********** TRAINING AND TESTING REPORT **********
Training file: training-data-set-70-NER.txt

best params:{'c1': 0.013238583670779116, 'c2': 0.056920094726963036}
best CV score:0.8269983740799899
model size: 0.19M

Flat F1: 0.8042503879310074
             precision    recall  f1-score   support

         OD      1.000     1.000     1.000        21
         pH      1.000     1.000     1.000        10
  Technique      1.000     1.000     1.000        33
        Med      1.000     0.821     0.902        56
       Temp      0.857     0.800     0.828        15
       Vess      0.000     0.000     0.000         0
       Agit      0.000     0.000     0.000         7
      Phase      1.000     0.762     0.865        21
        Air      0.900     0.409     0.563        88
       Anti      0.600     0.692     0.643        13
     Strain      0.000     0.000     0.000         0
      Gtype      0.952     0.756     0.843        78
  Substrain      0.000     0.000     0.000         0
       Supp      0.877     0.838     0.857       136
   Gversion      1.000     0.500     0.667         6

avg / total      0.910     0.742     0.804       484


Top likely transitions:
Temp   -> Temp    4.399571
OD     -> OD      4.378822
Anti   -> Anti    4.164114
Gtype  -> Gtype   4.095482
Supp   -> Supp    4.004093
Med    -> Med     3.946910
Phase  -> Phase   3.713266
O      -> O       3.242098
Gversion -> Gversion 3.100061
Technique -> Technique 2.936495
Air    -> Air     2.883094
pH     -> pH      2.543206
Agit   -> Agit    1.643448
Substrain -> Gtype   1.157197
Technique -> Air     0.914360
O      -> Technique 0.291151
Strain -> O       0.277753
Gtype  -> pH      0.248099
Gtype  -> Supp    0.124687
Vess   -> O       0.096885
O      -> Strain  0.030764
Air    -> O       0.024372
Supp   -> O       0.023281
O      -> Gtype   0.022870
O      -> Vess    0.015546
Temp   -> Gversion -0.000003
Temp   -> Phase   -0.000013
OD     -> pH      -0.000028
Vess   -> Air     -0.000102
Gtype  -> Air     -0.000119
Substrain -> Air     -0.000239
pH     -> O       -0.000620
Gversion -> Temp    -0.002229
pH     -> Med     -0.003173
Vess   -> Supp    -0.006678
Gversion -> Phase   -0.007593
Gtype  -> Strain  -0.009688
OD     -> Agit    -0.010328
Temp   -> Technique -0.012552
Gtype  -> Vess    -0.015085
O      -> pH      -0.015394
Gversion -> Anti    -0.016088
Supp   -> Vess    -0.017450
Technique -> Temp    -0.022561
pH     -> Agit    -0.023150
OD     -> Gversion -0.024072
Gversion -> pH      -0.025882
Med    -> Agit    -0.026343
Anti   -> O       -0.030174
Agit   -> Gtype   -0.030299
O      -> Substrain -0.033134
Strain -> Air     -0.035482
Agit   -> Technique -0.036254
Supp   -> Agit    -0.046232
Agit   -> O       -0.048145
Technique -> Agit    -0.048471
pH     -> OD      -0.053047
Med    -> Gversion -0.059459
Technique -> Anti    -0.060700
pH     -> Temp    -0.061136
pH     -> Gversion -0.061912
Gversion -> Med     -0.065494
Gtype  -> Substrain -0.073028
Temp   -> Anti    -0.073826
pH     -> Gtype   -0.075799
Anti   -> pH      -0.076858
Strain -> Supp    -0.089067
Anti   -> OD      -0.094032
Air    -> Anti    -0.095565
Gversion -> OD      -0.099180
Gtype  -> Agit    -0.102727
Temp   -> OD      -0.108453
Med    -> Anti    -0.115026
Phase  -> Temp    -0.119189
Med    -> pH      -0.126153
Anti   -> Technique -0.129977
Air    -> pH      -0.133047
Strain -> Gtype   -0.138964
OD     -> Gtype   -0.140426
O      -> Agit    -0.144649
Temp   -> O       -0.148970
Substrain -> Supp    -0.152360
Temp   -> Gtype   -0.155838
Med    -> OD      -0.166262
Gversion -> Technique -0.175182
Phase  -> Air     -0.180619
Supp   -> pH      -0.193522
OD     -> Technique -0.197226
Technique -> Med     -0.206306
Phase  -> Anti    -0.208200
Agit   -> Supp    -0.217907
O      -> Temp    -0.221161
OD     -> Med     -0.225245
OD     -> O       -0.225532
Technique -> Gversion -0.225654
O      -> Phase   -0.233765
Phase  -> Gtype   -0.236834
pH     -> Air     -0.239012
Anti   -> Phase   -0.242977
Anti   -> Air     -0.257951
Air    -> Gversion -0.259094
Med    -> Gtype   -0.263727
OD     -> Temp    -0.268512
Supp   -> Phase   -0.283517
Gversion -> Gtype   -0.298308
Supp   -> Technique -0.301710
Air    -> Technique -0.303340
Med    -> Temp    -0.311822
Supp   -> OD      -0.319257
Supp   -> Temp    -0.326703
Air    -> Gtype   -0.337502
Supp   -> Gversion -0.358314
Supp   -> Anti    -0.359710
Anti   -> Med     -0.364708
Gtype  -> OD      -0.369143
