********** TRAINING AND TESTING REPORT **********
Training file: training-data-set-70-NER.txt

best params:{'c1': 0.08751858459388541, 'c2': 0.007966991599565517}
best CV score:0.8438553480543364
model size: 0.14M

Flat F1: 0.8234506002346681
             precision    recall  f1-score   support

         OD      1.000     1.000     1.000        21
         pH      1.000     1.000     1.000        10
  Technique      1.000     1.000     1.000        33
        Med      1.000     0.821     0.902        56
       Temp      1.000     0.800     0.889        15
       Vess      0.000     0.000     0.000         0
       Agit      0.000     0.000     0.000         7
      Phase      1.000     0.762     0.865        21
        Air      0.605     0.591     0.598        88
       Anti      0.929     1.000     0.963        13
     Strain      0.000     0.000     0.000         0
      Gtype      0.913     0.808     0.857        78
  Substrain      0.000     0.000     0.000         0
       Supp      0.877     0.838     0.857       136
   Gversion      1.000     0.500     0.667         6

avg / total      0.863     0.791     0.823       484


Top likely transitions:
Temp   -> Temp    6.588759
Anti   -> Anti    6.438088
Phase  -> Phase   5.991719
Med    -> Med     5.976056
Gversion -> Gversion 5.387480
OD     -> OD      4.761792
Technique -> Technique 4.661878
Gtype  -> Gtype   4.383052
Supp   -> Supp    4.100218
pH     -> pH      4.021039
Air    -> Air     3.465669
Agit   -> Agit    3.166679
O      -> O       2.755012
Substrain -> Gtype   1.116852
Technique -> Air     0.845165
O      -> Technique 0.559805
Gtype  -> Supp    0.135233
Temp   -> O       0.015670
Gtype  -> pH      0.000401
Vess   -> O       -0.000062
Agit   -> O       -0.000095
O      -> Gversion -0.001096
Technique -> O       -0.011404
Agit   -> Air     -0.036468
Supp   -> Air     -0.046009
Gversion -> O       -0.049317
Supp   -> Gtype   -0.111746
Air    -> Gtype   -0.122473
O      -> Phase   -0.239512
Phase  -> Supp    -0.245319
Technique -> pH      -0.248394
OD     -> Air     -0.293192
Air    -> O       -0.316898
Phase  -> O       -0.321493
Phase  -> OD      -0.373684
O      -> Temp    -0.411190
O      -> Supp    -0.559059
O      -> Med     -0.571255
Air    -> Supp    -0.576594
O      -> Anti    -0.611466
Med    -> O       -0.616025
OD     -> Supp    -0.620826
Supp   -> Med     -0.630436
O      -> OD      -0.723970
Supp   -> O       -1.100103
Technique -> Gtype   -1.459893
OD     -> O       -1.749190
Substrain -> O       -1.810001
Med    -> Supp    -1.967905
Gtype  -> O       -2.010094
O      -> Air     -2.639397


Top unlikely transitions:
Temp   -> Temp    6.588759
Anti   -> Anti    6.438088
Phase  -> Phase   5.991719
Med    -> Med     5.976056
Gversion -> Gversion 5.387480
OD     -> OD      4.761792
Technique -> Technique 4.661878
Gtype  -> Gtype   4.383052
Supp   -> Supp    4.100218
pH     -> pH      4.021039
Air    -> Air     3.465669
Agit   -> Agit    3.166679
O      -> O       2.755012
Substrain -> Gtype   1.116852
Technique -> Air     0.845165
O      -> Technique 0.559805
Gtype  -> Supp    0.135233
Temp   -> O       0.015670
Gtype  -> pH      0.000401
Vess   -> O       -0.000062
Agit   -> O       -0.000095
O      -> Gversion -0.001096
Technique -> O       -0.011404
Agit   -> Air     -0.036468
Supp   -> Air     -0.046009
Gversion -> O       -0.049317
Supp   -> Gtype   -0.111746
Air    -> Gtype   -0.122473
O      -> Phase   -0.239512
Phase  -> Supp    -0.245319
Technique -> pH      -0.248394
OD     -> Air     -0.293192
Air    -> O       -0.316898
Phase  -> O       -0.321493
Phase  -> OD      -0.373684
O      -> Temp    -0.411190
O      -> Supp    -0.559059
O      -> Med     -0.571255
Air    -> Supp    -0.576594
O      -> Anti    -0.611466
Med    -> O       -0.616025
OD     -> Supp    -0.620826
Supp   -> Med     -0.630436
O      -> OD      -0.723970
Supp   -> O       -1.100103
Technique -> Gtype   -1.459893
OD     -> O       -1.749190
Substrain -> O       -1.810001
Med    -> Supp    -1.967905
Gtype  -> O       -2.010094
O      -> Air     -2.639397


Top positive:
6.598155 Anti     b'-2:lemma:antibody'
5.420805 O        b'-2:lemma:_'
4.996798 Phase    b'-2:lemma:phase'
4.736521 Air      b'lemma:anaerobic'
