 O        b'-1:lemma:Tris'
0.046177 O        b'lemma:lysate'
0.045470 Air      b'+1:postag:CD'
0.045288 Temp     b'+1:postag:-LRB-'
0.044960 Air      b'postag:CC'
0.041905 O        b'lemma:-lsb-'
0.041700 O        b'lemma:Keseler'
0.040170 O        b'lemma:FDR'
0.039435 O        b'-1:lemma:treat'
0.038797 O        b'lemma:twice'
0.036731 O        b'+1:lemma:agitation'
0.033480 Supp     b'lemma:250'
0.033003 O        b'lemma:volume'
0.031141 Agit     b'+1:postag:NN'
0.030806 Air      b'-1:lemma:-lrb-'
0.029552 O        b'lemma:period'
0.028879 O        b'lemma:constant'
0.027790 O        b'+1:lemma:l1'
0.027564 O        b'+1:lemma:NeoClone'
0.027344 O        b'-1:lemma:cra'
0.026582 O        b'+1:lemma:edta'
0.026170 O        b'+1:lemma:asm584v2'
0.025177 O        b'lemma:neg'
0.024508 O        b'+1:lemma:escherichia'
0.023442 O        b'-1:lemma:neg'
0.023303 O        b'-1:lemma:20'
0.023225 O        b'lemma:Hardcastle'
0.023225 O        b'+1:lemma:&'
0.022796 O        b'+1:postag:FW'
0.022406 O        b'-1:lemma:TEX'
0.021144 O        b'+1:lemma:.'
0.021144 O        b'+1:postag:.'
0.020306 Gtype    b'+1:postag:NNP'
0.020203 pH       b'-1:lemma:\xce\xb4gade'
0.019672 pH       b'-1:lemma:\xce\xb4gadw'
0.019672 pH       b'-1:lemma:\xce\xb4gadx'
0.019566 O        b'lemma:6'
0.018589 O        b'lemma:TEX'
0.017998 Med      b'-1:postag:CC'
0.017323 O        b'+1:lemma:acid'
0.015770 O        b'+1:lemma:hs2'
0.014347 O        b'lemma:0.4'
0.013345 Gtype    b'lemma:rpoh'
0.013123 Gtype    b'+1:lemma:carrying'
0.012812 O        b'lemma:5'
0.012564 Air      b'-1:postag:-LRB-'
0.011540 O        b'+1:lemma:TEX'
0.010766 Supp     b'-1:lemma:10'
0.010587 O        b'-1:lemma:wild-type'
0.010334 O        b'-1:lemma:FDR'
0.010334 O        b'+1:lemma:0.01'
0.010292 Technique b'+1:postag:-RRB-'
0.009989 O        b'-1:lemma:subsequently'
0.008901 O        b'+1:lemma:inoculate'
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