O      -> Supp    -0.373831
Agit   -> Air     -0.378555
Temp   -> Supp    -0.384081
Technique -> O       -0.401718
Phase  -> O       -0.408202
Med    -> Technique -0.413888
Phase  -> Technique -0.432526
Anti   -> Gtype   -0.436789
Air    -> OD      -0.443775
Supp   -> Air     -0.449255
Gtype  -> Temp    -0.452549
Air    -> Med     -0.456783
Technique -> OD      -0.456796
Phase  -> Med     -0.458096
Gtype  -> Gversion -0.473748
Gtype  -> Phase   -0.479366
Technique -> Supp    -0.484066
Gversion -> Air     -0.492090
Air    -> Phase   -0.496291
Temp   -> Med     -0.497606
Supp   -> Gtype   -0.504042
Temp   -> Air     -0.504847
Phase  -> Supp    -0.506519
pH     -> Supp    -0.512584
Air    -> Temp    -0.541175
Gtype  -> Technique -0.550474
Med    -> Air     -0.552121
Gversion -> O       -0.553760
Phase  -> OD      -0.565747
Gversion -> Supp    -0.577064
Anti   -> Supp    -0.578226
Anti   -> Temp    -0.629167
Air    -> Agit    -0.631105
O      -> Gversion -0.638620
OD     -> Supp    -0.669601
Med    -> O       -0.673164
O      -> Anti    -0.682368
Gtype  -> Med     -0.703534
OD     -> Air     -0.713669
O      -> OD      -0.715367
Technique -> Gtype   -0.761335
Gtype  -> Anti    -0.846364
Air    -> Supp    -0.912542
Substrain -> O       -0.957072
Gtype  -> O       -1.036146
Technique -> pH      -1.127410
O      -> Med     -1.337852
Supp   -> Med     -1.363011
O      -> Air     -1.971891
Med    -> Supp    -2.003467


Top unlikely transitions:
Temp   -> Temp    4.399571
OD     -> OD      4.378822
Anti   -> Anti    4.164114
Gtype  -> Gtype   4.095482
Supp   -> Supp    4.004093
Med    -> Med     3.946910
Phase  -> Phase   3.713266
O      -> O       3.242098
Gversion -> Gversion 3.100061
Technique -> Technique 2.936495
Air    -> Air     2.883094
pH     -> pH      2.543206
Agit   -> Agit    1.643448
Substrain -> Gtype   1.157197
Technique -> Air     0.914360
O      -> Technique 0.291151
Strain -> O       0.277753
Gtype  -> pH      0.248099
Gtype  -> Supp    0.124687
Vess   -> O       0.096885
O      -> Strain  0.030764
Air    -> O       0.024372
Supp   -> O       0.023281
O      -> Gtype   0.022870
O      -> Vess    0.015546
Temp   -> Gversion -0.000003
Temp   -> Phase   -0.000013
OD     -> pH      -0.000028
Vess   -> Air     -0.000102
Gtype  -> Air     -0.000119
Substrain -> Air     -0.000239
pH     -> O       -0.000620
Gversion -> Temp    -0.002229
pH     -> Med     -0.003173
Vess   -> Supp    -0.006678
Gversion -> Phase   -0.007593
Gtype  -> Strain  -0.009688
OD     -> Agit    -0.010328
Temp   -> Technique -0.012552
Gtype  -> Vess    -0.015085
O      -> pH      -0.015394
Gversion -> Anti    -0.016088
Supp   -> Vess    -0.017450
Technique -> Temp    -0.022561
pH     -> Agit    -0.023150
OD     -> Gversion -0.024072
Gversion -> pH      -0.025882
Med    -> Agit    -0.026343
Anti   -> O       -0.030174
Agit   -> Gtype   -0.030299
O      -> Substrain -0.033134
Strain -> Air     -0.035482
Agit   -> Technique -0.036254
Supp   -> Agit    -0.046232
Agit   -> O       -0.048145
Technique -> Agit    -0.048471
pH     -> OD      -0.053047
Med    -> Gversion -0.059459
Technique -> Anti    -0.060700
pH     -> Temp    -0.061136
pH     -> Gversion -0.061912
Gversion -> Med     -0.065494
Gtype  -> Substrain -0.073028
Temp   -> Anti    -0.073826
pH     -> Gtype   -0.075799
Anti   -> pH      -0.076858
Strain -> Supp    -0.089067
Anti   -> OD      -0.094032
Air    -> Anti    -0.095565
Gversion -> OD      -0.099180
Gtype  -> Agit    -0.102727
Temp   -> OD      -0.108453
Med    -> Anti    -0.115026
Phase  -> Temp    -0.119189
Med    -> pH      -0.126153
Anti   -> Technique -0.129977
Air    -> pH      -0.133047
Strain -> Gtype   -0.138964
OD     -> Gtype   -0.140426
O      -> Agit    -0.144649
Temp   -> O       -0.148970
Substrain -> Supp    -0.152360
Temp   -> Gtype   -0.155838
Med    -> OD      -0.166262
Gversion -> Technique -0.175182
Phase  -> Air     -0.180619
Supp   -> pH      -0.193522
OD     -> Technique -0.197226
Technique -> Med     -0.206306
Phase  -> Anti    -0.208200
Agit   -> Supp    -0.217907
O      -> Temp    -0.221161
OD     -> Med     -0.225245
OD     -> O       -0.225532
Technique -> Gversion -0.225654
O      -> Phase   -0.233765
Phase  -> Gtype   -0.236834
pH     -> Air     -0.239012
Anti   -> Phase   -0.242977
Anti   -> Air     -0.257951
Air    -> Gversion -0.259094
Med    -> Gtype   -0.263727
OD     -> Temp    -0.268512
Supp   -> Phase   -0.283517
Gversion -> Gtype   -0.298308
