Carlos-Francisco Méndez-Cruz / automatic-extraction-growth-conditions

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********** TRAINING AND TESTING REPORT **********
Training file: training-data-set-70-NER.txt

best params:{'c1': 0.0018289305439149793, 'c2': 0.04406859759586499}
best CV score:0.8117042290979286
model size: 0.14M

Flat F1: 0.8012547284983885
             precision    recall  f1-score   support

         OD      1.000     1.000     1.000        21
         pH      1.000     1.000     1.000        10
  Technique      1.000     1.000     1.000        33
        Med      1.000     0.804     0.891        56
       Temp      0.857     0.800     0.828        15
       Vess      0.000     0.000     0.000         0
       Agit      0.000     0.000     0.000         7
      Phase      1.000     0.762     0.865        21
        Air      0.895     0.386     0.540        88
       Anti      0.692     0.692     0.692        13
     Strain      0.000     0.000     0.000         0
      Gtype      0.925     0.795     0.855        78
  Substrain      0.000     0.000     0.000         0
       Supp      0.870     0.838     0.854       136
   Gversion      1.000     0.500     0.667         6

avg / total      0.905     0.742     0.801       484


Top likely transitions:
Med    -> Med     4.633837
Supp   -> Supp    4.545616
Anti   -> Anti    4.415924
O      -> O       4.388032
Air    -> Air     4.381634
Gtype  -> Gtype   4.342049
OD     -> OD      4.238889
Temp   -> Temp    4.137077
Gversion -> Gversion 3.904672
Phase  -> Phase   3.686078
pH     -> pH      2.723289
Technique -> Technique 2.399296
Agit   -> Agit    2.214439
Substrain -> Gtype   1.824109
Gtype  -> Supp    1.394770
O      -> Supp    1.336021
Air    -> O       1.335024
O      -> Gtype   1.144785
Technique -> Air     1.100353
O      -> Technique 0.950038
Gtype  -> pH      0.572752
O      -> Temp    0.331039
Supp   -> O       0.236008
Strain -> O       0.224194
O      -> pH      0.215160
Temp   -> O       0.198978
Gtype  -> Air     0.194403
O      -> Phase   0.157183
Med    -> O       0.125204
O      -> Strain  0.073837
Anti   -> O       0.068136
O      -> Agit    0.065138
O      -> Vess    0.021302
pH     -> O       0.005668
Strain -> Vess    -0.000355
Substrain -> Agit    -0.001160
O      -> Gversion -0.001760
Agit   -> Strain  -0.002813
Gversion -> Substrain -0.007936
Strain -> Strain  -0.008806
Vess   -> Phase   -0.009876
Gversion -> Vess    -0.009952
Strain -> Agit    -0.010684
Substrain -> Gversion -0.011795
Gversion -> Strain  -0.014516
Substrain -> Anti    -0.016109
Substrain -> Phase   -0.017418
Agit   -> Phase   -0.023706
Agit   -> Gversion -0.025490
Med    -> Substrain -0.028865
Agit   -> Anti    -0.028954
OD     -> Substrain -0.030785
Vess   -> O       -0.031210
Vess   -> Technique -0.040997
Strain -> Gversion -0.041594
Phase  -> Air     -0.043351
pH     -> Vess    -0.044033
pH     -> Substrain -0.049707
pH     -> Strain  -0.050159
Strain -> Anti    -0.050527
Gversion -> Phase   -0.053349
Temp   -> Strain  -0.053967
Temp   -> Substrain -0.056383
