********** TRAINING AND TESTING REPORT **********
Training file: training-data-set-70-NER.txt

best params:{'c1': 0.01236671095508829, 'c2': 0.031308289278128225}
best CV score:0.8172882049457899
model size: 0.18M

Flat F1: 0.8042943081144248
             precision    recall  f1-score   support

         OD      1.000     1.000     1.000        21
         pH      1.000     1.000     1.000        10
  Technique      1.000     1.000     1.000        33
        Med      1.000     0.821     0.902        56
       Temp      0.857     0.800     0.828        15
       Vess      0.000     0.000     0.000         0
       Agit      0.000     0.000     0.000         7
      Phase      1.000     0.762     0.865        21
        Air      0.590     0.557     0.573        88
       Anti      0.692     0.692     0.692        13
     Strain      0.000     0.000     0.000         0
      Gtype      0.938     0.769     0.845        78
  Substrain      0.000     0.000     0.000         0
       Supp      0.851     0.838     0.844       136
   Gversion      1.000     0.500     0.667         6

avg / total      0.846     0.771     0.804       484


Top likely transitions:
Gtype  -> Gtype   4.935611
Temp   -> Temp    4.930456
Supp   -> Supp    4.915657
Med    -> Med     4.756375
Anti   -> Anti    4.675604
Air    -> Air     4.162143
O      -> O       4.121582
Phase  -> Phase   4.042941
OD     -> OD      3.994171
Gversion -> Gversion 3.754308
pH     -> pH      2.748439
Technique -> Technique 2.666556
Agit   -> Agit    1.884579
Substrain -> Gtype   1.499213
O      -> Gtype   0.782820
Technique -> Air     0.729140
O      -> Technique 0.646737
Gtype  -> Supp    0.629814
O      -> Supp    0.431955
Air    -> O       0.377311
Strain -> O       0.172639
Gtype  -> pH      0.166420
Temp   -> O       0.115492
O      -> pH      0.087613
O      -> Strain  0.069296
O      -> Phase   0.018728
Gtype  -> Air     0.012957
Gtype  -> Agit    -0.000054
Strain -> Supp    -0.000331
pH     -> Temp    -0.000976
Phase  -> Gversion -0.008521
Supp   -> Agit    -0.011798
Technique -> Anti    -0.011809
OD     -> Agit    -0.024554
Vess   -> O       -0.028108
Air    -> Gversion -0.030561
Agit   -> Technique -0.040420
pH     -> OD      -0.047164
Substrain -> Supp    -0.051136
Med    -> pH      -0.051584
Anti   -> Air     -0.055407
Anti   -> pH      -0.058865
Phase  -> Air     -0.063725
Supp   -> Vess    -0.066294
Strain -> Gtype   -0.071590
Supp   -> O       -0.072719
Temp   -> Gtype   -0.074675
O      -> Temp    -0.077579
Gversion -> OD      -0.079069
pH     -> O       -0.081270
Technique -> Agit    -0.085057
Technique -> Temp    -0.086561
Air    -> Gtype   -0.089593
pH     -> Air     -0.091207
Gversion -> Gtype   -0.093564
Gtype  -> Substrain -0.094848
Gversion -> Technique -0.099276
Anti   -> OD      -0.099957
Med    -> Gtype   -0.102118
Temp   -> Supp    -0.104293
OD     -> Gtype   -0.120891
Temp   -> OD      -0.121665
O      -> Anti    -0.124992
Phase  -> Temp    -0.125185
Anti   -> Technique -0.125330
Med    -> OD      -0.139954
Temp   -> Air     -0.155152
O      -> Gversion -0.160414
OD     -> pH      -0.164285
Gversion -> Air     -0.173614
Agit   -> Supp    -0.174620
O      -> Substrain -0.189365
Phase  -> Anti    -0.202379
Supp   -> pH      -0.206189
Med    -> Temp    -0.209476
Anti   -> Phase   -0.213262
Supp   -> Phase   -0.229783
Phase  -> Gtype   -0.231233
Supp   -> Gversion -0.262681
pH     -> Supp    -0.270166
Technique -> Med     -0.278689
Anti   -> Gtype   -0.286053
Supp   -> Anti    -0.289991
Air    -> Technique -0.291723
Supp   -> Gtype   -0.301145
Technique -> Gversion -0.301974
OD     -> Temp    -0.302334
Med    -> Air     -0.302539
Supp   -> Air     -0.310667
Supp   -> Technique -0.312849
Med    -> Technique -0.322715
Supp   -> OD      -0.327649
Anti   -> O       -0.327747
Supp   -> Temp    -0.331544
Agit   -> Air     -0.376882
Gversion -> Supp    -0.383993
Anti   -> Med     -0.392069
OD     -> Technique -0.396318
Air    -> OD      -0.397774
Gtype  -> OD      -0.402067
Technique -> Supp    -0.410967
Anti   -> Supp    -0.413835
Gtype  -> Temp    -0.425927
Air    -> Med     -0.431217
Gtype  -> Gversion -0.445382
Gtype  -> Technique -0.470846
Phase  -> Supp    -0.474315
Gtype  -> Phase   -0.475865
Phase  -> Med     -0.520492
Air    -> Temp    -0.527884
OD     -> Med     -0.539056
OD     -> Supp    -0.540231
OD     -> O       -0.559139
Gversion -> O       -0.596757
Med    -> O       -0.605465
Phase  -> OD      -0.609796
Air    -> Supp    -0.694235