Supp   -> Technique -0.301710
Air    -> Technique -0.303340
Med    -> Temp    -0.311822
Supp   -> OD      -0.319257
Supp   -> Temp    -0.326703
Air    -> Gtype   -0.337502
Supp   -> Gversion -0.358314
Supp   -> Anti    -0.359710
Anti   -> Med     -0.364708
Gtype  -> OD      -0.369143
O      -> Supp    -0.373831
Agit   -> Air     -0.378555
Temp   -> Supp    -0.384081
Technique -> O       -0.401718
Phase  -> O       -0.408202
Med    -> Technique -0.413888
Phase  -> Technique -0.432526
Anti   -> Gtype   -0.436789
Air    -> OD      -0.443775
Supp   -> Air     -0.449255
Gtype  -> Temp    -0.452549
Air    -> Med     -0.456783
Technique -> OD      -0.456796
Phase  -> Med     -0.458096
Gtype  -> Gversion -0.473748
Gtype  -> Phase   -0.479366
Technique -> Supp    -0.484066
Gversion -> Air     -0.492090
Air    -> Phase   -0.496291
Temp   -> Med     -0.497606
Supp   -> Gtype   -0.504042
Temp   -> Air     -0.504847
Phase  -> Supp    -0.506519
pH     -> Supp    -0.512584
Air    -> Temp    -0.541175
Gtype  -> Technique -0.550474
Med    -> Air     -0.552121
Gversion -> O       -0.553760
Phase  -> OD      -0.565747
Gversion -> Supp    -0.577064
Anti   -> Supp    -0.578226
Anti   -> Temp    -0.629167
Air    -> Agit    -0.631105
O      -> Gversion -0.638620
OD     -> Supp    -0.669601
Med    -> O       -0.673164
O      -> Anti    -0.682368
Gtype  -> Med     -0.703534
OD     -> Air     -0.713669
O      -> OD      -0.715367
Technique -> Gtype   -0.761335
Gtype  -> Anti    -0.846364
Air    -> Supp    -0.912542
Substrain -> O       -0.957072
Gtype  -> O       -1.036146
Technique -> pH      -1.127410
O      -> Med     -1.337852
Supp   -> Med     -1.363011
O      -> Air     -1.971891
Med    -> Supp    -2.003467


Top positive:
4.001929 O        b'lemma:_'
4.001929 O        b'word:_'
3.559823 Gtype    b'word:WT'
3.341311 Air      b'lemma:anaerobic'
3.242122 Gtype    b'hGreek'
2.748159 Supp     b'lemma:Iron'
2.748159 Supp     b'word:Iron'
2.748159 Supp     b'+1:word:Deficient'
2.728756 Technique b'word:ChIPSeq'
2.727539 Air      b'postag:RB'
2.663530 Air      b'word:Aerobic'
2.662110 O        b'word:Cra'
2.629013 Gtype    b'lemma:wt'
2.479156 Technique b'lemma:chipseq'
2.472458 Air      b'word:Anaerobic'
2.464047 Supp     b'lemma:pq'
2.464047 Supp     b'word:PQ'
2.413368 Supp     b'lemma:2h'
2.413368 Supp     b'-1:lemma:additional'
2.413368 Supp     b'word:2h'
2.413368 Supp     b'-1:word:additional'
2.365885 Gtype    b'-1:ner:GEN'
2.359721 Med      b'word:LB'
2.275872 Air      b'lemma:aerobically'
2.275872 Air      b'word:aerobically'
2.269329 O        b'postag::'
2.251429 Supp     b'-1:ner:SUPP'
2.230587 O        b'lemma:1'
2.230587 O        b'word:1'
2.199801 Supp     b'+1:lemma:\xc2\xb5m'
2.199801 Supp     b'+1:word:\xc2\xb5M'
2.154389 Supp     b'lemma:no3'
2.154389 Supp     b'word:NO3'
2.140703 Supp     b'lemma:nh4cl'
2.134821 O        b'lemma:2'
2.134821 O        b'word:2'
2.129055 Phase    b'lemma:stationary'
2.129055 Phase    b'word:stationary'
2.129055 Phase    b'lemma:exponential'
2.129055 Phase    b'word:exponential'
2.128302 O        b'-1:word:tag'
2.092764 Technique b'word:ChIP-exo'
2.092583 O        b'lemma:.'
2.092583 O        b'postag:.'
2.092583 O        b'word:.'
2.092561 O        b'postag:VBG'
2.071043 Supp     b'-1:word:Cra'
2.037003 Gversion b'lemma:asm584v2'
2.037003 Gversion b'word:ASM584v2'
2.033708 Med      b'lemma:MOPS'
2.033708 Med      b'word:MOPS'
2.028881 O        b'lemma:-'
2.028881 O        b'word:-'
2.025476 Strain   b'lemma:k-12'
2.025476 Strain   b'word:K-12'
2.009482 O        b'-1:lemma:lb'
1.997252 O        b'-2:ner:MED'
1.979636 O        b'-1:lemma:tag'
1.974078 Gtype    b'lemma:type'
1.974078 Gtype    b'word:type'
1.927036 Air      b'word:anaerobic'
1.895921 O        b'lemma:b'
1.895921 O        b'word:B'
1.894166 Air      b'lemma:aerobic'
1.890391 Phase    b'lemma:mid-log'
1.890391 Phase    b'word:mid-log'
1.886603 O        b'-1:word:Anaerobic'
1.878274 Gtype    b'+2:ner:SUPP'
1.869864 O        b'lemma:Cra'
1.867303 Technique b'lemma:ChIP-exo'
1.857813 Technique b'hUpper'
1.855899 Air      b'-1:lemma:co2'
1.855899 Air      b'-1:word:CO2'
1.846508 Gversion b'word:ChIP-Seq'
1.844558 O        b'-1:lemma:glucose'
1.844558 O        b'-1:word:glucose'
1.844433 Gversion b'lemma:chip-seq'
1.835333 O        b'+1:ner:MED'
1.817797 Supp     b'lemma:iptg'
1.817797 Supp     b'word:IPTG'
1.794817 O        b'lemma:3'
1.794817 O        b'word:3'
1.791108 Supp     b'-1:lemma:Cra'