OD     -> Strain  -0.056958
OD     -> Vess    -0.057317
Temp   -> Vess    -0.059131
Med    -> Vess    -0.059304
Agit   -> O       -0.059385
Phase  -> Vess    -0.060779
Med    -> Strain  -0.061575
Vess   -> Med     -0.064980
Vess   -> Gtype   -0.066155
Phase  -> Agit    -0.068100
pH     -> Anti    -0.071230
OD     -> O       -0.071883
Strain -> Phase   -0.072357
OD     -> Anti    -0.073022
Anti   -> Agit    -0.075964
Air    -> Vess    -0.077522
pH     -> Phase   -0.078986
Phase  -> Strain  -0.081685
Temp   -> Agit    -0.081881
Anti   -> Strain  -0.083771
Phase  -> Substrain -0.087318
Anti   -> Vess    -0.089058
Vess   -> OD      -0.089615
Substrain -> Technique -0.093647
Air    -> Strain  -0.095276
Vess   -> Air     -0.096807
Vess   -> pH      -0.097062
Temp   -> Phase   -0.103575
Agit   -> Temp    -0.104161
Strain -> Med     -0.104597
Air    -> Substrain -0.105257
Temp   -> Gversion -0.106476
Med    -> Gversion -0.106524
Gversion -> Anti    -0.106638
Substrain -> Temp    -0.108164
Gversion -> Agit    -0.109581
Strain -> Technique -0.110485
Substrain -> Med     -0.113200
Med    -> Phase   -0.116231
Agit   -> pH      -0.116923
pH     -> Technique -0.116996
Agit   -> Vess    -0.118728
OD     -> Gversion -0.123580
Vess   -> Temp    -0.124565
Technique -> Vess    -0.126642
Anti   -> Substrain -0.130341
OD     -> Phase   -0.131042
Phase  -> Gversion -0.136834
Technique -> Strain  -0.137961
O      -> Anti    -0.138725
Strain -> OD      -0.139593
Agit   -> Med     -0.140120
Substrain -> Air     -0.142986
Strain -> Temp    -0.151405
Med    -> Anti    -0.151748
Substrain -> OD      -0.153697
Temp   -> Anti    -0.154205
Gtype  -> Vess    -0.161891
Vess   -> Supp    -0.165832
Med    -> Agit    -0.169910
Air    -> Anti    -0.174216
pH     -> Gversion -0.176431
OD     -> Agit    -0.178212
Air    -> Gversion -0.179921
Temp   -> pH      -0.180762
Agit   -> OD      -0.188155
Strain -> Air     -0.189012
Technique -> Substrain -0.189804
pH     -> Gtype   -0.191911
Agit   -> Gtype   -0.192533
Phase  -> O       -0.193231
Gtype  -> Strain  -0.193882
O      -> Substrain -0.195472
Gversion -> Med     -0.201073
pH     -> Med     -0.201443
Gversion -> OD      -0.201481
O      -> OD      -0.205475
Supp   -> Substrain -0.205611
Supp   -> Strain  -0.215354
Gtype  -> Agit    -0.228852
Gversion -> pH      -0.233480
Anti   -> Gversion -0.240484
Supp   -> Agit    -0.250645
Temp   -> Technique -0.255940
Technique -> Anti    -0.257511
Technique -> Phase   -0.258798
Anti   -> Phase   -0.258840
Substrain -> pH      -0.275429
pH     -> Agit    -0.280560
Supp   -> Vess    -0.283977
Med    -> OD      -0.290531
Air    -> pH      -0.299953
OD     -> Gtype   -0.300617
Strain -> pH      -0.304094
Gtype  -> O       -0.314315
Agit   -> Supp    -0.316927
Temp   -> OD      -0.322783
Gtype  -> Substrain -0.324644
Agit   -> Technique -0.324920
pH     -> OD      -0.329365
Strain -> Supp    -0.331250
pH     -> Air     -0.334270
Air    -> Gtype   -0.334601
Med    -> pH      -0.341838
OD     -> pH      -0.343474
Gversion -> Gtype   -0.358963
Anti   -> Air     -0.362707