4.609209 Gtype    b'-2:lemma:genotype/variation'
4.518191 Air      b'word:Aerobic'
4.267248 Technique b'word:ChIP-exo'
4.132917 O        b'postag:VBG'
4.054641 Supp     b'lemma:nh4cl'
3.916727 Gtype    b'lemma:type'
3.916727 Gtype    b'word:type'
3.890309 Gtype    b'-2:lemma:affyexp'
3.841490 O        b'+2:lemma:\xc2\xb0c'
3.820490 O        b'word:Cra'
3.811677 Technique b'word:ChIP-Seq'
3.746921 Technique b'word:ChIPSeq'
3.698012 Gtype    b'word:WT'
3.645576 Supp     b'-2:lemma:shake'
3.626802 Technique b'lemma:rna-seq'
3.580778 O        b'lemma:_'
3.580778 O        b'word:_'
3.496433 Med      b'word:LB'
3.492126 Technique b'+2:lemma:ph5'
3.435778 O        b'-1:lemma:lb'
3.409788 Gtype    b'-2:lemma:genotype'
3.321459 Supp     b'lemma:pq'
3.321459 Supp     b'word:PQ'
3.305580 O        b'lemma:-'
3.305580 O        b'word:-'
3.289297 Air      b'word:Anaerobic'
3.251266 O        b'lemma:1'
3.251266 O        b'word:1'
3.199090 Supp     b'lemma:no3'
3.199090 Supp     b'word:NO3'
3.024666 O        b'lemma:2'
3.024666 O        b'word:2'
3.005254 Gtype    b'lemma:wt'
2.989249 Air      b'postag:RB'
2.910059 O        b'lemma:3'
2.910059 O        b'word:3'
2.907142 Technique b'lemma:chipseq'
2.846548 O        b'+1:postag:RB'
2.823486 Gtype    b'-1:ner:GEN'
2.786514 O        b'word:A'
2.786276 Gtype    b'+1:lemma:type'
2.786276 Gtype    b'+1:word:type'
2.777153 Phase    b'lemma:mid-log'
2.777153 Phase    b'word:mid-log'
2.770833 Gtype    b'lemma:\xce\xb4fur'
2.770833 Gtype    b'word:\xce\x94fur'
2.738514 Strain   b'lemma:k-12'
2.738514 Strain   b'word:K-12'
2.704538 O        b'-2:lemma:flagtag'
2.682533 Supp     b'-2:lemma:media'
2.671488 Supp     b'-1:ner:SUPP'
2.666312 Gtype    b'lemma:\xce\xb4cra'
2.662772 Med      b'lemma:MOPS'
2.662772 Med      b'word:MOPS'
2.648986 Supp     b'+2:lemma:iptg'
2.632839 Gtype    b'word:\xce\x94cra'
2.626783 O        b'+2:lemma:crp'
2.610551 Supp     b'lemma:arginine'
2.549860 Supp     b'lemma:Iron'
2.549860 Supp     b'word:Iron'
2.549860 Supp     b'+1:word:Deficient'
2.549860 Supp     b'-2:lemma:Anaerobic'
2.540949 Supp     b'+1:lemma:\xc2\xb5m'
2.540949 Supp     b'+1:word:\xc2\xb5M'
2.536014 O        b'lemma:with'
2.536014 O        b'word:with'
2.514021 O        b'-1:postag:NNS'
2.483463 O        b'lemma:.'
2.483463 O        b'postag:.'
2.483463 O        b'word:.'
2.463581 O        b'+1:word:ChIP-Seq'
2.462113 O        b'lemma:b'
2.462113 O        b'word:B'
2.450021 Supp     b'+2:lemma:rifampicin'
2.441375 Substrain b'-2:lemma:substr'
2.407623 Air      b'-1:lemma:ChIP-Seq'
2.407623 Air      b'-1:word:ChIP-Seq'
2.386190 Supp     b'lemma:2h'
2.386190 Supp     b'-1:lemma:additional'
2.386190 Supp     b'word:2h'
2.386190 Supp     b'-1:word:additional'
2.382644 Air      b'-2:lemma:IP'
2.367688 O        b'-1:lemma:tag'
2.318019 O        b'lemma:at'
2.309828 Phase    b'+2:lemma:o.d.'
2.289583 O        b'lemma:rpob'
2.289583 O        b'word:RpoB'
2.233941 O        b'+1:ner:MED'
2.233194 Supp     b'-1:word:Cra'
2.221060 O        b'-2:lemma:myc'
2.196717 O        b'-1:lemma:ChIP-exo'
2.195519 Gtype    b'lemma:wild-type'
2.188428 O        b'postag::'
2.155352 O        b'-2:lemma:='
2.146848 O        b'-2:lemma:medium'
2.144494 Air      b'postag:JJ'
2.134605 O        b'-1:word:tag'
2.125014 Med      b'+2:lemma:b2'
2.116338 Gtype    b'postag:JJ'
2.090075 O        b'-2:lemma:fructose'
2.073434 Supp     b'lemma:iptg'
2.073434 Supp     b'word:IPTG'
2.038437 O        b'lemma:culture'
2.009622 Supp     b'+1:word:was'
2.003147 Technique b'-1:lemma:chip-exo'
2.000258 Air      b'lemma:aerobically'
2.000258 Air      b'word:aerobically'
1.976593 O        b'lemma:for'
1.965751 Gtype    b'lemma:\xce\xb4ompr'
1.965751 Gtype    b'word:\xce\x94ompR'
1.953830 O        b'word:Lrp'
1.948437 Air      b'lemma:aerobic'
1.930719 O        b'word:OmpR'
1.924171 O        b'postag:IN'
1.919819 O        b'-1:word:Aerobic'
1.918874 Substrain b'lemma:mg1655'
1.918874 Substrain b'word:MG1655'
1.911656 Gtype    b'-2:lemma:delta'
1.907151 Gversion b'lemma:chip-seq'
1.905570 Med      b'+2:postag:CC'
1.904840 O        b'lemma:ompr'
1.853115 Gtype    b'lemma:pk4854'
1.853115 Gtype    b'word:PK4854'
1.851863 O        b'lemma:gadx'
1.841007 O        b'-2:lemma:overnight'
1.839720 pH       b'+1:postag:CD'