1.755590 O        b'lemma:rep2'
1.755590 O        b'word:rep2'
1.755590 O        b'lemma:rep1'
1.755590 O        b'word:rep1'
1.748895 Vess     b'lemma:flask'
1.748895 Vess     b'-1:lemma:warm'
1.748895 Vess     b'word:flask'
1.748895 Vess     b'-1:word:warmed'
1.741297 O        b'word:A'
1.735217 Gtype    b'+1:postag::'
1.684279 Gtype    b'+1:lemma:type'
1.684279 Gtype    b'+1:word:type'
1.670847 Phase    b'postag:NN'
1.654090 Substrain b'lemma:mg1655'
1.654090 Substrain b'word:MG1655'
1.652766 O        b'+1:lemma:pq'
1.652766 O        b'+1:word:PQ'
1.650151 O        b'lemma:with'
1.650151 O        b'word:with'
1.648492 O        b'lemma:chip-fnr'
1.648492 O        b'word:chip-Fnr'
1.639245 O        b'lemma:CEL'
1.639245 O        b'word:CEL'
1.633962 Supp     b'lemma:Fe'
1.633962 Supp     b'word:Fe'
1.631414 O        b'lemma:rpob'
1.631414 O        b'word:RpoB'
1.623746 Air      b'-1:lemma:ChIP-Seq'
1.623746 Air      b'-1:word:ChIP-Seq'
1.622964 O        b'lemma:chip-arca'
1.622964 O        b'word:chip-ArcA'
1.605679 O        b'-1:lemma:0.3'
1.605679 O        b'-1:word:0.3'
1.597777 Supp     b'+1:word:was'
1.588792 Vess     b'-1:postag:VBN'
1.581779 O        b'lemma:purr'
1.581779 O        b'word:PurR'
1.580939 Supp     b'lemma:nacl'
1.580939 Supp     b'word:NaCl'
1.575641 Gtype    b'lemma:dfnr'
1.575641 Gtype    b'word:dFNR'
1.575518 Med      b'lemma:LB'
1.571642 O        b'-1:postag:NNS'
1.571515 O        b'postag:IN'
1.569692 Gtype    b'lemma:wildtype'
1.568997 Supp     b'lemma:dpd'
1.568997 Supp     b'word:DPD'
1.566444 Strain   b'+1:lemma:substr'
1.566444 Strain   b'+1:word:substr'
1.561637 O        b'lemma:at'
1.559635 O        b'-1:lemma:pq'
1.559635 O        b'-1:word:PQ'
1.549615 pH       b'+1:postag:CD'
1.546400 Air      b'-1:lemma:-'
1.546400 Air      b'-1:word:-'
1.542302 Med      b'lemma:minimal'
1.542302 Med      b'word:minimal'
1.540227 O        b'-1:word:Aerobic'
1.539713 O        b'lemma:\xcf\x8332'
1.539713 O        b'word:\xcf\x8332'
1.539622 pH       b'lemma:ph5'
1.539622 pH       b'+1:lemma:.5'
1.539622 pH       b'word:pH5'
1.539622 pH       b'+1:word:.5'
1.537926 Med      b'+1:lemma:0.4'
1.537926 Med      b'+1:word:0.4'
1.536711 Gtype    b'lemma:pk4854'
1.536711 Gtype    b'word:PK4854'
1.525818 Air      b'postag:JJ'
1.520253 O        b'-1:lemma:nh4cl'
1.507575 Supp     b'lemma:rifampicin'
1.507575 Supp     b'word:rifampicin'
1.503739 Supp     b'lemma:arginine'
1.500133 Anti     b'lemma:\xcf\x8332'
1.500133 Anti     b'word:\xcf\x8332'
1.496712 Anti     b'lemma:none'
1.496712 Anti     b'word:none'
1.495312 Supp     b'+1:lemma:Deficient'
1.489615 Air      b'lemma:anaeroibc'
1.489615 Air      b'word:Anaeroibc'
1.479896 O        b'word:OmpR'
1.479448 Anti     b'lemma:seqa'
1.479448 Anti     b'word:SeqA'
1.476757 Gtype    b'hUpper'
1.470330 Substrain b'lemma:mg1655star'
1.470330 Substrain b'word:MG1655star'
1.466670 Supp     b'-1:lemma:+'
1.466670 Supp     b'-1:word:+'
1.464360 Med      b'lemma:media'
1.464360 Med      b'word:media'
1.461100 Agit     b'+1:lemma:rpm'
1.461100 Agit     b'+1:word:rpm'
1.447936 Supp     b'lemma:Adenine'
1.447936 Supp     b'word:Adenine'
1.415811 Med      b'-1:word:ml'
1.411216 Technique b'word:ChIP-Seq'
1.411125 Med      b'-1:lemma:ml'
1.410253 Supp     b'-1:lemma:vol'
1.410253 Supp     b'-1:word:vol'
1.407887 Supp     b'-1:lemma:with'
1.407887 Supp     b'-1:word:with'
1.398209 Agit     b'lemma:rpm'
1.398209 Agit     b'word:rpm'
1.393494 Technique b'lemma:rnaseq'
1.393494 Technique b'word:RNASeq'
1.390360 Gtype    b'lemma:arca8myc'
1.390360 Gtype    b'word:ArcA8myc'
1.389188 Supp     b'+1:lemma:iptg'
1.389188 Supp     b'+1:word:IPTG'
1.385517 Gtype    b'-1:lemma:\xe2\x88\x86'
1.385517 Gtype    b'-1:word:\xe2\x88\x86'
1.382474 O        b'+1:lemma:od600'
1.382474 O        b'+1:word:OD600'
1.375224 Med      b'+1:lemma:minimal'
1.375224 Med      b'+1:word:minimal'
1.366115 Supp     b'lemma:glucose'
1.366115 Supp     b'word:glucose'
1.364431 O        b'lemma:ompr'
1.361126 Supp     b'lemma:Leu'
1.361126 Supp     b'word:Leu'
1.356443 Agit     b'-1:lemma:250'
1.356443 Agit     b'-1:word:250'
1.356240 Temp     b'-1:lemma:37'
1.356240 Temp     b'-1:word:37'
1.351391 O        b'word:Lrp'
1.343607 Med      b'lemma:medium'
1.343607 Med      b'word:medium'
1.339934 O        b'lemma:trpr'
1.339934 O        b'word:TrpR'
1.336065 Supp     b'+1:word:hours'
1.333663 Technique b'lemma:rna-seq'
1.322178 O        b'word:C'