Phase  -> pH      -0.371711
Strain -> Gtype   -0.372872
Substrain -> Supp    -0.379421
Technique -> O       -0.379601
Gversion -> Technique -0.382575
Anti   -> pH      -0.384874
Temp   -> Gtype   -0.400710
Phase  -> Temp    -0.403272
Phase  -> Anti    -0.407114
O      -> Med     -0.415942
Technique -> Agit    -0.418014
Temp   -> Supp    -0.419255
pH     -> Temp    -0.419838
Anti   -> Technique -0.429848
Phase  -> Gtype   -0.430546
Anti   -> OD      -0.433231
Technique -> Temp    -0.433639
Med    -> Technique -0.435856
Gversion -> Temp    -0.449076
Gversion -> Supp    -0.455755
Gversion -> Air     -0.463043
Med    -> Gtype   -0.487823
Gversion -> O       -0.501023
Supp   -> Phase   -0.505567
Supp   -> Anti    -0.514941
pH     -> Supp    -0.516331
Air    -> Med     -0.517534
Med    -> Temp    -0.522243
Air    -> OD      -0.527029
OD     -> Med     -0.527081
Gtype  -> Temp    -0.529717
Technique -> Gversion -0.531310
Gtype  -> Phase   -0.538633
Technique -> Med     -0.541646
Phase  -> Supp    -0.542854
Temp   -> Air     -0.548929
Air    -> Technique -0.559451
Agit   -> Air     -0.566496
Supp   -> Gversion -0.568605
OD     -> Technique -0.591242
Anti   -> Supp    -0.598597
OD     -> Temp    -0.599810
Anti   -> Gtype   -0.607429
Med    -> Air     -0.607939
Anti   -> Med     -0.619058
Air    -> Temp    -0.650159
Gtype  -> OD      -0.678202
Supp   -> pH      -0.683083
Supp   -> Gtype   -0.691368
Supp   -> Temp    -0.704583
Anti   -> Temp    -0.706194
Supp   -> OD      -0.714601
Gtype  -> Technique -0.733237
Air    -> Supp    -0.736925
Phase  -> Med     -0.745207
Supp   -> Technique -0.784780
OD     -> Supp    -0.812516
Supp   -> Air     -0.812831
Gtype  -> Gversion -0.837836
Technique -> Supp    -0.874024
Gtype  -> Anti    -0.920155
Air    -> Agit    -0.921546
Air    -> Phase   -0.949913
Phase  -> Technique -0.951179
O      -> Air     -0.973702
Gtype  -> Med     -0.983953
Technique -> OD      -1.000532
OD     -> Air     -1.086816
Temp   -> Med     -1.141552
Phase  -> OD      -1.300054
Substrain -> O       -1.405041
Technique -> Gtype   -1.557407
Supp   -> Med     -1.604074
Med    -> Supp    -1.964229
Technique -> pH      -2.106894


Top unlikely transitions:
Med    -> Med     4.633837
Supp   -> Supp    4.545616
Anti   -> Anti    4.415924
O      -> O       4.388032
Air    -> Air     4.381634
Gtype  -> Gtype   4.342049
OD     -> OD      4.238889
Temp   -> Temp    4.137077
Gversion -> Gversion 3.904672
Phase  -> Phase   3.686078
pH     -> pH      2.723289
Technique -> Technique 2.399296
Agit   -> Agit    2.214439
Substrain -> Gtype   1.824109
Gtype  -> Supp    1.394770
O      -> Supp    1.336021
Air    -> O       1.335024
O      -> Gtype   1.144785
Technique -> Air     1.100353
O      -> Technique 0.950038
Gtype  -> pH      0.572752
O      -> Temp    0.331039
Supp   -> O       0.236008
Strain -> O       0.224194
O      -> pH      0.215160
Temp   -> O       0.198978
Gtype  -> Air     0.194403
O      -> Phase   0.157183
Med    -> O       0.125204
O      -> Strain  0.073837
Anti   -> O       0.068136
O      -> Agit    0.065138