Technique -> OD      -0.713299
Gtype  -> Med     -0.720340
Air    -> Phase   -0.737763
Gtype  -> Anti    -0.767345
Technique -> Gtype   -0.767914
Phase  -> Technique -0.774933
Anti   -> Temp    -0.804513
Phase  -> O       -0.828169
O      -> OD      -0.849548
Air    -> Agit    -0.938502
Temp   -> Med     -0.956167
Gtype  -> O       -0.971487
OD     -> Air     -1.024993
Technique -> O       -1.075169
O      -> Med     -1.206488
Substrain -> O       -1.345715
O      -> Air     -1.483656
Technique -> pH      -1.504523
Supp   -> Med     -1.775483
Med    -> Supp    -2.005236


Top unlikely transitions:
Gtype  -> Gtype   4.935611
Temp   -> Temp    4.930456
Supp   -> Supp    4.915657
Med    -> Med     4.756375
Anti   -> Anti    4.675604
Air    -> Air     4.162143
O      -> O       4.121582
Phase  -> Phase   4.042941
OD     -> OD      3.994171
Gversion -> Gversion 3.754308
pH     -> pH      2.748439
Technique -> Technique 2.666556
Agit   -> Agit    1.884579
Substrain -> Gtype   1.499213
O      -> Gtype   0.782820
Technique -> Air     0.729140
O      -> Technique 0.646737
Gtype  -> Supp    0.629814
O      -> Supp    0.431955
Air    -> O       0.377311
Strain -> O       0.172639
Gtype  -> pH      0.166420
Temp   -> O       0.115492
O      -> pH      0.087613
O      -> Strain  0.069296
O      -> Phase   0.018728
Gtype  -> Air     0.012957
Gtype  -> Agit    -0.000054
Strain -> Supp    -0.000331
pH     -> Temp    -0.000976
Phase  -> Gversion -0.008521
Supp   -> Agit    -0.011798
Technique -> Anti    -0.011809
OD     -> Agit    -0.024554
Vess   -> O       -0.028108
Air    -> Gversion -0.030561
Agit   -> Technique -0.040420
pH     -> OD      -0.047164
Substrain -> Supp    -0.051136
Med    -> pH      -0.051584
Anti   -> Air     -0.055407
Anti   -> pH      -0.058865
Phase  -> Air     -0.063725
Supp   -> Vess    -0.066294
Strain -> Gtype   -0.071590
Supp   -> O       -0.072719
Temp   -> Gtype   -0.074675
O      -> Temp    -0.077579
Gversion -> OD      -0.079069
pH     -> O       -0.081270
Technique -> Agit    -0.085057
Technique -> Temp    -0.086561
Air    -> Gtype   -0.089593
pH     -> Air     -0.091207
Gversion -> Gtype   -0.093564
Gtype  -> Substrain -0.094848
Gversion -> Technique -0.099276
Anti   -> OD      -0.099957
Med    -> Gtype   -0.102118
Temp   -> Supp    -0.104293
OD     -> Gtype   -0.120891
Temp   -> OD      -0.121665
O      -> Anti    -0.124992
Phase  -> Temp    -0.125185
Anti   -> Technique -0.125330
Med    -> OD      -0.139954
Temp   -> Air     -0.155152
O      -> Gversion -0.160414
OD     -> pH      -0.164285
Gversion -> Air     -0.173614
Agit   -> Supp    -0.174620
O      -> Substrain -0.189365
Phase  -> Anti    -0.202379
Supp   -> pH      -0.206189
Med    -> Temp    -0.209476
Anti   -> Phase   -0.213262
Supp   -> Phase   -0.229783
Phase  -> Gtype   -0.231233
Supp   -> Gversion -0.262681
pH     -> Supp    -0.270166
Technique -> Med     -0.278689
Anti   -> Gtype   -0.286053
Supp   -> Anti    -0.289991
Air    -> Technique -0.291723
Supp   -> Gtype   -0.301145
Technique -> Gversion -0.301974
OD     -> Temp    -0.302334
Med    -> Air     -0.302539
Supp   -> Air     -0.310667
Supp   -> Technique -0.312849
Med    -> Technique -0.322715
Supp   -> OD      -0.327649
Anti   -> O       -0.327747
Supp   -> Temp    -0.331544
Agit   -> Air     -0.376882
Gversion -> Supp    -0.383993
Anti   -> Med     -0.392069
OD     -> Technique -0.396318
Air    -> OD      -0.397774
Gtype  -> OD      -0.402067
Technique -> Supp    -0.410967
Anti   -> Supp    -0.413835
Gtype  -> Temp    -0.425927
Air    -> Med     -0.431217
Gtype  -> Gversion -0.445382
Gtype  -> Technique -0.470846
Phase  -> Supp    -0.474315
Gtype  -> Phase   -0.475865
Phase  -> Med     -0.520492
Air    -> Temp    -0.527884
OD     -> Med     -0.539056
OD     -> Supp    -0.540231
OD     -> O       -0.559139
Gversion -> O       -0.596757
Med    -> O       -0.605465
Phase  -> OD      -0.609796
Air    -> Supp    -0.694235
Technique -> OD      -0.713299
Gtype  -> Med     -0.720340
Air    -> Phase   -0.737763
Gtype  -> Anti    -0.767345
Technique -> Gtype   -0.767914
Phase  -> Technique -0.774933
Anti   -> Temp    -0.804513
Phase  -> O       -0.828169
O      -> OD      -0.849548
Air    -> Agit    -0.938502
Temp   -> Med     -0.956167
Gtype  -> O       -0.971487
OD     -> Air     -1.024993
Technique -> O       -1.075169
O      -> Med     -1.206488
Substrain -> O       -1.345715
O      -> Air     -1.483656
Technique -> pH      -1.504523
Supp   -> Med     -1.775483
Med    -> Supp    -2.005236


Top positive:
5.155924 O        b'lemma:_'
5.155924 O        b'word:_'
3.831155 Air      b'lemma:anaerobic'
3.769103 O        b'word:Cra'
3.608289 Gtype    b'word:WT'
3.279466 Gtype    b'hGreek'
3.191906 Gtype    b'lemma:wt'
3.078901 Air      b'word:Aerobic'
3.069620 Technique b'word:ChIPSeq'
3.039315 Supp     b'lemma:Iron'
3.039315 Supp     b'word:Iron'
3.039315 Supp     b'+1:word:Deficient'
2.989778 Air      b'postag:RB'
2.984595 Supp     b'-1:word:Cra'
2.961202 Air      b'word:Anaerobic'
2.931466 Phase    b'lemma:stationary'
2.931466 Phase    b'word:stationary'
2.931466 Phase    b'lemma:exponential'
2.931466 Phase    b'word:exponential'
2.928105 Supp     b'lemma:pq'
2.928105 Supp     b'word:PQ'
2.877328 Technique b'lemma:chipseq'
2.870748 Supp     b'lemma:nh4cl'
2.760993 Phase    b'postag:NN'
2.682583 O        b'lemma:Cra'
2.579421 Technique b'word:ChIP-exo'
2.564767 Supp     b'+1:lemma:\xc2\xb5m'
2.564767 Supp     b'+1:word:\xc2\xb5M'
2.561313 Supp     b'lemma:2h'
2.561313 Supp     b'-1:lemma:additional'
2.561313 Supp     b'word:2h'
2.561313 Supp     b'-1:word:additional'
2.549332 O        b'lemma:-'
2.549332 O        b'word:-'
2.548626 O        b'postag::'
2.524220 O        b'postag:VBG'
2.480667 Supp     b'lemma:glucose'
2.480667 Supp     b'word:glucose'
2.469322 Med      b'lemma:MOPS'
2.469322 Med      b'word:MOPS'
2.459800 O        b'lemma:.'
2.459800 O        b'postag:.'
2.459800 O        b'word:.'
2.453058 O        b'+1:postag:RB'
2.431685 O        b'-1:lemma:tag'
2.416355 Air      b'lemma:aerobically'
2.416355 Air      b'word:aerobically'
2.411753 O        b'-1:lemma:lb'
2.354372 O        b'-1:word:tag'
2.322396 Med      b'word:LB'
2.321866 Gversion b'lemma:asm584v2'
2.321866 Gversion b'word:ASM584v2'
2.319425 O        b'+1:word:were'
2.308641 O        b'lemma:1'
2.308641 O        b'word:1'
2.265828 Air      b'-1:lemma:-'
2.265828 Air      b'-1:word:-'
2.240524 Supp     b'lemma:arginine'
2.200674 Strain   b'lemma:k-12'
2.200674 Strain   b'word:K-12'
2.198547 Med      b'lemma:LB'
2.156383 Supp     b'lemma:rifampicin'
2.156383 Supp     b'word:rifampicin'
2.153552 Gtype    b'lemma:arca8myc'
2.153552 Gtype    b'word:ArcA8myc'
2.104389 Technique b'lemma:ChIP-exo'
2.097766 Air      b'word:anaerobic'
2.092635 Gtype    b'-1:lemma:\xe2\x88\x86'
2.092635 Gtype    b'-1:word:\xe2\x88\x86'
2.089781 Gtype    b'lemma:type'
2.089781 Gtype    b'word:type'
2.056892 Air      b'postag:JJ'
2.038808 O        b'lemma:rep2'
2.038808 O        b'word:rep2'
2.038808 O        b'lemma:rep1'
2.038808 O        b'word:rep1'
2.036728 O        b'lemma:b'
2.036728 O        b'word:B'
2.021245 Gversion b'word:ChIP-Seq'
2.015782 Supp     b'-1:lemma:Cra'
2.012839 O        b'lemma:chip-arca'
2.012839 O        b'word:chip-ArcA'
2.012193 O        b'lemma:2'
2.012193 O        b'word:2'
2.007489 Gversion b'lemma:chip-seq'
2.007311 Air      b'lemma:anaeroibc'
2.007311 Air      b'word:Anaeroibc'
1.984486 O        b'lemma:\xcf\x8332'
1.984486 O        b'word:\xcf\x8332'
1.972567 O        b'-1:word:Anaerobic'
1.964370 Air      b'lemma:aerobic'
1.962554 Air      b'-1:lemma:ChIP-Seq'
1.962554 Air      b'-1:word:ChIP-Seq'
1.953605 O        b'postag:IN'
1.953580 O        b'lemma:chip-fnr'
1.953580 O        b'word:chip-Fnr'
1.943401 O        b'-1:lemma:0.3'
1.943401 O        b'-1:word:0.3'
1.934545 Supp     b'lemma:Fe'
1.934545 Supp     b'word:Fe'
1.933440 Gtype    b'+1:lemma:type'
1.933440 Gtype    b'+1:word:type'
1.919401 O        b'+1:lemma:pq'
1.919401 O        b'+1:word:PQ'
1.917932 Substrain b'lemma:mg1655'
1.917932 Substrain b'word:MG1655'
1.911092 Technique b'word:ChIP-Seq'
1.906875 Vess     b'lemma:flask'
1.906875 Vess     b'-1:lemma:warm'
1.906875 Vess     b'word:flask'
1.906875 Vess     b'-1:word:warmed'
1.896146 O        b'lemma:3'
1.896146 O        b'word:3'
1.894465 O        b'lemma::'