1.312096 Gversion b'postag:NN'
1.309588 O        b'+1:word:WT'
1.309216 O        b'lemma:genotype/variation'
1.309216 O        b'word:genotype/variation'
1.301103 Supp     b'lemma:acetate'
1.301103 Supp     b'word:acetate'
1.299504 Gversion b'lemma:nc'
1.299504 Gversion b'word:NC'
1.286197 Gtype    b'lemma:wild-type'
1.283611 Gversion b'lemma:000913'
1.283611 Gversion b'word:000913'
1.283453 Temp     b'lemma:43'
1.283453 Temp     b'word:43'
1.282208 O        b'lemma:a'
1.279821 Gtype    b'-1:lemma:nsrr'
1.279821 Gtype    b'+1:lemma:flagtag'
1.279821 Gtype    b'-1:word:NsrR'
1.279821 Gtype    b'+1:word:Flagtag'
1.277852 O        b'lemma:argr'
1.277852 O        b'word:ArgR'
1.277852 Gtype    b'-1:postag:VBP'
1.274259 Technique b'hLower'
1.263801 O        b'+1:lemma:wt'
1.255509 OD       b'+1:postag:IN'
1.247800 Temp     b'+1:lemma:\xc2\xb0c'
1.247800 Temp     b'+1:word:\xc2\xb0C'
1.245941 Technique b'-1:lemma:_'
1.245941 Technique b'-1:word:_'
1.244257 O        b'+1:lemma:k-12'
1.244257 O        b'+1:word:K-12'
1.243697 O        b'lemma::'
1.243697 O        b'word::'
1.238126 O        b'+1:lemma:250'
1.238126 O        b'+1:word:250'
1.237159 Med      b'lemma:m63'
1.237159 Med      b'word:M63'
1.236283 O        b'postag:VBN'
1.228688 Temp     b'-1:lemma:43'
1.228688 Temp     b'-1:word:43'
1.225230 O        b'+1:word:were'
1.216540 Med      b'postag:NNP'
1.210558 Temp     b'-1:lemma:sample'
1.209281 Gversion b'-1:lemma:nc'
1.209281 Gversion b'+1:lemma:000913'
1.209281 Gversion b'-1:word:NC'
1.209281 Gversion b'+1:word:000913'
1.207662 Temp     b'lemma:\xc2\xb0c'
1.207662 Temp     b'word:\xc2\xb0C'
1.204345 OD       b'lemma:od450'
1.204345 OD       b'word:OD450'
1.204345 OD       b'-1:word:At'
1.200676 O        b'+1:lemma:43'
1.200676 O        b'+1:word:43'
1.199367 O        b'lemma:or'
1.199367 O        b'word:or'
1.197554 Gtype    b'lemma:\xe2\x88\x86'
1.197554 Gtype    b'word:\xe2\x88\x86'
1.196612 Gtype    b'lemma:deltaseqa'
1.196612 Gtype    b'-1:lemma:old'
1.196612 Gtype    b'word:deltaSeqA'
1.196612 Gtype    b'-1:word:old'
1.192203 O        b'+2:ner:KWSUPP'
1.182538 Temp     b'-1:word:sample'
1.182165 Substrain b'-1:lemma:.'
1.182165 Substrain b'-1:postag:.'
1.182165 Substrain b'-1:word:.'
1.181852 O        b'word:for'
1.180600 Phase    b'-1:lemma:mid-log'
1.180600 Phase    b'-1:word:mid-log'
1.179642 Supp     b'+1:lemma:1'
1.179642 Supp     b'+1:word:1'
1.179001 Gtype    b'lemma:WT'
1.174451 Gversion b'lemma:u00096'
1.174451 Gversion b'+1:lemma:.2'
1.174451 Gversion b'word:U00096'
1.174451 Gversion b'+1:word:.2'
1.170704 O        b'lemma:for'
1.165715 Med      b'+1:lemma:2.0'
1.165715 Med      b'+1:word:2.0'
1.165492 Vess     b'+1:lemma:at'
1.165492 Vess     b'+1:word:at'
1.155904 Gversion b'lemma:.2'
1.155904 Gversion b'-1:lemma:u00096'
1.155904 Gversion b'word:.2'
1.155904 Gversion b'-1:word:U00096'
1.152027 Supp     b'+1:lemma:deficient'
1.147935 Med      b'-1:lemma:minimal'
1.147935 Med      b'-1:word:minimal'
1.147784 O        b'lemma:chip'
1.145760 Gtype    b'hLower'
1.144313 O        b'+1:word:ChIP-Seq'
1.143699 O        b'-1:lemma:anaerobic'
1.142131 Substrain b'+1:lemma:phtpg'
1.142131 Substrain b'+1:word:PhtpG'
1.139412 Gtype    b'lemma:\xce\xb4fur'
1.139412 Gtype    b'word:\xce\x94fur'
1.133935 Technique b'+1:postag:NN'
1.133900 O        b'lemma:soxr'
1.133900 O        b'word:SoxR'
1.133900 O        b'lemma:soxs'
1.133900 O        b'word:SoxS'
1.118612 OD       b'-1:lemma:at'
1.115981 O        b'-1:lemma:into'
1.115981 O        b'-1:word:into'
1.114274 O        b'-1:lemma:media'
1.114274 O        b'-1:word:media'
1.113783 Anti     b'hGreek'
1.111715 O        b'-1:lemma:ChIP-exo'
1.110608 Med      b'-1:postag:JJ'
1.109330 Supp     b'lemma:Trp'
1.109330 Supp     b'word:Trp'
1.107560 O        b'-1:lemma:acetate'
1.107560 O        b'-1:word:acetate'
1.103884 O        b'+1:lemma:0.2'
1.103884 O        b'+1:word:0.2'
1.100604 O        b'lemma:affyexp'
1.100604 O        b'word:affyexp'
1.093536 O        b'-1:lemma:nacl'
1.093536 O        b'-1:word:NaCl'
1.093203 Gtype    b'-1:lemma:_'
1.093203 Gtype    b'-1:word:_'
1.089655 Supp     b'word:NH4Cl'
1.089182 Supp     b'+1:lemma:2'
1.089182 Supp     b'+1:word:2'
1.076368 Gtype    b'postag:JJ'
1.072407 Supp     b'+1:lemma:hour'
1.069183 Gtype    b'+1:lemma:pq'
1.069183 Gtype    b'+1:word:PQ'
1.060688 OD       b'lemma:0.3'
1.060688 OD       b'word:0.3'
1.057074 Supp     b'-1:word:OmpR'
1.054800 pH       b'-1:postag:NN'