O      -> Vess    0.021302
pH     -> O       0.005668
Strain -> Vess    -0.000355
Substrain -> Agit    -0.001160
O      -> Gversion -0.001760
Agit   -> Strain  -0.002813
Gversion -> Substrain -0.007936
Strain -> Strain  -0.008806
Vess   -> Phase   -0.009876
Gversion -> Vess    -0.009952
Strain -> Agit    -0.010684
Substrain -> Gversion -0.011795
Gversion -> Strain  -0.014516
Substrain -> Anti    -0.016109
Substrain -> Phase   -0.017418
Agit   -> Phase   -0.023706
Agit   -> Gversion -0.025490
Med    -> Substrain -0.028865
Agit   -> Anti    -0.028954
OD     -> Substrain -0.030785
Vess   -> O       -0.031210
Vess   -> Technique -0.040997
Strain -> Gversion -0.041594
Phase  -> Air     -0.043351
pH     -> Vess    -0.044033
pH     -> Substrain -0.049707
pH     -> Strain  -0.050159
Strain -> Anti    -0.050527
Gversion -> Phase   -0.053349
Temp   -> Strain  -0.053967
Temp   -> Substrain -0.056383
OD     -> Strain  -0.056958
OD     -> Vess    -0.057317
Temp   -> Vess    -0.059131
Med    -> Vess    -0.059304
Agit   -> O       -0.059385
Phase  -> Vess    -0.060779
Med    -> Strain  -0.061575
Vess   -> Med     -0.064980
Vess   -> Gtype   -0.066155
Phase  -> Agit    -0.068100
pH     -> Anti    -0.071230
OD     -> O       -0.071883
Strain -> Phase   -0.072357
OD     -> Anti    -0.073022
Anti   -> Agit    -0.075964
Air    -> Vess    -0.077522
pH     -> Phase   -0.078986
Phase  -> Strain  -0.081685
Temp   -> Agit    -0.081881
Anti   -> Strain  -0.083771
Phase  -> Substrain -0.087318
Anti   -> Vess    -0.089058
Vess   -> OD      -0.089615
Substrain -> Technique -0.093647
Air    -> Strain  -0.095276
Vess   -> Air     -0.096807
Vess   -> pH      -0.097062
Temp   -> Phase   -0.103575
Agit   -> Temp    -0.104161
Strain -> Med     -0.104597
Air    -> Substrain -0.105257
Temp   -> Gversion -0.106476
Med    -> Gversion -0.106524
Gversion -> Anti    -0.106638
Substrain -> Temp    -0.108164
Gversion -> Agit    -0.109581
Strain -> Technique -0.110485
Substrain -> Med     -0.113200
Med    -> Phase   -0.116231
Agit   -> pH      -0.116923
pH     -> Technique -0.116996
Agit   -> Vess    -0.118728
OD     -> Gversion -0.123580
Vess   -> Temp    -0.124565
Technique -> Vess    -0.126642
Anti   -> Substrain -0.130341
OD     -> Phase   -0.131042
Phase  -> Gversion -0.136834
Technique -> Strain  -0.137961
O      -> Anti    -0.138725
Strain -> OD      -0.139593
Agit   -> Med     -0.140120
Substrain -> Air     -0.142986
Strain -> Temp    -0.151405
Med    -> Anti    -0.151748
Substrain -> OD      -0.153697
Temp   -> Anti    -0.154205
Gtype  -> Vess    -0.161891
Vess   -> Supp    -0.165832
Med    -> Agit    -0.169910
Air    -> Anti    -0.174216
pH     -> Gversion -0.176431
OD     -> Agit    -0.178212
Air    -> Gversion -0.179921
Temp   -> pH      -0.180762
Agit   -> OD      -0.188155
Strain -> Air     -0.189012
Technique -> Substrain -0.189804
pH     -> Gtype   -0.191911
Agit   -> Gtype   -0.192533
Phase  -> O       -0.193231
Gtype  -> Strain  -0.193882
O      -> Substrain -0.195472
Gversion -> Med     -0.201073
pH     -> Med     -0.201443
Gversion -> OD      -0.201481