1.894465 O        b'word::'
1.888824 Supp     b'lemma:no3'
1.888824 Supp     b'word:NO3'
1.888486 O        b'word:A'
1.886273 Supp     b'+1:lemma:Deficient'
1.870410 O        b'lemma:rpob'
1.870410 O        b'word:RpoB'
1.866712 O        b'lemma:at'
1.845067 Technique b'lemma:rnaseq'
1.845067 Technique b'word:RNASeq'
1.842861 Gtype    b'lemma:pk4854'
1.842861 Gtype    b'word:PK4854'
1.835121 Supp     b'lemma:acetate'
1.835121 Supp     b'word:acetate'
1.833245 Gtype    b'lemma:delta-fnr'
1.833245 Gtype    b'word:delta-fnr'
1.826687 Gtype    b'lemma:wildtype'
1.825112 Substrain b'lemma:mg1655star'
1.825112 Substrain b'word:MG1655star'
1.822290 Med      b'+1:lemma:0.4'
1.822290 Med      b'+1:word:0.4'
1.821407 Agit     b'+1:lemma:rpm'
1.821407 Agit     b'+1:word:rpm'
1.813551 Anti     b'lemma:none'
1.813551 Anti     b'word:none'
1.808468 O        b'+1:lemma:od600'
1.808468 O        b'+1:word:OD600'
1.803302 O        b'lemma:with'
1.803302 O        b'word:with'
1.801754 O        b'-1:postag:NNS'
1.788270 Anti     b'lemma:\xcf\x8332'
1.788270 Anti     b'word:\xcf\x8332'
1.782750 pH       b'+1:postag:CD'
1.780884 Supp     b'lemma:nacl'
1.780884 Supp     b'word:NaCl'
1.764664 Temp     b'-1:lemma:37'
1.764664 Temp     b'-1:word:37'
1.758689 O        b'lemma:CEL'
1.758689 O        b'word:CEL'
1.731907 Gtype    b'lemma:dfnr'
1.731907 Gtype    b'word:dFNR'
1.724720 Vess     b'-1:postag:VBN'
1.716383 Phase    b'lemma:mid-log'
1.716383 Phase    b'word:mid-log'
1.715355 Technique b'hUpper'
1.710444 Gtype    b'lemma:fnr8myc'
1.710444 Gtype    b'word:Fnr8myc'
1.708301 Gtype    b'lemma:WT'
1.705979 O        b'word:OmpR'
1.702257 Anti     b'lemma:seqa'
1.702257 Anti     b'word:SeqA'
1.700851 Supp     b'lemma:Adenine'
1.700851 Supp     b'word:Adenine'
1.697847 O        b'word:Lrp'
1.693629 Med      b'lemma:m63'
1.693629 Med      b'word:M63'
1.692270 Med      b'+1:lemma:2.0'
1.692270 Med      b'+1:word:2.0'
1.683601 Supp     b'lemma:dpd'
1.683601 Supp     b'word:DPD'
1.676202 Supp     b'lemma:Leu'
1.676202 Supp     b'word:Leu'
1.673772 pH       b'lemma:ph5'
1.673772 pH       b'+1:lemma:.5'
1.673772 pH       b'word:pH5'
1.673772 pH       b'+1:word:.5'
1.654900 Med      b'-1:lemma:fresh'
1.654900 Med      b'-1:word:fresh'
1.654848 OD       b'+1:postag:IN'
1.632347 Gversion b'postag:NN'
1.623799 Strain   b'+1:lemma:substr'
1.623799 Strain   b'+1:word:substr'
1.607450 O        b'lemma:genotype/variation'
1.607450 O        b'word:genotype/variation'
1.604445 Med      b'lemma:medium'
1.604445 Med      b'word:medium'
1.604066 Temp     b'+1:lemma:\xc2\xb0c'
1.604066 Temp     b'+1:word:\xc2\xb0C'
1.600821 Gtype    b'lemma:\xe2\x88\x86'
1.600821 Gtype    b'word:\xe2\x88\x86'
1.598942 O        b'-1:lemma:glucose'
1.598942 O        b'-1:word:glucose'
1.597710 O        b'+1:postag:VBN'
1.593988 O        b'+1:lemma:k-12'
1.593988 O        b'+1:word:K-12'
1.593870 O        b'-1:lemma:into'
1.593870 O        b'-1:word:into'
1.589019 Temp     b'lemma:43'
1.589019 Temp     b'word:43'
1.580793 Med      b'-1:word:ml'
1.578090 Med      b'-1:lemma:ml'
1.563545 Technique b'lemma:rna-seq'
1.560361 Gtype    b'+1:postag::'
1.555260 Agit     b'lemma:rpm'
1.555260 Agit     b'word:rpm'
1.553661 O        b'+1:word:WT'
1.551444 O        b'-1:word:Aerobic'
1.548772 Supp     b'lemma:iptg'
1.548772 Supp     b'word:IPTG'
1.542194 OD       b'lemma:od450'
1.542194 OD       b'word:OD450'
1.542194 OD       b'-1:word:At'
1.535205 O        b'+1:lemma:wt'
1.534264 Gtype    b'lemma:deltaseqa'
1.534264 Gtype    b'-1:lemma:old'
1.534264 Gtype    b'word:deltaSeqA'
1.534264 Gtype    b'-1:word:old'
1.529249 Supp     b'-1:lemma:+'
1.529249 Supp     b'-1:word:+'
1.527479 O        b'word:C'
1.508030 O        b'+1:lemma:250'
1.508030 O        b'+1:word:250'
1.487477 Supp     b'+1:word:hours'