1.826785 Supp     b'-2:lemma:agent'
1.800408 Air      b'-1:lemma:-'
1.800408 Air      b'-1:word:-'
1.800374 Air      b'-2:lemma:cm20'
1.796744 Temp     b'-1:word:sample'
1.795141 Air      b'-1:lemma:co2'
1.795141 Air      b'-1:word:CO2'
1.788484 Supp     b'-1:lemma:Cra'
1.785784 Gversion b'word:ChIP-Seq'
1.783990 Supp     b'-2:postag:VBG'
1.757972 Temp     b'-1:lemma:sample'
1.743833 Gtype    b'lemma:dfnr'
1.743833 Gtype    b'word:dFNR'
1.737663 Temp     b'+1:lemma:\xc2\xb0c'
1.737663 Temp     b'+1:word:\xc2\xb0C'
1.732473 Med      b'+2:lemma:b1'
1.728186 Supp     b'lemma:acetate'
1.728186 Supp     b'word:acetate'
1.715149 O        b'-1:word:Anaerobic'
1.705867 Technique b'lemma:rnaseq'
1.705867 Technique b'word:RNASeq'
1.688880 Gtype    b'lemma:\xe2\x88\x86'
1.688880 Gtype    b'word:\xe2\x88\x86'
1.663837 Technique b'-2:lemma:wt'
1.662236 Gtype    b'+1:lemma:ph5'
1.662236 Gtype    b'+1:word:pH5'
1.662236 Gtype    b'+2:lemma:.5'
1.661013 Supp     b'-2:lemma:20'
1.658166 Med      b'+2:lemma:+'
1.648598 Med      b'-2:postag:JJ'
1.643591 O        b'+1:postag:NNP'
1.636766 Supp     b'-1:lemma:+'
1.636766 Supp     b'-1:word:+'
1.635018 Gtype    b'-1:postag:VBG'
1.631766 O        b'-1:lemma:0.3'
1.631766 O        b'-1:word:0.3'
1.627395 O        b'+1:word:WT'
1.618772 O        b'lemma:Cra'
1.615526 Air      b'-2:lemma:fnr'
1.614022 Med      b'lemma:media'
1.614022 Med      b'word:media'
1.605586 O        b'-1:lemma:type'
1.605586 O        b'-1:word:type'
1.604689 Supp     b'lemma:fructose'
1.604689 Supp     b'word:fructose'
1.600748 O        b'+1:lemma:wt'
1.593013 Phase    b'lemma:stationary'
1.593013 Phase    b'word:stationary'
1.593013 Phase    b'lemma:exponential'
1.593013 Phase    b'word:exponential'
1.586820 Air      b'word:anaerobic'
1.585491 O        b'lemma:soxr'
1.585491 O        b'word:SoxR'
1.585491 O        b'lemma:soxs'
1.585491 O        b'word:SoxS'
1.577587 O        b'lemma:CEL'
1.577587 O        b'word:CEL'
1.570675 O        b'lemma:purr'
1.570675 O        b'word:PurR'
1.551200 OD       b'+2:lemma:0.3'
1.529988 Supp     b'+1:lemma:2'
1.529988 Supp     b'+1:word:2'
1.527952 Med      b'lemma:LB'
1.523764 pH       b'lemma:ph5'
1.523764 pH       b'+1:lemma:.5'
1.523764 pH       b'word:pH5'
1.523764 pH       b'+1:word:.5'
1.521430 O        b'+1:word:were'
1.517133 O        b'lemma:rep2'
1.517133 O        b'word:rep2'
1.517133 O        b'lemma:rep1'
1.517133 O        b'word:rep1'
1.513068 Temp     b'-2:lemma:\xcf\x8332'
1.508775 O        b'lemma:chip'
1.500610 Vess     b'lemma:flask'
1.500610 Vess     b'-1:lemma:warm'
1.500610 Vess     b'word:flask'
1.500610 Vess     b'-1:word:warmed'
1.500610 Vess     b'-2:lemma:pre'
1.500610 Vess     b'+2:lemma:43'
1.499940 Gtype    b'lemma:\xce\xb4oxyr'
1.499940 Gtype    b'word:\xce\x94oxyR'
1.488761 Temp     b'-2:lemma:keep'
1.477342 Supp     b'-1:lemma:with'
1.477342 Supp     b'-1:word:with'
1.475935 Supp     b'lemma:Adenine'
1.475935 Supp     b'word:Adenine'
1.473435 Gtype    b'+1:postag::'
1.463312 O        b'lemma::'
1.463312 O        b'word::'
1.451664 O        b'+1:lemma:od600'
1.451664 O        b'+1:word:OD600'
1.443050 O        b'postag:VBN'
1.441029 O        b'lemma:harbor'
1.441029 O        b'word:harboring'
1.435377 Gtype    b'postag:-RRB-'
1.434838 Phase    b'-2:lemma:until'
1.414753 Supp     b'+1:lemma:1'
1.414753 Supp     b'+1:word:1'
1.413175 Gtype    b'-1:lemma:\xe2\x88\x86'
1.413175 Gtype    b'-1:word:\xe2\x88\x86'
1.408409 O        b'+1:lemma:coli'
1.408409 O        b'+1:word:coli'
1.407358 O        b'-1:lemma:glucose'
1.407358 O        b'-1:word:glucose'
1.395461 Supp     b'lemma:nacl'
1.395461 Supp     b'word:NaCl'
1.385619 Strain   b'+1:lemma:substr'
1.385619 Strain   b'+1:word:substr'
1.385619 Strain   b'-2:lemma:str'
1.382292 O        b'+1:lemma:mid-log'
1.382292 O        b'+1:word:mid-log'
1.381383 O        b'lemma:argr'
1.381383 O        b'word:ArgR'
1.371218 Air      b'-1:postag::'
1.368215 Temp     b'lemma:\xc2\xb0c'
1.368215 Temp     b'word:\xc2\xb0C'
1.354903 Supp     b'-2:lemma:for'
1.347471 O        b'-2:ner:MED'
1.344225 OD       b'-2:lemma:od450'
1.343051 O        b'+1:lemma:rifampicin'
1.343051 O        b'+1:word:rifampicin'
1.342946 Temp     b'lemma:43'
1.342946 Temp     b'word:43'
1.342919 Air      b'+2:postag:CD'