O      -> OD      -0.205475
Supp   -> Substrain -0.205611
Supp   -> Strain  -0.215354
Gtype  -> Agit    -0.228852
Gversion -> pH      -0.233480
Anti   -> Gversion -0.240484
Supp   -> Agit    -0.250645
Temp   -> Technique -0.255940
Technique -> Anti    -0.257511
Technique -> Phase   -0.258798
Anti   -> Phase   -0.258840
Substrain -> pH      -0.275429
pH     -> Agit    -0.280560
Supp   -> Vess    -0.283977
Med    -> OD      -0.290531
Air    -> pH      -0.299953
OD     -> Gtype   -0.300617
Strain -> pH      -0.304094
Gtype  -> O       -0.314315
Agit   -> Supp    -0.316927
Temp   -> OD      -0.322783
Gtype  -> Substrain -0.324644
Agit   -> Technique -0.324920
pH     -> OD      -0.329365
Strain -> Supp    -0.331250
pH     -> Air     -0.334270
Air    -> Gtype   -0.334601
Med    -> pH      -0.341838
OD     -> pH      -0.343474
Gversion -> Gtype   -0.358963
Anti   -> Air     -0.362707
Phase  -> pH      -0.371711
Strain -> Gtype   -0.372872
Substrain -> Supp    -0.379421
Technique -> O       -0.379601
Gversion -> Technique -0.382575
Anti   -> pH      -0.384874
Temp   -> Gtype   -0.400710
Phase  -> Temp    -0.403272
Phase  -> Anti    -0.407114
O      -> Med     -0.415942
Technique -> Agit    -0.418014
Temp   -> Supp    -0.419255
pH     -> Temp    -0.419838
Anti   -> Technique -0.429848
Phase  -> Gtype   -0.430546
Anti   -> OD      -0.433231
Technique -> Temp    -0.433639
Med    -> Technique -0.435856
Gversion -> Temp    -0.449076
Gversion -> Supp    -0.455755
Gversion -> Air     -0.463043
Med    -> Gtype   -0.487823
Gversion -> O       -0.501023
Supp   -> Phase   -0.505567
Supp   -> Anti    -0.514941
pH     -> Supp    -0.516331
Air    -> Med     -0.517534
Med    -> Temp    -0.522243
Air    -> OD      -0.527029
OD     -> Med     -0.527081
Gtype  -> Temp    -0.529717
Technique -> Gversion -0.531310
Gtype  -> Phase   -0.538633
Technique -> Med     -0.541646
Phase  -> Supp    -0.542854
Temp   -> Air     -0.548929
Air    -> Technique -0.559451
Agit   -> Air     -0.566496
Supp   -> Gversion -0.568605
OD     -> Technique -0.591242
Anti   -> Supp    -0.598597
OD     -> Temp    -0.599810
Anti   -> Gtype   -0.607429
Med    -> Air     -0.607939
Anti   -> Med     -0.619058
Air    -> Temp    -0.650159
Gtype  -> OD      -0.678202
Supp   -> pH      -0.683083
Supp   -> Gtype   -0.691368
Supp   -> Temp    -0.704583
Anti   -> Temp    -0.706194
Supp   -> OD      -0.714601
Gtype  -> Technique -0.733237
Air    -> Supp    -0.736925
Phase  -> Med     -0.745207
Supp   -> Technique -0.784780
OD     -> Supp    -0.812516
Supp   -> Air     -0.812831
Gtype  -> Gversion -0.837836
Technique -> Supp    -0.874024
Gtype  -> Anti    -0.920155
Air    -> Agit    -0.921546
Air    -> Phase   -0.949913
Phase  -> Technique -0.951179
O      -> Air     -0.973702
Gtype  -> Med     -0.983953
Technique -> OD      -1.000532
OD     -> Air     -1.086816
Temp   -> Med     -1.141552
Phase  -> OD      -1.300054
Substrain -> O       -1.405041
Technique -> Gtype   -1.557407
Supp   -> Med     -1.604074
Med    -> Supp    -1.964229
Technique -> pH      -2.106894


Top positive:
7.194260 O        b'lemma:_'
5.404868 Supp     b'lemma:Iron'
5.314933 Air      b'lemma:anaerobic'
5.182464 Strain   b'lemma:k-12'
5.009325 O        b'lemma:1'
4.893104 Technique b'lemma:chipseq'
4.773881 Supp     b'lemma:pq'
4.718974 Phase    b'lemma:mid-log'
4.634871 Supp     b'lemma:glucose'
4.576040 Technique b'lemma:ChIP-exo'
4.506687 Phase    b'lemma:stationary'
4.506687 Phase    b'lemma:exponential'
4.491226 O        b'lemma:2'
4.477682 Gtype    b'lemma:wt'
4.398558 O        b'lemma:Cra'
4.218871 Supp     b'+1:lemma:\xc2\xb5m'
4.116789 Air      b'-1:lemma:ChIP-Seq'
4.036589 Gtype    b'lemma:\xce\xb4cra'
4.015347 O        b'lemma:rep2'
4.015347 O        b'lemma:rep1'
3.997210 O        b'lemma:3'
3.904222 Gtype    b'lemma:\xce\xb4fur'
3.897531 Supp     b'lemma:2h'
3.897531 Supp     b'-1:lemma:additional'
3.863739 O        b'lemma:b'
3.850067 Gversion b'lemma:asm584v2'
3.830297 Air      b'lemma:aerobically'
3.752666 Gtype    b'lemma:arca8myc'
3.752077 Supp     b'lemma:nh4cl'
3.732798 O        b'-1:lemma:tag'
3.727913 Gtype    b'-1:lemma:\xe2\x88\x86'
3.653562 Supp     b'lemma:acetate'
3.623231 Supp     b'lemma:no3'
3.589438 Med      b'lemma:LB'
3.558578 O        b'postag:IN'
3.530522 O        b'lemma:rpob'
3.500186 O        b'lemma:-'
3.482632 Substrain b'lemma:mg1655'
3.464014 O        b'lemma:CEL'
3.443958 Temp     b'lemma:\xc2\xb0c'
3.420572 Med      b'lemma:MOPS'
3.418200 Technique b'lemma:rna-seq'
3.389490 Gtype    b'lemma:delta-fnr'
3.354120 O        b'+1:lemma:pq'
3.344598 O        b'postag:VBG'
3.336973 Supp     b'lemma:dpd'
3.311415 O        b'postag::'
3.229945 Supp     b'-1:lemma:Cra'
3.202133 Gtype    b'lemma:\xe2\x88\x86'
3.175536 O        b'-1:lemma:0.3'
3.145769 Technique b'lemma:chip-seq'
3.108486 Supp     b'lemma:rifampicin'
3.097087 Air      b'lemma:aerobic'
3.091758 O        b'lemma:\xcf\x8332'
3.064263 O        b'-1:lemma:glucose'
3.037009 Anti     b'lemma:none'
3.028511 Gtype    b'lemma:delta-arca'
3.022664 Gtype    b'lemma:fnr8myc'
3.012556 O        b'lemma:affyexp'
3.011254 Temp     b'+1:lemma:\xc2\xb0c'
3.008567 Gtype    b'lemma:type'
2.994125 Air      b'lemma:anaeroibc'
2.993727 Med      b'+1:lemma:0.4'
2.992587 Med      b'-1:lemma:ml'
2.969844 O        b'lemma:.'
2.969844 O        b'postag:.'
2.963657 Anti     b'lemma:\xcf\x8332'
2.949765 Technique b'lemma:rnaseq'
2.940966 Gtype    b'+1:lemma:type'
2.927427 Anti     b'lemma:seqa'
2.916425 Strain   b'+1:lemma:substr'
2.913940 Supp     b'+1:lemma:Deficient'
2.875961 Air      b'-1:lemma:-'
2.862542 Vess     b'lemma:flask'