1.476902 Supp     b'-1:lemma:vol'
1.476902 Supp     b'-1:word:vol'
1.473337 Med      b'+1:postag:CD'
1.465167 O        b'symb'
1.452082 Supp     b'postag:NNP'
1.440404 Agit     b'-1:lemma:250'
1.440404 Agit     b'-1:word:250'
1.432836 Supp     b'+1:lemma:mm'
1.432836 Supp     b'+1:word:mM'
1.431900 Supp     b'-1:word:OmpR'
1.430655 Med      b'lemma:media'
1.430655 Med      b'word:media'
1.426094 Temp     b'-1:lemma:43'
1.426094 Temp     b'-1:word:43'
1.422591 Gtype    b'-1:lemma:nsrr'
1.422591 Gtype    b'+1:lemma:flagtag'
1.422591 Gtype    b'-1:word:NsrR'
1.422591 Gtype    b'+1:word:Flagtag'
1.412490 Substrain b'+1:lemma:phtpg'
1.412490 Substrain b'+1:word:PhtpG'
1.410049 Gtype    b'hUpper'
1.409170 Supp     b'lemma:Trp'
1.409170 Supp     b'word:Trp'
1.399407 O        b'lemma:ompr'
1.396482 OD       b'lemma:0.3'
1.396482 OD       b'word:0.3'
1.394675 Med      b'postag:NNP'
1.379031 O        b'lemma:for'
1.366116 O        b'lemma:argr'
1.366116 O        b'word:ArgR'
1.364573 O        b'lemma:chip'
1.364452 Gtype    b'+1:lemma:pq'
1.364452 Gtype    b'+1:word:PQ'
1.355058 Vess     b'+1:lemma:at'
1.355058 Vess     b'+1:word:at'
1.354287 Gtype    b'lemma:\xce\xb4fur'
1.354287 Gtype    b'word:\xce\x94fur'
1.351991 O        b'-1:word:ChIP-exo'
1.350834 O        b'-1:lemma:grow'
1.350584 OD       b'-1:lemma:~'
1.350584 OD       b'-1:word:~'
1.348987 Phase    b'-1:lemma:until'
1.348987 Phase    b'-1:word:until'
1.348651 Gversion b'lemma:000913'
1.348651 Gversion b'word:000913'
1.346233 O        b'-1:word:grown'
1.343282 O        b'lemma:2-3'
1.343282 O        b'word:2-3'
1.342599 Supp     b'+1:lemma:1'
1.342599 Supp     b'+1:word:1'
1.337962 O        b'lemma:purr'
1.337962 O        b'word:PurR'
1.335391 Gtype    b'lemma:crp'
1.335391 Gtype    b'word:crp'
1.334259 O        b'-1:lemma:ChIP-exo'
1.332936 Gtype    b'lemma:wild-type'
1.330878 Temp     b'lemma:37'
1.330878 Temp     b'word:37'
1.328818 O        b'+1:lemma:43'
1.328818 O        b'+1:word:43'
1.323775 O        b'lemma:a'
1.315700 Substrain b'-1:lemma:.'
1.315700 Substrain b'-1:postag:.'
1.315700 Substrain b'-1:word:.'
1.315474 Supp     b'word:NH4Cl'
1.313964 Technique b'hLower'
1.312418 Gversion b'-1:lemma:nc'
1.312418 Gversion b'+1:lemma:000913'
1.312418 Gversion b'-1:word:NC'
1.312418 Gversion b'+1:word:000913'
1.305599 Technique b'word:RNA-Seq'
1.303146 Med      b'lemma:glucose'
1.303146 Med      b'word:glucose'
1.299268 O        b'-1:word:fnr'
1.295356 Supp     b'-1:lemma:with'
1.295356 Supp     b'-1:word:with'
1.293239 O        b'+1:lemma:0.2'
1.293239 O        b'+1:word:0.2'
1.292737 Technique b'-1:lemma:_'
1.292737 Technique b'-1:word:_'
1.287258 Air      b'-1:postag:CD'
1.285096 Supp     b'+1:lemma:2'
1.285096 Supp     b'+1:word:2'
1.283134 O        b'postag:VBN'
1.281743 Supp     b'+1:word:was'
1.278978 O        b'lemma:soxr'
1.278978 O        b'word:SoxR'
1.278978 O        b'lemma:soxs'
1.278978 O        b'word:SoxS'
1.277413 Supp     b'word:Arginine'
1.275489 Technique b'-1:lemma:chip-exo'
1.274484 Med      b'-1:lemma:LB'
1.274278 Gversion b'lemma:u00096'
1.274278 Gversion b'+1:lemma:.2'
1.274278 Gversion b'word:U00096'
1.274278 Gversion b'+1:word:.2'
1.267624 Temp     b'-1:word:sample'
1.265402 Gversion b'lemma:_'
1.265402 Gversion b'word:_'
1.264473 Supp     b'+1:lemma:iptg'
1.264473 Supp     b'+1:word:IPTG'
1.264456 Gversion b'lemma:nc'
1.264456 Gversion b'word:NC'
1.263239 O        b'+1:lemma:coli'
1.263239 O        b'+1:word:coli'
1.261356 O        b'word:GadX'
1.259111 Gtype    b'+1:lemma:cra'
1.259111 Gtype    b'+1:word:cra'
1.254788 O        b'lemma:gadx'
1.252517 Air      b'lemma:Anaerobic'
1.250892 Supp     b'-1:lemma:ompr'
1.250236 Supp     b'lemma:leucine'
1.250236 Supp     b'word:leucine'
1.247695 pH       b'+1:lemma:5.5'
1.247695 pH       b'+1:word:5.5'
