line-plots-CRF-v1.0.R
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# Based on http://www.sthda.com/english/wiki/ggplot2-line-plot-quick-start-guide-r-software-and-data-visualization
library(ggplot2)
#library(ggpubr)
#library(cowplot)
######### BEST MODELS ##########
# Run1
# Todas las condiciones
dfa <- data.frame(Measure=rep(c("Precision", "Recall", "F1-score"), each=15),
Strategy=rep(c(
"Agit",
"Gversion",
"Substrain",
"Vess",
"OD",
"Anti",
"Supp",
"Air",
"Gtype",
"Med",
"Temp",
"Technique",
"Phase",
"pH",
"Strain"
),3),
Score=c(
0,
0,
0,
0,
1,
1,
0.883,
0.92,
0.905,
0.852,
0.818,
0.88,
1,
1,
1,
0,
0,
0,
0,
0.405,
0.444,
0.669,
0.742,
0.811,
0.912,
1,
1,
0.947,
1,
1,
0,
0,
0,
0,
0.577,
0.615,
0.762,
0.821,
0.856,
0.881,
0.9,
0.936,
0.973,
1,
1
))
# Solo condiciones con F1-score > 0
# Run 1
df <- data.frame(Measure=rep(c("Precision", "Recall", "F1-score"), each=11),
Strategy=rep(c(
"OD",
"Anti",
"Supp",
"Air",
"Gtype",
"Med",
"Temp",
"Technique",
"Phase",
"pH",
"Strain"
),3),
Score=c(
1,
1,
0.883,
0.92,
0.905,
0.852,
0.818,
0.88,
1,
1,
1,
0.405,
0.444,
0.669,
0.742,
0.811,
0.912,
1,
1,
0.947,
1,
1,
0.577,
0.615,
0.762,
0.821,
0.856,
0.881,
0.9,
0.936,
0.973,
1,
1
))
head(df)
pa<-ggplot(df, aes(x=Strategy, y=Score, group=Measure)) +
geom_line(aes(color=Measure))+
geom_point(aes(color=Measure))+
scale_color_manual(values=c("#999999", "#E69F00", "#56B4E9"))+
#scale_color_manual(values=c("#e6194b", "#3cb44b", "#0082c8"))+
#geom_text(aes(label = Score))+
labs(title="Scores by condition (Best model, Run1)",x="Condition", y = "Score")+
theme(
legend.position="top",
# Centrar título: plot.title = element_text(hjust = 0.5),
axis.line = element_line(colour = "gray"),
panel.background = element_blank(),
panel.grid.major = element_blank(),
panel.grid.minor = element_blank(),
panel.border = element_blank()
)
pa
ggsave(".png")
# Solo condiciones con F1-score > 0
# Run 7
df <- data.frame(Measure=rep(c("Precision", "Recall", "F1-score"), each=11),
Strategy=rep(c(
"Anti",
"OD",
"Supp",
"Air",
"Gtype",
"Temp",
"Med",
"Technique",
"Phase",
"pH",
"Strain"
),3),
Score=c(
0.571,
1,
0.886,
0.939,
0.876,
0.818,
0.897,
0.952,
1,
1,
1,
0.444,
0.405,
0.684,
0.742,
0.802,
1,
0.912,
0.909,
0.947,
1,
1,
0.5,
0.577,
0.772,
0.829,
0.837,
0.9,
0.904,
0.93,
0.973,
1,
1
))
head(df)
pa<-ggplot(df, aes(x=Strategy, y=Score, group=Measure)) +
geom_line(aes(color=Measure))+
geom_point(aes(color=Measure))+
scale_color_manual(values=c("#999999", "#E69F00", "#56B4E9"))+
#scale_color_manual(values=c("#e6194b", "#3cb44b", "#0082c8"))+
#geom_text(aes(label = Score))+
labs(title="Scores by condition (Best model, Run7)",x="Condition", y = "Score")+
theme(
legend.position="top",
# Centrar título: plot.title = element_text(hjust = 0.5),
axis.line = element_line(colour = "gray"),
panel.background = element_blank(),
panel.grid.major = element_blank(),
panel.grid.minor = element_blank(),
panel.border = element_blank()
)
pa
ggsave(".png")