2.862542 Vess     b'-1:lemma:warm'
2.848524 Temp     b'-1:lemma:37'
2.842503 Air      b'postag:RB'
2.836648 Supp     b'lemma:arginine'
2.775901 Med      b'lemma:lb'
2.758783 Technique b'lemma:chip-exo'
2.745732 O        b'lemma:a'
2.743498 Supp     b'lemma:nacl'
2.728242 Supp     b'lemma:Adenine'
2.723604 Gtype    b'lemma:WT'
2.716341 Supp     b'+1:lemma:1'
2.698954 O        b'-1:lemma:lb'
2.684062 O        b'+1:lemma:wt'
2.674812 O        b'postag:VBN'
2.660388 Supp     b'lemma:Leu'
2.650795 Supp     b'lemma:iptg'
2.625378 pH       b'lemma:ph5'
2.625378 pH       b'+1:lemma:.5'
2.622198 Gversion b'lemma:chip-seq'
2.619488 O        b'lemma:argr'
2.616579 Supp     b'+1:lemma:mm'
2.611003 Gtype    b'+1:lemma:pq'
2.595783 Technique b'lemma:ChIP-Seq'
2.569170 O        b'lemma:with'
2.560629 Gtype    b'lemma:dfnr'
2.556248 O        b'lemma:chip-arca'
2.546180 Med      b'-1:lemma:in'
2.530935 Supp     b'lemma:Fe'
2.501399 O        b'+1:lemma:k-12'
2.500573 O        b'+1:lemma:43'
2.495927 Gversion b'lemma:u00096'
2.495927 Gversion b'+1:lemma:.2'
2.491320 Air      b'lemma:Anaerobic'
2.479825 Phase    b'-1:lemma:mid-log'
2.470674 Gtype    b'-1:lemma:nsrr'
2.470674 Gtype    b'+1:lemma:flagtag'
2.463403 Gtype    b'lemma:deltaseqa'
2.463403 Gtype    b'-1:lemma:old'
2.462843 Substrain b'+1:lemma:phtpg'
2.457826 O        b'lemma:gadx'
2.454172 Gtype    b'+1:lemma:with'
2.445955 O        b'lemma:ompr'
2.439242 Supp     b'-1:lemma:with'
2.438587 O        b'+1:postag:RB'
2.437594 O        b'lemma:purr'
2.436086 Supp     b'-1:lemma:+'
2.432849 Gversion b'lemma:nc'
2.414661 Gtype    b'lemma:\xce\xb4ompr'
2.408751 Supp     b'+1:lemma:deficient'
2.400179 Gversion b'lemma:.2'
2.400179 Gversion b'-1:lemma:u00096'
2.391421 O        b'lemma:chip'
2.386406 Med      b'+1:lemma:2.0'
2.382102 Gtype    b'lemma:\xce\xb4oxyr'
2.374286 Gtype    b'+1:lemma:ph5'
2.359253 Gtype    b'lemma:pk4854'
2.349920 Phase    b'lemma:phase'
2.338446 Agit     b'+1:lemma:rpm'
2.337063 Supp     b'+1:lemma:2'
2.318255 O        b'+1:lemma:od600'
2.312715 Temp     b'lemma:43'
2.310690 Supp     b'-1:lemma:vol'
2.300912 Gtype    b'-1:lemma:ptac'
2.297656 Agit     b'lemma:rpm'
2.296445 Vess     b'-1:postag:VBN'
2.285845 O        b'lemma:at'
2.261402 Med      b'postag:NNP'
2.254225 Supp     b'+1:lemma:_'
2.227806 Gtype    b'lemma:ptac'
2.226506 OD       b'lemma:od450'
2.224052 pH       b'+1:postag:CD'
2.214460 Technique b'-1:lemma:IP'
2.208531 Gtype    b'lemma:wild-type'
2.200419 O        b'-1:lemma:type'
2.195198 O        b'lemma:soxr'