1.241305 O        b'word:for'
1.240618 O        b'+1:lemma:ph5'
1.240618 O        b'+1:word:pH5'
1.239209 Temp     b'-1:lemma:sample'
1.236391 Temp     b'lemma:\xc2\xb0c'
1.236391 Temp     b'word:\xc2\xb0C'
1.228827 O        b'-1:lemma:media'
1.228827 O        b'-1:word:media'
1.226279 O        b'+1:word:ChIP-Seq'
1.225198 Air      b'-1:postag:NN'
1.223342 O        b'-1:lemma:nh4cl'
1.221307 Gtype    b'lemma:\xce\xb4cra'
1.219081 O        b'-1:lemma:pq'
1.219081 O        b'-1:word:PQ'
1.218046 Anti     b'+1:lemma:antibody'
1.218046 Anti     b'+1:word:antibody'
1.214117 Supp     b'+1:lemma:deficient'
1.206944 O        b'lemma:affyexp'
1.206944 O        b'word:affyexp'
1.206867 Gversion b'postag:CD'
1.190746 Gtype    b'-1:lemma:_'
1.190746 Gtype    b'-1:word:_'
1.188084 Med      b'+1:lemma:-lrb-'
1.188084 Med      b'+1:word:-LRB-'
1.187645 Air      b'-1:lemma:co2'
1.187645 Air      b'-1:word:CO2'
1.187475 Technique b'+1:lemma:rna-seq'
1.187475 Technique b'+1:word:RNA-seq'
1.184233 Supp     b'word:NH4CL'
1.182279 Gversion b'lemma:.2'
1.182279 Gversion b'-1:lemma:u00096'
1.182279 Gversion b'word:.2'
1.182279 Gversion b'-1:word:U00096'
1.181439 O        b'-1:lemma:anaerobic'
1.180945 Temp     b'-1:lemma:\xcf\x8332'
1.180945 Temp     b'-1:word:\xcf\x8332'
1.179496 Med      b'+1:postag:-LRB-'
1.179255 Supp     b'+1:lemma:hour'
1.174377 OD       b'-1:lemma:at'
1.169640 Strain   b'-1:lemma:.'
1.169640 Strain   b'-1:postag:.'
1.169640 Strain   b'-1:word:.'
1.169310 Technique b'-1:lemma:input'
1.169310 Technique b'-1:word:Input'
1.167227 Supp     b'lemma:fructose'
1.167227 Supp     b'word:fructose'
1.164923 Gtype    b'lemma:delta-arca'
1.164923 Gtype    b'word:delta-arcA'
1.164802 Gtype    b'hLower'
1.161491 O        b'+1:postag:VBZ'
1.159802 O        b'-1:lemma:wt'
1.159179 Technique b'+1:postag:NN'
1.154564 O        b'lemma:harbor'
1.154564 O        b'word:harboring'
1.151869 Gtype    b'-1:lemma:from'
1.151869 Gtype    b'-1:word:from'
1.151741 Supp     b'-1:postag:IN'
1.148974 pH       b'-1:postag:NN'
1.147843 O        b'lemma:+'
1.147843 O        b'word:+'
1.145707 O        b'-1:lemma:type'
1.145707 O        b'-1:word:type'
1.143513 O        b'+1:lemma:fnr-8myc'
1.143513 O        b'+1:word:Fnr-8myc'
1.143268 Supp     b'-1:lemma:without'
1.143268 Supp     b'-1:word:without'
1.142171 Gtype    b'word:wt'
1.141979 O        b'+1:lemma:read'
1.135798 Gtype    b'-1:lemma:wild'
1.135798 Gtype    b'-1:word:wild'
1.135382 O        b'lemma:~'
1.135382 O        b'word:~'
1.134054 O        b'+1:word:reads'
1.107397 Agit     b'lemma:250'
1.107397 Agit     b'word:250'
1.104577 pH       b'-1:word:at'
1.099377 O        b'+1:postag:NNP'
1.099123 pH       b'-1:lemma:at'
1.096088 OD       b'-1:postag:IN'
1.093784 O        b'-1:lemma:-80'
1.093784 O        b'-1:word:-80'
1.089582 Gtype    b'postag:JJ'
1.085785 O        b'-1:lemma:\xc2\xb0c'
1.085785 O        b'-1:word:\xc2\xb0C'
1.084809 Technique b'+1:lemma:gadx'
1.083750 Technique b'+1:word:GadX'
1.083566 Gtype    b'-1:lemma:rpob'
1.083566 Gtype    b'-1:word:RpoB'
1.082716 O        b'-1:lemma:nacl'
1.082716 O        b'-1:word:NaCl'
1.080135 O        b'postag:CC'
1.078812 Gtype    b'+1:lemma:with'
1.078812 Gtype    b'+1:word:with'
1.077233 O        b'lemma:trpr'
1.077233 O        b'word:TrpR'
1.075596 O        b'lemma:s'
1.075596 O        b'word:S'
1.070921 Gtype    b'word:\xce\x94cra'
1.070860 Med      b'+1:lemma:+'
1.070860 Med      b'+1:word:+'
1.069995 O        b'-1:lemma:arginine'
1.069052 O        b'lemma:culture'
1.067441 O        b'-1:lemma:genotype/variation'
1.067441 O        b'-1:word:genotype/variation'
1.066779 O        b'lemma:Lrp'
1.063293 Gtype    b'-1:postag:VBP'
1.058016 O        b'-1:lemma:shake'
1.058016 O        b'-1:word:shaking'
1.054510 Anti     b'hGreek'
1.045274 Med      b'lemma:lb'
1.042561 Anti     b'-1:lemma:fnr'
1.040208 Supp     b'-1:postag:CD'
1.039911 O        b'-1:lemma:2-3'
1.039911 O        b'-1:word:2-3'
1.039335 O        b'lemma:oxyr'
1.039335 O        b'word:OxyR'
1.036069 O        b'word:tagged'
1.035250 O        b'-1:word:at'
1.033412 Gtype    b'+1:lemma:control'
1.033412 Gtype    b'+1:word:control'
1.029825 Gtype    b'lemma:wild'
1.029825 Gtype    b'word:wild'
1.027697 O        b'lemma:or'
1.027697 O        b'word:or'
1.026914 pH       b'lemma:5.5'
1.026914 pH       b'word:5.5'
1.024239 O        b'+1:lemma:wash'
1.024071 Anti     b'lemma:anti-rpob'
1.024071 Anti     b'word:anti-RpoB'
1.022105 O        b'+1:lemma:mid-log'
1.022105 O        b'+1:word:mid-log'
1.017020 O        b'-1:lemma:acetate'
1.017020 O        b'-1:word:acetate'
1.011507 Anti     b'-1:word:FNR'
1.008962 Air      b'-1:lemma:ryhb'
1.008962 Air      b'-1:word:ryhB'
1.008395 O        b'-1:lemma:no3'
1.008395 O        b'-1:word:NO3'
1.006249 Technique b'+1:word:ChIP-exo'
1.002886 O        b'-1:lemma:stpa'
1.002886 O        b'-1:word:stpA'
0.999773 Anti     b'lemma:anti-rpos'
0.999773 Anti     b'word:anti-RpoS'
0.999314 Gtype    b'lemma:ptac'
0.999314 Gtype    b'word:Ptac'
0.996840 O        b'lemma:Genome'
0.996840 O        b'word:Genome'
0.990942 OD       b'+1:lemma:of'
0.990942 OD       b'+1:word:of'
0.987588 OD       b'-1:lemma:od450'
0.987588 OD       b'-1:word:OD450'
0.985254 Technique b'-1:lemma:rna-seq'
0.985254 Technique b'-1:word:RNA-seq'
0.979474 Supp     b'+1:lemma:leucine'
0.979474 Supp     b'+1:word:leucine'
0.979235 O        b'+1:word:wash'
0.972589 Supp     b'-1:lemma:potassium'
0.972589 Supp     b'-1:word:potassium'


Top negative:
-0.064249 O        b'lemma:paraquat'
-0.064249 O        b'word:paraquat'
-0.064795 O        b'+1:lemma:95'
-0.064795 O        b'+1:word:95'
-0.065896 O        b'+1:lemma:25'
-0.065896 O        b'+1:word:25'
-0.066613 Supp     b'+1:postag:NNP'
-0.068540 Supp     b'postag:CC'
-0.069517 O        b'+1:lemma:mutant'
-0.069952 Gversion b'hGreek'
-0.070026 Supp     b'lemma:10'
-0.070026 Supp     b'word:10'
-0.070511 O        b'+1:lemma:-lcb-'
-0.070511 O        b'+1:word:-LCB-'
-0.072790 O        b'lemma:hour'
-0.074835 O        b'+1:lemma:rna'
-0.074835 O        b'+1:word:RNA'
-0.075574 O        b'lemma:phosphate'
-0.075574 O        b'word:phosphate'
-0.077239 Gtype    b'isGreek'
-0.078065 Air      b'-1:lemma::'
-0.078065 Air      b'-1:word::'
-0.078941 OD       b'+1:lemma:.'