1.319293 O        b'+1:lemma:fnr-8myc'
1.319293 O        b'+1:word:Fnr-8myc'
1.318470 O        b'-1:ner:TF'
1.313213 Agit     b'lemma:rpm'
1.313213 Agit     b'word:rpm'
1.311566 O        b'lemma:trpr'
1.311566 O        b'word:TrpR'
1.309442 O        b'word:C'
1.308497 O        b'lemma:a'
1.299525 Supp     b'-2:lemma:argr'
1.299523 Substrain b'+1:lemma:phtpg'
1.299523 Substrain b'+1:word:PhtpG'
1.295121 O        b'lemma:oxyr'
1.295121 O        b'word:OxyR'
1.286257 Gversion b'lemma:.2'
1.286257 Gversion b'-1:lemma:u00096'
1.286257 Gversion b'word:.2'
1.286257 Gversion b'-1:word:U00096'
1.283812 Med      b'+1:lemma:0.4'
1.283812 Med      b'+1:word:0.4'
1.282955 O        b'lemma:from'
1.282955 O        b'word:from'
1.280263 Temp     b'-1:lemma:\xcf\x8332'
1.280263 Temp     b'-1:word:\xcf\x8332'
1.276002 Supp     b'-1:word:OmpR'
1.271564 OD       b'lemma:0.3'
1.271564 OD       b'word:0.3'
1.266798 Supp     b'-1:lemma:ompr'
1.264124 Air      b'lemma:anaeroibc'
1.264124 Air      b'word:Anaeroibc'
1.262221 Gtype    b'-1:lemma:nsrr'
1.262221 Gtype    b'+1:lemma:flagtag'
1.262221 Gtype    b'-1:word:NsrR'
1.262221 Gtype    b'+1:word:Flagtag'
1.256839 Technique b'lemma:ChIP-exo'
1.253133 Supp     b'lemma:glucose'
1.253133 Supp     b'word:glucose'
1.251772 Gversion b'lemma:asm584v2'
1.251772 Gversion b'word:ASM584v2'
1.246100 O        b'-2:lemma:min'
1.244103 O        b'-1:lemma:\xc2\xb0c'
1.244103 O        b'-1:word:\xc2\xb0C'
1.243380 Gtype    b'lemma:\xce\xb4soxs'
1.243380 Gtype    b'word:\xce\x94soxS'
1.240199 Temp     b'-1:lemma:43'
1.240199 Temp     b'-1:word:43'
1.233166 Technique b'lemma:ChIP-Seq'
1.230396 O        b'word:GadX'
1.225991 O        b'+1:lemma:\xe2\x88\x86'
1.225991 O        b'+1:word:\xe2\x88\x86'
1.215333 Technique b'-2:lemma:Fur'
1.211014 O        b'-2:lemma:Cra'
1.208374 O        b'+2:lemma:chipseq'
1.201122 Gtype    b'lemma:arca8myc'
1.201122 Gtype    b'word:ArcA8myc'
1.201122 Gtype    b'-2:lemma:chip-arca'
1.200574 Gtype    b'lemma:\xce\xb4soxr'
1.200574 Gtype    b'word:\xce\x94soxR'
1.197875 Gtype    b'+2:lemma:glucose'
1.197795 O        b'+1:lemma:250'
1.197795 O        b'+1:word:250'
1.188976 O        b'isLower'
1.180980 Gversion b'-2:lemma:build'
1.180709 Phase    b'-1:lemma:mid-log'
1.180709 Phase    b'-1:word:mid-log'
1.174343 O        b'-1:postag:NNP'
1.170411 Gversion b'lemma:u00096'
1.170411 Gversion b'+1:lemma:.2'
1.170411 Gversion b'word:U00096'
1.170411 Gversion b'+1:word:.2'
1.168621 Agit     b'+1:lemma:rpm'
1.168621 Agit     b'+1:word:rpm'
1.164565 O        b'word:for'
1.161056 Supp     b'postag:NNP'
1.161045 Air      b'-2:lemma:%'
1.158365 Supp     b'lemma:Leu'
1.158365 Supp     b'word:Leu'
1.158365 Supp     b'-2:lemma:Lrp'
1.156721 O        b'-1:lemma:pq'
1.156721 O        b'-1:word:PQ'
1.155794 Gtype    b'-1:lemma:rpob'
1.155794 Gtype    b'-1:word:RpoB'
1.150859 Anti     b'+1:lemma:antibody'
1.150859 Anti     b'+1:word:antibody'
1.148277 Technique b'-1:lemma:IP'
1.148277 Technique b'-1:word:IP'
1.147214 O        b'-1:lemma:wt'
1.141114 Air      b'+2:lemma:%'
1.138091 Temp     b'-1:lemma:37'
1.138091 Temp     b'-1:word:37'
1.137894 Med      b'lemma:m63'
1.137894 Med      b'word:M63'
1.135024 O        b'-1:ner:_'
1.131231 Supp     b'-2:lemma:induce'
1.126339 O        b'+2:lemma:constant'
1.120233 O        b'+2:lemma:allow'
1.117062 Technique b'+1:lemma:chip-exo'
1.102991 O        b'+1:postag:VBN'
1.101715 Technique b'-1:lemma:input'
1.101715 Technique b'-1:word:Input'
1.100630 Air      b'+1:lemma:%'
1.100630 Air      b'+1:word:%'
1.099352 Gversion b'-2:postag:VB'
1.095658 Gtype    b'+1:lemma:with'
1.095658 Gtype    b'+1:word:with'
1.094349 Air      b'-2:postag:CD'
1.093705 Supp     b'-2:lemma:10'
1.092438 O        b'-1:lemma:into'
1.092438 O        b'-1:word:into'
1.087719 pH       b'-1:postag:NN'
1.083175 OD       b'lemma:od450'
1.083175 OD       b'word:OD450'
1.083175 OD       b'-1:word:At'
1.082042 OD       b'-1:postag:IN'
1.075594 O        b'+1:lemma:pq'
1.075594 O        b'+1:word:PQ'
1.070142 O        b'lemma:affyexp'
1.070142 O        b'word:affyexp'
1.067677 OD       b'+1:lemma:of'
1.067677 OD       b'+1:word:of'
1.065111 O        b'-1:lemma:mg1655'
1.065111 O        b'-1:word:MG1655'
1.064473 O        b'+2:postag:JJ'
1.051767 Supp     b'lemma:dpd'