1.053121 Strain   b'-1:lemma:.'
1.053121 Strain   b'-1:postag:.'
1.053121 Strain   b'-1:word:.'
1.047549 O        b'+1:lemma:\xe2\x88\x86'
1.047549 O        b'+1:word:\xe2\x88\x86'
1.046470 Agit     b'lemma:250'
1.046470 Agit     b'word:250'
1.045397 Supp     b'-1:postag:CD'
1.037571 Gtype    b'lemma:\xce\xb4cra'
1.036449 Gtype    b'lemma:delta-fnr'
1.036449 Gtype    b'word:delta-fnr'
1.035771 O        b'lemma:+'
1.035771 O        b'word:+'
1.034750 O        b'+1:postag:RB'
1.028084 Gtype    b'+1:lemma:control'
1.028084 Gtype    b'+1:word:control'
1.025755 Temp     b'-1:lemma:\xcf\x8332'
1.025755 Temp     b'-1:word:\xcf\x8332'
1.024939 Gtype    b'-1:lemma:wild'
1.024939 Gtype    b'-1:word:wild'
1.024722 Phase    b'-1:lemma:until'
1.024722 Phase    b'-1:word:until'
1.024704 O        b'postag:DT'
1.018959 Air      b'-1:lemma:_'
1.018959 Air      b'-1:word:_'
1.015177 Supp     b'word:Arginine'
1.014465 Technique b'-1:lemma:chip-exo'
1.014012 OD       b'-1:lemma:od450'
1.014012 OD       b'-1:word:OD450'
1.013767 Supp     b'lemma:fructose'
1.013767 Supp     b'word:fructose'
1.012107 Gtype    b'lemma:nsrr'
1.012107 Gtype    b'word:NsrR'
1.011320 Air      b'lemma:Anaerobic'
1.008091 O        b'lemma:s'
1.008091 O        b'word:S'
1.004508 Phase    b'isLower'
1.002472 Technique b'+1:lemma:rna-seq'
1.002472 Technique b'+1:word:RNA-seq'
1.000655 Supp     b'postag:NNP'
0.999125 OD       b'+1:lemma:of'
0.999125 OD       b'+1:word:of'
0.998869 O        b'+1:lemma:aerobically'
0.998869 O        b'+1:word:aerobically'
0.995820 Gtype    b'-1:lemma:rpob'
0.995820 Gtype    b'-1:word:RpoB'
0.994530 Supp     b'-1:lemma:contain'
0.994530 Supp     b'-1:word:containing'
0.987894 O        b'lemma:culture'
0.984160 O        b'-1:lemma:wt'
0.979996 O        b'+1:lemma:coli'
0.979996 O        b'+1:word:coli'
0.973888 Gtype    b'+1:lemma:_'
0.973888 Gtype    b'+1:word:_'
0.973825 Gtype    b'+1:lemma:with'
0.973825 Gtype    b'+1:word:with'
0.972624 O        b'-1:lemma:type'
0.972624 O        b'-1:word:type'
0.972365 Supp     b'-1:postag:IN'
0.969917 O        b'-1:word:fnr'
0.967567 O        b'-1:lemma:phase'
0.967567 O        b'-1:word:phase'
0.965105 Gtype    b'lemma:fnr8myc'
0.965105 Gtype    b'word:Fnr8myc'
0.963768 Med      b'lemma:glucose'
0.963768 Med      b'word:glucose'
0.961380 Gtype    b'lemma:flagtag'
0.961380 Gtype    b'word:Flagtag'
0.959676 Gtype    b'word:\xce\x94cra'
0.956387 O        b'lemma:contain'
0.956387 O        b'word:containing'
0.953810 Substrain b'postag:NN'
0.953694 Gtype    b'+1:word:the'
0.953154 O        b'lemma:harbor'
0.953154 O        b'word:harboring'
0.951302 Anti     b'+1:lemma:antibody'
0.951302 Anti     b'+1:word:antibody'
0.950346 Supp     b'+1:lemma:mm'
0.950346 Supp     b'+1:word:mM'
0.950346 Supp     b'+1:ner:KWSUPP'
0.948410 Supp     b'word:NH4CL'
0.948051 O        b'postag:CC'
0.947030 Technique b'word:RNA-Seq'
0.945610 O        b'-1:lemma:fructose'
0.945610 O        b'-1:word:fructose'
0.942380 Vess     b'+1:postag:IN'
0.941693 O        b'+1:lemma:mid-log'
0.941693 O        b'+1:word:mid-log'
0.940892 O        b'-1:word:ChIP-exo'
0.940095 Med      b'+1:postag:CD'
0.939455 O        b'+1:lemma:fnr-8myc'
0.939455 O        b'+1:word:Fnr-8myc'
0.936017 Gtype    b'lemma:ptac'
0.936017 Gtype    b'word:Ptac'
0.935849 O        b'-1:word:grown'
0.933140 OD       b'+1:postag:JJ'
0.931460 Gtype    b'-1:lemma:from'
0.931460 Gtype    b'-1:word:from'
0.929537 Gversion b'-1:postag:DT'
0.925875 O        b'-1:lemma:stpa'
0.925875 O        b'-1:word:stpA'
0.924870 O        b'-1:lemma:no3'
0.924870 O        b'-1:word:NO3'
0.924548 Gtype    b'lemma:wild'
0.924548 Gtype    b'word:wild'
0.923074 Gtype    b'+1:lemma:the'
0.922513 Gversion b'+1:lemma:genome'
0.922513 Gversion b'+1:word:genome'
0.921557 O        b'-1:lemma:-80'
0.921557 O        b'-1:word:-80'
0.915104 Gtype    b'-1:lemma:ptac'