-0.078941 OD       b'+1:postag:.'
-0.078941 OD       b'+1:word:.'
-0.080563 Supp     b'-1:lemma:.'
-0.080563 Supp     b'-1:postag:.'
-0.080563 Supp     b'-1:word:.'
-0.080781 O        b'word:fnr'
-0.084112 O        b'+1:postag:VBG'
-0.084396 Anti     b'-1:postag:CD'
-0.085238 O        b'+1:lemma:pk4854'
-0.085238 O        b'+1:word:PK4854'
-0.085579 Temp     b'-1:postag:IN'
-0.085770 Substrain b'isNumber'
-0.087884 Med      b'hLower'
-0.088642 O        b'-1:lemma:0.2'
-0.088642 O        b'-1:word:0.2'
-0.089495 O        b'+1:lemma:co2'
-0.089495 O        b'+1:word:CO2'
-0.090566 O        b'-1:lemma:um'
-0.090566 O        b'+1:lemma:paraquat'
-0.090566 O        b'-1:word:uM'
-0.090566 O        b'+1:word:paraquat'
-0.091307 O        b'-1:lemma:\xc3\x9f'
-0.091307 O        b'-1:word:\xc3\x9f'
-0.091988 Technique b'+1:postag:-RRB-'
-0.093129 Supp     b'lemma:,'
-0.093129 Supp     b'postag:,'
-0.093129 Supp     b'word:,'
-0.093497 Technique b'+1:lemma:-rrb-'
-0.093497 Technique b'+1:word:-RRB-'
-0.096193 O        b'-1:word:for'
-0.097248 Anti     b'isLower'
-0.098898 O        b'-1:lemma:~'
-0.098898 O        b'-1:word:~'
-0.099295 Med      b'+1:lemma:media'
-0.099295 Med      b'+1:word:media'
-0.099776 O        b'+1:lemma:until'
-0.099776 O        b'+1:word:until'
-0.101604 Vess     b'hLower'
-0.102227 O        b'word:Purified'
-0.102227 O        b'-1:word:Affinity'
-0.103610 O        b'-1:lemma:affinity'
-0.105338 O        b'lemma:deletion'
-0.105338 O        b'word:deletion'
-0.106637 Phase    b'-1:word:at'
-0.108083 O        b'-1:lemma:n2'
-0.108083 O        b'-1:word:N2'
-0.110546 Supp     b'-1:lemma:250'
-0.110546 Supp     b'-1:word:250'
-0.111889 O        b'-1:lemma:gade'
-0.112303 O        b'+1:postag:DT'
-0.112579 O        b'+1:lemma:delta'
-0.112579 O        b'+1:word:delta'
-0.112870 O        b'-1:lemma:gadx'
-0.113797 Air      b'+1:postag:NNS'
-0.115399 Gtype    b'-1:lemma:fur'
-0.115399 Gtype    b'-1:word:fur'
-0.116229 O        b'-1:lemma:gadw'
-0.118406 O        b'word:NH4Cl'
-0.118539 O        b'-1:word:Purified'
-0.118746 Phase    b'-1:lemma:at'
-0.118918 Gtype    b'-1:lemma:and'
-0.118918 Gtype    b'-1:word:and'
-0.119794 Gtype    b'+1:postag:NNS'
-0.121098 Strain   b'isLower'
-0.122591 Supp     b'postag:NNS'
-0.126093 O        b'+1:lemma:1/100'
-0.126093 O        b'+1:word:1/100'
-0.127119 O        b'lemma:mutant'
-0.130333 O        b'word:purified'
-0.130635 Vess     b'isNumber'
-0.133408 O        b'-1:lemma:mm'
-0.133408 O        b'-1:word:mM'
-0.135061 Supp     b'postag:IN'
-0.135283 O        b'+1:lemma:-lrb-'
-0.135283 O        b'+1:word:-LRB-'
-0.135994 O        b'+1:lemma:5'
-0.135994 O        b'+1:word:5'
-0.136447 O        b'lemma:n2'
-0.136447 O        b'word:N2'
-0.136503 O        b'lemma:1m'
-0.136503 O        b'word:1M'
-0.136714 O        b'lemma:min'
-0.136714 O        b'word:min'
-0.138370 O        b'lemma:\xce\xb4soxr'
-0.138370 O        b'word:\xce\x94soxR'
-0.138496 O        b'+1:lemma:pahse'
-0.138496 O        b'+1:word:pahse'
-0.140681 O        b'+1:word:mutant'
-0.142625 O        b'+1:postag:CD'
-0.144709 O        b'-1:lemma:deletion'
-0.144709 O        b'-1:word:deletion'
-0.145984 Phase    b'-1:postag:JJ'
-0.149372 O        b'+1:lemma:mg1655'
-0.149372 O        b'+1:word:MG1655'
-0.150176 O        b'-1:lemma:control'
-0.150176 O        b'-1:word:control'
-0.150336 Gtype    b'+1:lemma:,'
-0.150336 Gtype    b'+1:postag:,'
-0.150336 Gtype    b'+1:word:,'
-0.154116 O        b'lemma:o2'
-0.154116 O        b'word:O2'
-0.154481 O        b'-1:lemma:.'