1.051767 Supp     b'word:DPD'
1.051644 pH       b'lemma:5.5'
1.051644 pH       b'word:5.5'
1.049088 Anti     b'postag:JJ'
1.047452 O        b'+1:lemma:0.2'
1.047452 O        b'+1:word:0.2'
1.042952 Supp     b'lemma:rifampicin'
1.042952 Supp     b'word:rifampicin'
1.040227 O        b'+2:ner:_'
1.040039 O        b'+2:lemma:fructose'
1.036773 Air      b'-2:lemma:nh4cl'
1.032304 Med      b'isUpper'
1.027109 Substrain b'lemma:mg1655star'
1.027109 Substrain b'word:MG1655star'
1.020863 Med      b'lemma:medium'
1.020863 Med      b'word:medium'
1.010693 Supp     b'-1:postag:CD'
1.009531 Agit     b'-1:lemma:250'
1.009531 Agit     b'-1:word:250'
1.007342 Supp     b'+2:lemma:-lrb-'
1.006167 Med      b'lemma:minimal'
1.006167 Med      b'word:minimal'
0.996343 O        b'word:ml'
0.990819 Gversion b'lemma:000913'
0.990819 Gversion b'word:000913'
0.990819 Gversion b'-2:lemma:nc'
0.990144 Supp     b'-1:lemma:_'
0.990144 Supp     b'-1:word:_'
0.989993 O        b'+2:postag:VB'
0.987124 Gtype    b'lemma:deltaseqa'
0.987124 Gtype    b'-1:lemma:old'
0.987124 Gtype    b'word:deltaSeqA'
0.987124 Gtype    b'-1:word:old'
0.987124 Gtype    b'-2:lemma:seqa'
0.986293 Air      b'-1:lemma:_'
0.986293 Air      b'-1:word:_'
0.983095 Gtype    b'-2:postag:NNS'
0.982073 O        b'-1:lemma:nacl'
0.982073 O        b'-1:word:NaCl'
0.979662 O        b'lemma:ml'
0.975899 Supp     b'+2:postag:-LRB-'
0.975373 Technique b'word:RNA-Seq'
0.974766 Supp     b'lemma:glutamine'
0.974766 Supp     b'-1:lemma:2g/l'
0.974766 Supp     b'word:glutamine'
0.974766 Supp     b'-1:word:2g/L'
0.974611 Supp     b'+2:lemma:feso4'
0.973197 O        b'lemma:chip-fnr'
0.973197 O        b'word:chip-Fnr'
0.973197 O        b'+2:lemma:fnr8myc'
0.973017 O        b'-1:lemma:anaerobic'
0.967529 O        b'-1:lemma:l1'
0.967529 O        b'-1:word:L1'
0.960119 Gtype    b'lemma:ptac'
0.960119 Gtype    b'word:Ptac'
0.954913 O        b'postag:DT'
0.951410 Gversion b'lemma:nc'
0.951410 Gversion b'word:NC'
0.951410 Gversion b'+2:lemma:000913'
0.949278 O        b'-1:lemma:acetate'
0.949278 O        b'-1:word:acetate'
0.947282 O        b'+2:lemma:_'
0.946499 Gtype    b'+1:lemma:pq'
0.946499 Gtype    b'+1:word:PQ'
0.945958 Med      b'postag:NNP'
0.939123 O        b'-1:word:WT'
0.937548 O        b'-1:word:ChIP-exo'
0.936113 Med      b'-2:lemma:minimal'
0.933907 Anti     b'+2:postag:NNP'
0.932926 Air      b'-2:lemma:0.3'
0.927888 O        b'+1:ner:_'
0.921085 Temp     b'lemma:37'
0.921085 Temp     b'word:37'
0.919662 Gtype    b'-1:lemma:factor'
0.919662 Gtype    b'-1:word:factor'
0.919662 Gtype    b'-2:lemma:transcription'
0.918432 Supp     b'-1:lemma:vol'
0.918432 Supp     b'-1:word:vol'
0.918432 Supp     b'-2:lemma:1/100'
0.918432 Supp     b'+2:lemma:1m'
0.917158 OD       b'-2:lemma:of'
0.916972 Gtype    b'+1:lemma:_'
0.916972 Gtype    b'+1:word:_'
0.908269 Technique b'lemma:-lrb-'
0.908269 Technique b'word:-LRB-'
0.907185 Med      b'-1:lemma:minimal'
0.907185 Med      b'-1:word:minimal'
0.905172 pH       b'lemma:.5'
0.905172 pH       b'-1:lemma:ph5'
0.905172 pH       b'word:.5'
0.905172 pH       b'-1:word:pH5'
0.899929 O        b'+1:lemma:20'
0.899929 O        b'+1:word:20'
0.899538 Technique b'postag:-LRB-'
0.895920 OD       b'-1:lemma:od450'
0.895920 OD       b'-1:word:OD450'
0.887149 Supp     b'-2:lemma:purr'
0.880046 Phase    b'postag:NN'
0.877425 O        b'-2:ner:_'
0.874139 Gtype    b'+1:word:the'
0.867650 Gtype    b'-2:postag:JJ'
0.864961 Agit     b'lemma:250'
0.864961 Agit     b'word:250'
0.864371 pH       b'-2:lemma:at'
0.858968 O        b'lemma:\xcf\x8332'
0.858968 O        b'word:\xcf\x8332'
0.856194 Air      b'+2:lemma:37'
0.850962 Supp     b'lemma:Fe'
0.850962 Supp     b'word:Fe'
0.850658 Vess     b'-1:postag:VBN'
0.848805 Gtype    b'+1:lemma:the'
0.848533 O        b'lemma:treatment'
0.848533 O        b'word:treatment'
0.843476 O        b'lemma:chip-arca'
0.843476 O        b'word:chip-ArcA'
0.843476 O        b'+2:lemma:arca8myc'
0.842175 Gtype    b'+2:postag:NN'
0.841481 O        b'-2:lemma:reach'
0.839059 O        b'lemma:input'
0.839059 O        b'+1:lemma:chip-seq'
0.839059 O        b'word:Input'


Top negative:
-0.029488 Phase    b'+2:postag:CD'
-0.029643 O        b'+2:lemma:the'
-0.029646 Strain   b'isLower'
-0.029755 O        b'+1:lemma:.'