0.915104 Gtype    b'-1:word:Ptac'
0.913785 Anti     b'-1:lemma::'
0.913785 Anti     b'-1:word::'
0.913692 Med      b'isUpper'
0.912849 O        b'lemma:2-3'
0.912849 O        b'word:2-3'
0.912824 Air      b'-1:postag::'
0.905098 Gtype    b'lemma:phtpg'
0.905098 Gtype    b'word:PhtpG'
0.902896 Air      b'-1:lemma:ryhb'
0.902896 Air      b'-1:word:ryhB'
0.902090 Technique b'+1:lemma:chip-exo'
0.901654 Gversion b'lemma:_'
0.901654 Gversion b'word:_'
0.898817 O        b'-1:lemma:grow'
0.891389 Technique b'lemma:ChIP-Seq'
0.890459 O        b'word:GadX'
0.889611 OD       b'-1:lemma:~'
0.889611 OD       b'-1:word:~'
0.889077 pH       b'+1:lemma:5.5'
0.889077 pH       b'+1:word:5.5'
0.888508 Technique b'-1:lemma:IP'
0.888508 Technique b'-1:word:IP'
0.887008 O        b'lemma:gadx'
0.885888 Supp     b'+1:lemma:_'
0.885888 Supp     b'+1:word:_'
0.885870 O        b'+1:lemma:ph5'
0.885870 O        b'+1:word:pH5'
0.883018 Anti     b'+1:postag:NN'
0.882449 O        b'+1:postag:VBN'
0.878483 Technique b'-1:lemma:rna-seq'
0.878483 Technique b'-1:word:RNA-seq'
0.877144 O        b'-1:lemma:min'
0.877144 O        b'-1:word:min'
0.874640 Temp     b'isNumber'
0.872219 O        b'lemma:input'
0.872219 O        b'+1:lemma:chip-seq'
0.872219 O        b'word:Input'
0.871289 Anti     b'+1:postag:-LRB-'
0.868591 O        b'+1:lemma:30'
0.868591 O        b'+1:word:30'
0.867212 O        b'word:at'


Top negative:
-0.070023 Temp     b'postag:NN'
-0.070795 Phase    b'-1:word:at'
-0.071304 Phase    b'+1:postag:NN'
-0.071767 Phase    b'+2:ner:_'
-0.072398 Technique b'+2:ner:_'
-0.073857 Supp     b'+1:lemma:-rrb-'
-0.073857 Supp     b'+1:word:-RRB-'
-0.074321 O        b'word:NH4Cl'
-0.075411 Gtype    b'postag:CD'
-0.075597 Temp     b'-1:ner:_'
-0.075787 Air      b'isUpper'
-0.077184 Phase    b'isNumber'
-0.078068 Vess     b'+1:ner:_'
-0.078498 pH       b'hGreek'
-0.079143 O        b'lemma:glucose'
-0.079143 O        b'word:glucose'
-0.079178 O        b'+1:lemma:b'
-0.079178 O        b'+1:word:B'
-0.079714 O        b'word:tag'
-0.079861 O        b'+1:lemma:~'
-0.079861 O        b'+1:word:~'
-0.083030 Supp     b'lemma:,'
-0.083030 Supp     b'postag:,'
-0.083030 Supp     b'word:,'
-0.083116 O        b'+1:postag:FW'
-0.084709 Air      b'postag:CD'
-0.085087 Temp     b'hUpper'
-0.086006 O        b'lemma:7.6'
-0.086006 O        b'+1:lemma:;'
-0.086006 O        b'word:7.6'
-0.086006 O        b'+1:word:;'
-0.087577 Gtype    b'isGreek'
-0.091846 Supp     b'-1:lemma:250'
-0.091846 Supp     b'-1:word:250'
-0.092292 Supp     b'postag:IN'
-0.096546 O        b'-1:lemma:harbor'
-0.096546 O        b'-1:word:harboring'
-0.097001 O        b'-1:lemma:Fur'
-0.097001 O        b'-1:word:Fur'
-0.098577 Supp     b'+2:ner:KWSUPP'
-0.099897 O        b'-1:lemma:final'
-0.099897 O        b'-1:word:final'
-0.103011 O        b'lemma:8'
-0.103011 O        b'word:8'
-0.104313 Phase    b'-1:lemma:at'
-0.104344 Air      b'isLower'
-0.105942 Supp     b'+1:postag:-RRB-'
-0.108206 Supp     b'-1:lemma:and'
-0.108206 Supp     b'-1:word:and'
-0.108427 O        b'+1:word:Aerobic'
-0.108507 O        b'-1:lemma:gadw'
-0.109966 O        b'word:anaerobic'
-0.112228 O        b'+1:word:Anaerobic'
-0.112600 Gtype    b'+1:lemma:b'
-0.112600 Gtype    b'+1:word:B'
-0.115369 O        b'-1:lemma:delta'
-0.115369 O        b'-1:word:delta'
-0.115753 O        b'lemma:n2'
-0.115753 O        b'word:N2'
-0.117573 O        b'+1:lemma:until'
-0.117573 O        b'+1:word:until'
-0.117816 O        b'lemma:\xc3\x9f'
-0.117816 O        b'word:\xc3\x9f'
-0.120627 Supp     b'lemma:-lrb-'
-0.120627 Supp     b'word:-LRB-'
-0.121098 Anti     b'isLower'
-0.121403 Strain   b'isLower'
-0.121411 O        b'+1:word:purified'
-0.123133 Gtype    b'+1:postag:NNS'
-0.124400 O        b'+1:lemma:delta'
-0.124400 O        b'+1:word:delta'
-0.124678 O        b'+1:lemma:.'