-0.154481 O        b'-1:postag:.'
-0.154481 O        b'-1:word:.'
-0.155572 O        b'-1:lemma:sodium'
-0.155572 O        b'-1:word:Sodium'
-0.156639 O        b'lemma:pahse'
-0.156639 O        b'word:pahse'
-0.157136 O        b'+1:postag:VB'
-0.159296 O        b'lemma:rna'
-0.159296 O        b'word:RNA'
-0.161397 O        b'-1:lemma:final'
-0.161397 O        b'-1:word:final'
-0.169509 O        b'-1:postag:VBG'
-0.169640 Supp     b'lemma:and'
-0.169640 Supp     b'word:and'
-0.169811 O        b'lemma:\xce\xb4ompr'
-0.169811 O        b'word:\xce\x94ompR'
-0.171070 O        b'word:mutant'
-0.171433 Med      b'-1:lemma:MOPS'
-0.171433 Med      b'-1:word:MOPS'
-0.173516 Supp     b'-1:lemma:the'
-0.173927 Supp     b'-1:word:the'
-0.173952 Gtype    b'+1:lemma:2'
-0.173952 Gtype    b'+1:word:2'
-0.174653 O        b'+1:lemma:~'
-0.174653 O        b'+1:word:~'
-0.177161 Substrain b'hLower'
-0.179703 O        b'+1:lemma:gade'
-0.182621 Med      b'+1:lemma:.'
-0.182621 Med      b'+1:postag:.'
-0.182621 Med      b'+1:word:.'
-0.183411 O        b'lemma:dissolve'
-0.183411 O        b'word:dissolved'
-0.183595 O        b'lemma:phase'
-0.183595 O        b'word:phase'
-0.183718 O        b'+1:lemma:2.0'
-0.183718 O        b'+1:word:2.0'
-0.187171 O        b'-1:lemma:g/l'
-0.187171 O        b'-1:word:g/L'
-0.192068 Agit     b'hLower'
-0.193697 O        b'lemma:co2'
-0.193697 O        b'word:CO2'
-0.195313 Air      b'isLower'
-0.197580 O        b'lemma:\xce\xb4oxyr'
-0.197580 O        b'word:\xce\x94oxyR'
-0.199316 Supp     b'lemma:2'
-0.199316 Supp     b'word:2'
-0.200778 O        b'+1:postag:FW'
-0.201169 Agit     b'isUpper'
-0.201891 O        b'lemma:\xce\xb4soxs'
-0.201891 O        b'word:\xce\x94soxS'
-0.203225 O        b'+1:lemma:fecl2'
-0.203225 O        b'+1:word:FeCl2'
-0.205383 Air      b'postag:CD'
-0.209158 Med      b'+1:lemma:m9'
-0.209158 Med      b'+1:word:M9'
-0.210131 Phase    b'+1:postag:NN'
-0.213184 O        b'+1:lemma:gadw'
-0.213827 O        b'-1:lemma:mid-log'
-0.213827 O        b'-1:word:mid-log'
-0.217504 O        b'lemma:ph'
-0.217504 O        b'word:pH'
-0.219598 O        b'+1:lemma:b'
-0.219598 O        b'+1:word:B'
-0.219876 O        b'lemma:glucose'
-0.219876 O        b'word:glucose'
-0.221588 O        b'-1:lemma:ph'
-0.221588 O        b'-1:word:pH'
-0.222185 O        b'-1:lemma:dfnr'
-0.222185 O        b'-1:word:dFNR'
-0.225860 Supp     b'+1:lemma:-rrb-'
-0.225860 Supp     b'+1:word:-RRB-'
-0.225893 O        b'+1:lemma:min'
-0.225893 O        b'+1:word:min'
-0.230376 O        b'postag:NNP'
-0.231213 Supp     b'postag:CD'
-0.235379 O        b'-1:lemma:1m'
-0.235379 O        b'-1:word:1M'
-0.235742 O        b'-1:lemma:minimal'
-0.235742 O        b'-1:word:minimal'
-0.238452 Phase    b'isUpper'
-0.240457 Supp     b'-1:postag:VBN'
-0.242049 Supp     b'lemma:-lrb-'
-0.242049 Supp     b'word:-LRB-'
-0.245431 Supp     b'-1:lemma:in'
-0.245431 Supp     b'-1:word:in'
-0.246610 O        b'+1:lemma:from'
-0.246610 O        b'+1:word:from'
-0.246798 Gtype    b'-1:postag:CC'
-0.249112 O        b'lemma:150'
-0.249112 O        b'+1:lemma:mg/ml'
-0.249112 O        b'word:150'
-0.249112 O        b'+1:word:mg/mL'
-0.250988 O        b'+1:lemma:m'
-0.250988 O        b'+1:word:M'
-0.251320 O        b'lemma:methanol'
-0.251320 O        b'word:methanol'
-0.254077 Supp     b'-1:lemma:dpd'
-0.254077 Supp     b'-1:word:DPD'
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