-0.029755 O        b'+1:postag:.'
-0.029755 O        b'+1:word:.'
-0.029913 O        b'+2:ner:MED'
-0.030892 Anti     b'-1:ner:_'
-0.031095 O        b'-2:lemma:25'
-0.031121 O        b'-1:lemma:ml'
-0.032219 Supp     b'-2:lemma:,'
-0.032219 Supp     b'-2:postag:,'
-0.032310 Gversion b'+1:ner:_'
-0.032802 Agit     b'-1:ner:_'
-0.032928 Gversion b'-1:postag:NN'
-0.033220 O        b'-1:ner:MED'
-0.033405 Supp     b'isNumber'
-0.034098 O        b'lemma:m'
-0.034098 O        b'word:M'
-0.034532 OD       b'-1:lemma:='
-0.034532 OD       b'-1:word:='
-0.035917 OD       b'+1:lemma:0.4'
-0.035917 OD       b'+1:word:0.4'
-0.036060 Gversion b'+2:ner:_'
-0.036867 Supp     b'+1:word:were'
-0.036868 O        b'-2:lemma:at'
-0.037304 Supp     b'-2:lemma:.'
-0.037304 Supp     b'-2:postag:.'
-0.037541 O        b'+1:lemma:n2'
-0.037541 O        b'+1:word:N2'
-0.038085 O        b'+2:lemma:ph'
-0.038716 O        b'+1:lemma:mm'
-0.038716 O        b'+1:word:mM'
-0.038716 O        b'+1:ner:KWSUPP'
-0.039123 Supp     b'lemma:10'
-0.039123 Supp     b'word:10'
-0.041549 O        b'lemma:mg/ml'
-0.041549 O        b'-1:lemma:150'
-0.041549 O        b'word:mg/mL'
-0.041549 O        b'-1:word:150'
-0.041642 O        b'-1:word:ml'
-0.041669 Air      b'-1:postag:CC'
-0.041670 O        b'+1:postag:NNS'
-0.042026 OD       b'lemma:0.4'
-0.042026 OD       b'word:0.4'
-0.042167 O        b'+1:lemma:sample'
-0.042628 O        b'-2:postag:IN'
-0.043275 O        b'lemma:vol'
-0.043275 O        b'-1:lemma:1/100'
-0.043275 O        b'word:vol'
-0.043275 O        b'-1:word:1/100'
-0.043383 Gtype    b'-1:lemma:,'
-0.043383 Gtype    b'-1:postag:,'
-0.043383 Gtype    b'-1:word:,'
-0.043947 O        b'-1:lemma:n2'
-0.043947 O        b'-1:word:N2'
-0.043997 O        b'+2:postag:CC'
-0.045650 O        b'-2:lemma:rna'
-0.045807 O        b'lemma:methanol'
-0.045807 O        b'word:methanol'
-0.045807 O        b'-2:lemma:dissolve'
-0.046504 O        b'+2:lemma:fecl2'
-0.048415 O        b'+2:lemma:nitrate'
-0.049115 O        b'+1:lemma:minimal'
-0.049115 O        b'+1:word:minimal'
-0.049444 Supp     b'-1:lemma:10'
-0.049444 Supp     b'-1:word:10'
-0.049972 Supp     b'+1:lemma:dpd'
-0.049972 Supp     b'+1:word:DPD'
-0.051377 OD       b'-2:postag:DT'
-0.051497 O        b'-1:lemma:fresh'
-0.051497 O        b'-1:word:fresh'
-0.052270 OD       b'-2:lemma:grow'
-0.052578 O        b'-1:lemma:final'
-0.052578 O        b'-1:word:final'
-0.053320 Supp     b'+1:postag::'
-0.053445 Supp     b'-1:postag:VBN'
-0.054347 O        b'+2:lemma:od600'
-0.054847 O        b'+1:lemma:media'
-0.054847 O        b'+1:word:media'
-0.055931 O        b'-2:lemma:0.1'
-0.056848 OD       b'+2:lemma:a'
-0.058667 O        b'lemma:od600'
-0.058667 O        b'word:OD600'
-0.058812 Agit     b'-2:ner:_'
-0.059699 O        b'+2:lemma:media'
-0.060383 O        b'lemma:nh4cl'
-0.060750 O        b'+1:lemma:1/100'
-0.060750 O        b'+1:word:1/100'
-0.060750 O        b'-2:lemma:sodium'
-0.060750 O        b'+2:lemma:vol'
-0.061091 O        b'+1:lemma:~'
-0.061091 O        b'+1:word:~'
-0.062183 Air      b'postag:CD'
-0.062203 OD       b'lemma:2.0'
-0.062203 OD       b'word:2.0'
-0.062839 O        b'-1:lemma:0.2'
-0.062839 O        b'-1:word:0.2'
-0.063628 O        b'lemma:;'
-0.063628 O        b'-1:lemma:7.6'
-0.063628 O        b'word:;'
-0.063628 O        b'-1:word:7.6'
-0.063745 Supp     b'-1:lemma:dpd'
-0.063745 Supp     b'-1:word:DPD'
-0.066032 O        b'-1:lemma:.'