-0.124678 O        b'+1:postag:.'
-0.124678 O        b'+1:word:.'
-0.125271 O        b'+1:lemma:0.3'
-0.125271 O        b'+1:word:0.3'
-0.127002 O        b'+1:lemma:ph'
-0.127002 O        b'+1:word:pH'
-0.131978 O        b'postag:NN'
-0.134647 O        b'+1:lemma:fecl2'
-0.134647 O        b'+1:word:FeCl2'
-0.135295 O        b'+1:lemma:of'
-0.135295 O        b'+1:word:of'
-0.135770 O        b'lemma:o2'
-0.135770 O        b'word:O2'
-0.135946 O        b'-1:lemma:iptg'
-0.135946 O        b'-1:word:IPTG'
-0.136458 O        b'-1:lemma:minimal'
-0.136458 O        b'-1:word:minimal'
-0.136842 O        b'lemma:dissolve'
-0.136842 O        b'word:dissolved'
-0.139344 Gversion b'hGreek'
-0.140164 O        b'-1:lemma:0.2'
-0.140164 O        b'-1:word:0.2'
-0.140380 O        b'-1:lemma:gadx'
-0.141497 O        b'-1:lemma:sodium'
-0.141497 O        b'-1:word:Sodium'
-0.144345 O        b'-1:word:\xce\x94cra'
-0.145036 O        b'postag:NNP'
-0.145471 O        b'-1:lemma:affinity'
-0.146350 O        b'lemma:1m'
-0.146350 O        b'word:1M'
-0.146451 Strain   b'+2:ner:_'
-0.147210 O        b'+1:postag:VB'
-0.147930 O        b'+1:lemma:5'
-0.147930 O        b'+1:word:5'
-0.152715 Supp     b'postag:-LRB-'
-0.154416 Vess     b'symb'
-0.155112 O        b'-1:lemma:purify'
-0.157899 O        b'-1:lemma:n2'
-0.157899 O        b'-1:word:N2'
-0.158215 Supp     b'postag:CC'
-0.158911 Supp     b'lemma:10'
-0.158911 Supp     b'word:10'
-0.162385 O        b'+1:lemma:2.0'
-0.162385 O        b'+1:word:2.0'
-0.164197 Substrain b'+2:ner:_'
-0.165513 O        b'lemma:\xce\xb4ompr'
-0.165513 O        b'word:\xce\x94ompR'
-0.168967 O        b'word:purified'
-0.170321 O        b'+1:lemma:purify'
-0.170595 O        b'-1:lemma:the'
-0.170797 Anti     b'hUpper'
-0.171504 O        b'lemma:ph'
-0.171504 O        b'word:pH'
-0.172689 O        b'+1:lemma:-rrb-'
-0.172689 O        b'+1:word:-RRB-'
-0.173506 O        b'-1:lemma:control'
-0.173506 O        b'-1:word:control'
-0.174077 O        b'lemma:od600'
-0.174077 O        b'word:OD600'
-0.176462 O        b'-1:word:for'
-0.182159 Substrain b'+1:ner:_'
-0.185610 O        b'-1:lemma:o2'
-0.185610 O        b'-1:word:O2'
-0.186782 O        b'lemma:\xce\xb4soxr'
-0.186782 O        b'word:\xce\x94soxR'
-0.186836 Vess     b'isNumber'
-0.186977 Supp     b'lemma:paraquat'
-0.186977 Supp     b'word:paraquat'
-0.186990 O        b'lemma:20'
-0.186990 O        b'word:20'
-0.187844 Phase    b'-2:ner:SUPP'
-0.188723 O        b'-1:lemma:.'
-0.188723 O        b'-1:postag:.'
-0.188723 O        b'-1:word:.'
-0.189156 O        b'-1:lemma:g/l'
-0.189156 O        b'-1:word:g/L'
-0.189289 Supp     b'lemma:300'
-0.189289 Supp     b'word:300'
-0.189850 O        b'-1:postag:VB'
-0.190062 Gversion b'isUpper'
-0.190494 O        b'-1:postag:CD'
-0.191216 O        b'-1:lemma:of'
-0.191216 O        b'-1:word:of'
-0.194934 O        b'lemma:\xe2\x88\x86'
-0.194934 O        b'word:\xe2\x88\x86'
-0.195391 O        b'lemma:co2'
-0.195391 O        b'word:CO2'
-0.195840 Med      b'+1:lemma:m9'
-0.195840 Med      b'+1:word:M9'
-0.203181 O        b'lemma:m63'
-0.203181 O        b'word:M63'
-0.203533 O        b'+1:lemma:\xc2\xb0c'
-0.203533 O        b'+1:word:\xc2\xb0C'
-0.205873 O        b'+2:ner:TF'
-0.206535 O        b'lemma:methanol'
-0.206535 O        b'word:methanol'
-0.207516 O        b'+1:lemma:rna'
-0.207516 O        b'+1:word:RNA'
-0.207570 Med      b'+1:postag:CC'
-0.208933 Supp     b'+1:postag::'
-0.209813 Phase    b'hGreek'
-0.210693 O        b'lemma:rna'
-0.210693 O        b'word:RNA'
-0.210832 O        b'+1:lemma:min'
-0.210832 O        b'+1:word:min'
-0.211014 Strain   b'-2:ner:_'
-0.212688 O        b'-1:lemma:~'
-0.212688 O        b'-1:word:~'
-0.214400 Agit     b'-1:ner:_'
-0.216428 Temp     b'symb'
-0.216847 O        b'-1:ner:SUPP'
-0.217948 Gtype    b'+1:lemma:and'
-0.217948 Gtype    b'+1:word:and'
-0.221691 Vess     b'-1:ner:_'
-0.221756 Supp     b'+2:ner:_'
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