-0.066032 O        b'-1:postag:.'
-0.066032 O        b'-1:word:.'
-0.066210 Supp     b'lemma:paraquat'
-0.066210 Supp     b'word:paraquat'
-0.066210 Supp     b'-2:lemma:um'
-0.067131 Gtype    b'-1:postag:JJ'
-0.067677 O        b'+1:lemma:genome'
-0.067677 O        b'+1:word:genome'
-0.069816 Gversion b'-2:postag:NN'
-0.070420 Supp     b'lemma:1'
-0.070420 Supp     b'word:1'
-0.071657 Med      b'+1:ner:MED'
-0.071811 Supp     b'-2:lemma:treat'
-0.071895 Med      b'+1:postag:IN'
-0.072427 O        b'lemma:m63'
-0.072427 O        b'word:M63'
-0.072911 OD       b'-2:lemma:a'
-0.073180 OD       b'isLower'
-0.073524 O        b'lemma:o2'
-0.073524 O        b'word:O2'
-0.074012 O        b'-2:lemma:%'
-0.074187 O        b'-1:postag:CD'
-0.074483 Strain   b'+2:ner:_'
-0.076007 O        b'-2:lemma:cell'
-0.077136 Air      b'isLower'
-0.078170 O        b'word:LB'
-0.079513 Vess     b'postag:NN'
-0.080867 O        b'-2:lemma:for'
-0.081123 Gtype    b'postag::'
-0.081326 O        b'+1:word:a'
-0.081397 O        b'+1:lemma:phase'
-0.081397 O        b'+1:word:phase'
-0.081467 O        b'+2:postag:IN'
-0.084045 Temp     b'-1:postag:IN'
-0.085379 O        b'+1:lemma:of'
-0.085379 O        b'+1:word:of'
-0.086298 Med      b'+2:ner:MED'
-0.087346 O        b'-2:postag:VBN'
-0.088286 Supp     b'+2:lemma:dpd'
-0.088429 O        b'+2:lemma:fnr'
-0.088962 Supp     b'-2:lemma:glucose'
-0.090020 Gtype    b'-2:postag:CC'
-0.090170 O        b'lemma:dissolve'
-0.090170 O        b'word:dissolved'
-0.090170 O        b'+2:lemma:methanol'
-0.090398 O        b'lemma:ph'
-0.090398 O        b'word:pH'
-0.090555 Gtype    b'lemma:_'
-0.090555 Gtype    b'word:_'
-0.090620 Technique b'-2:postag:NN'
-0.090838 O        b'lemma:\xce\xb4oxyr'
-0.090838 O        b'word:\xce\x94oxyR'
-0.091466 O        b'+1:lemma:5'
-0.091466 O        b'+1:word:5'
-0.092811 O        b'-1:lemma:o2'
-0.092811 O        b'-1:word:O2'
-0.093220 Air      b'-2:lemma:be'
-0.093436 Supp     b'postag:CC'
-0.094043 O        b'postag:JJ'
-0.095109 O        b'-2:lemma:dna'
-0.097077 O        b'+1:lemma:fecl2'
-0.097077 O        b'+1:word:FeCl2'
-0.097208 Air      b'+2:lemma:70'
-0.097966 Air      b'+2:postag:IN'
-0.098622 Supp     b'lemma:um'
-0.098622 Supp     b'word:uM'
-0.098622 Supp     b'+2:lemma:paraquat'
-0.099392 O        b'-1:lemma:mm'
-0.099392 O        b'-1:word:mM'
-0.099923 O        b'lemma:0.1'
-0.099923 O        b'word:0.1'
-0.100862 OD       b'isUpper'
-0.101339 OD       b'lemma:~'
-0.101339 OD       b'word:~'
-0.103551 Agit     b'+1:ner:_'
-0.103750 O        b'+2:ner:SUPP'
-0.106536 O        b'-1:lemma:-lrb-'
-0.106536 O        b'-1:word:-LRB-'
-0.107819 Supp     b'-2:lemma:with'
-0.108082 Air      b'isUpper'
-0.108282 O        b'-2:lemma:\xc2\xb0c'
-0.108710 O        b'lemma:7.6'
-0.108710 O        b'+1:lemma:;'
-0.108710 O        b'word:7.6'
-0.108710 O        b'+1:word:;'
-0.109888 O        b'word:WT'
-0.111399 Supp     b'postag:IN'
-0.112339 Supp     b'-1:lemma:250'
-0.112339 Supp     b'-1:word:250'
-0.112394 Med      b'postag:CD'
-0.116916 O        b'lemma:0.2'
-0.116916 O        b'word:0.2'
-0.118797 O        b'-1:lemma:g/l'
-0.118797 O        b'-1:word:g/L'
-0.120275 O        b'+2:lemma:sample'
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-0.124022 Supp     b'+1:lemma:nacl'
-0.124022 Supp     b'+1:word:NaCl'
-0.124656 Supp     b'postag::'
-0.124869 Substrain b'-1:ner:_'
-0.128278 Anti     b'+1:ner:_'
-0.129151 O        b'+1:lemma:%'
-0.129151 O        b'+1:word:%'
-0.129627 Gtype    b'+1:ner:_'
-0.131165 Supp     b'-2:lemma:0.2'
-0.131625 O        b'-2:lemma:-lrb-'
-0.132826 O        b'lemma:co2'
-0.132826 O        b'word:CO2'
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-0.133183 O        b'+1:word:-RRB-'
-0.133474 O        b'-2:lemma:20'
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-0.135962 O        b'-2:lemma:to'
-0.135962 O        b'-2:postag:TO'
-0.136126 O        b'+2:lemma:~'
-0.137211 Supp     b'+1:postag:VBN'
-0.137671 Med      b'-2:lemma:in'
-0.139579 O        b'lemma:medium'
-0.139579 O        b'word:medium'
-0.140111 O        b'+2:lemma:at'
-0.142284 Supp     b'lemma:2'
-0.142284 Supp     b'word:2'
-0.142835 O        b'+2:lemma:n2'
-0.144341 O        b'+1:postag:DT'
-0.145643 O        b'-1:lemma:dissolve'
-0.145643 O        b'+1:lemma:methanol'
-0.145643 O        b'-1:word:dissolved'
-0.145643 O        b'+1:word:methanol'
-0.146292 O        b'lemma:150'
-0.146292 O        b'+1:lemma:mg/ml'
-0.146292 O        b'word:150'
-0.146292 O        b'+1:word:mg/mL'
-0.146292 O        b'-2:lemma:concentration'
-0.146824 Temp     b'-2:postag:JJ'
-0.150308 O        b'lemma:1m'
-0.150308 O        b'word:1M'
-0.150616 O        b'+1:lemma:+'
-0.150616 O        b'+1:word:+'
-0.151532 Phase    b'+2:ner:_'
-0.152653 Vess     b'+1:ner:_'
-0.153127 O        b'-2:lemma:grow'
-0.154007 O        b'+1:lemma:hour'
-0.154245 O        b'-2:lemma:g/l'
-0.155276 Temp     b'+2:lemma:with'
-0.155910 Supp     b'lemma:-rrb-'
-0.155910 Supp     b'word:-RRB-'
-0.160803 Supp     b'lemma:-lrb-'
-0.160803 Supp     b'word:-LRB-'
-0.160964 OD       b'+2:postag:RB'
-0.162851 O        b'-2:lemma:nh4cl'
-0.165076 Temp     b'-1:ner:_'
-0.165939 Temp     b'+2:postag:IN'
-0.168714 O        b'+2:lemma:in'
-0.170658 Gtype    b'+1:lemma:\xe2\x88\x86'
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-0.173362 O        b'+1:lemma:-lrb-'
-0.173362 O        b'+1:word:-LRB-'
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-0.176202 O        b'-1:postag:IN'
-0.176774 Temp     b'+1:lemma:with'
-0.176774 Temp     b'+1:word:with'
-0.178089 Supp     b'-2:lemma:-lrb-'
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-0.182452 O        b'-2:lemma:o2'
-0.182586 Supp     b'postag:-LRB-'
-0.185199 Air      b'-2:postag:CC'
-0.187155 Supp     b'+2:postag:NNS'
-0.187458 Supp     b'+1:lemma:-rrb-'
-0.187458 Supp     b'+1:word:-RRB-'
-0.188044 O        b'-1:lemma:of'
-0.188044 O        b'-1:word:of'
-0.192388 O        b'-2:lemma:nitrate'
-0.198141 Supp     b'postag:-RRB-'
-0.199479 O        b'-1:lemma:1m'
-0.199479 O        b'-1:word:1M'
-0.199479 O        b'+2:lemma:7.6'
-0.200314 Vess     b'-1:ner:_'
-0.200612 Supp     b'-2:postag:-LRB-'
-0.200977 O        b'-1:lemma:~'
-0.200977 O        b'-1:word:~'
-0.201685 O        b'lemma:sample'
-0.203061 OD       b'postag:NN'
-0.204079 O        b'-1:lemma:the'
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-0.205197 O        b'lemma:nacl'
-0.205197 O        b'word:NaCl'
-0.205541 O        b'-1:postag::'
-0.210307 Med      b'-2:lemma:grow'
-0.210343 Med      b'-1:postag:NN'
-0.212876 O        b'+1:word:was'
-0.214913 O        b'-1:lemma:minimal'
-0.214913 O        b'-1:word:minimal'
-0.216152 Med      b'-2:postag:VBN'
-0.220119 Med      b'-2:lemma:m9'
-0.221259 O        b'+2:lemma:agitation'
-0.221651 O        b'+1:lemma:m'
-0.221651 O        b'+1:word:M'
-0.225357 Temp     b'isLower'
-0.226391 Supp     b'+1:lemma:rifampicin'
-0.226391 Supp     b'+1:word:rifampicin'
-0.228456 Supp     b'+1:postag:-RRB-'
-0.236395 Supp     b'+2:lemma:-rrb-'
-0.237040 O        b'-1:lemma:until'
-0.237040 O        b'-1:word:until'
-0.242109 O        b'-1:lemma:contain'
-0.242109 O        b'-1:word:containing'
-0.243093 Supp     b'lemma:.'
-0.243093 Supp     b'postag:.'
-0.243093 Supp     b'word:.'
-0.245228 Gtype    b'+1:lemma:,'
-0.245228 Gtype    b'+1:postag:,'
-0.245228 Gtype    b'+1:word:,'
-0.245638 O        b'+1:lemma:1m'
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-0.255282 Supp     b'+2:postag:-RRB-'
-0.255364 O        b'+1:lemma:g/l'
-0.255364 O        b'+1:word:g/L'
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-0.263017 O        b'-1:lemma:rpob'
-0.263017 O        b'-1:word:RpoB'
-0.265288 pH       b'isUpper'
-0.265831 O        b'lemma:pahse'
-0.265831 O        b'word:pahse'
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-2.314395 O        b'+2:lemma:iptg'
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