2.195198 O        b'lemma:soxs'
2.188517 O        b'-1:lemma:ChIP-exo'
2.178149 Supp     b'+1:lemma:iptg'
2.176261 Substrain b'lemma:mg1655star'
2.172059 Technique b'-1:lemma:input'
2.169890 O        b'lemma:genotype/variation'
2.167132 O        b'lemma:s'
2.156482 Agit     b'-1:lemma:250'
2.155561 Agit     b'lemma:250'
2.139166 Technique b'+1:lemma:gadx'
2.135001 Med      b'lemma:media'
2.129627 Gtype    b'+1:lemma:_'
2.126618 Supp     b'lemma:fructose'
2.091665 Gtype    b'-1:lemma:rpob'
2.083225 Air      b'-1:lemma:co2'
2.076389 OD       b'-1:lemma:od450'
2.075760 O        b'-1:postag:NNS'
2.075678 O        b'-1:lemma:stpa'
2.072624 Supp     b'+1:lemma:hour'
2.071551 O        b'-1:lemma:.5'
2.067590 O        b'+1:lemma:coli'
2.058895 O        b'lemma:trpr'
2.056374 O        b'-1:lemma:pq'
2.053000 O        b'+1:lemma:\xe2\x88\x86'
2.051525 O        b'-1:lemma:anaerobic'
2.049184 Gtype    b'-1:lemma:_'
2.044090 O        b'lemma:Lrp'
2.040744 Technique b'+1:lemma:chip-exo'
2.026652 Temp     b'lemma:37'
2.022779 O        b'-1:lemma:nh4cl'
2.014508 Gversion b'lemma:000913'
2.012924 Med      b'lemma:m63'
2.000652 OD       b'-1:lemma:~'
1.994850 Temp     b'-1:lemma:43'
1.985925 O        b'+1:lemma:ph5'
1.965437 Gtype    b'lemma:crp'
1.965175 O        b'+1:lemma:250'
1.941758 Supp     b'-1:lemma:ompr'
1.940350 O        b'postag:DT'
1.938800 O        b'lemma:A'
1.934996 Phase    b'-1:lemma:until'
1.934316 Med      b'-1:lemma:fresh'
1.928748 Air      b'-1:postag::'
1.923471 O        b'-1:lemma:Anaerobic'
1.920469 Gtype    b'lemma:wildtype'
1.918554 Supp     b'lemma:leucine'
1.913677 O        b'-1:lemma:no3'
1.911001 Technique b'postag:NNP'
1.909288 O        b'lemma:for'
1.907431 O        b'-1:lemma:phase'
1.907190 Gtype    b'lemma:\xce\xb4soxr'
1.906833 O        b'lemma:chip-fnr'
1.905903 Supp     b'-1:lemma:potassium'
1.902346 O        b'lemma:input'
1.902346 O        b'+1:lemma:chip-seq'
1.902273 Substrain b'-1:lemma:.'
1.902273 Substrain b'-1:postag:.'
1.901949 Supp     b'-1:lemma:without'
1.897427 O        b'postag:NNS'
1.897426 Temp     b'-1:lemma:sample'
1.887093 pH       b'lemma:5.5'
1.881044 OD       b'lemma:0.3'
1.874330 Technique b'-1:lemma:_'
1.874286 Anti     b'+1:lemma:antibody'
1.873764 Supp     b'-1:lemma:sodium'
1.871417 Gversion b'-1:lemma:nc'
1.871417 Gversion b'+1:lemma:000913'
1.859901 O        b'lemma:Fur'
1.856464 OD       b'+1:lemma:of'
1.856306 O        b'-1:lemma:\xc2\xb0c'
1.848906 Gtype    b'-1:lemma:phtpg'
1.847282 O        b'lemma:or'
1.843521 OD       b'-1:lemma:at'
1.842209 Air      b'-1:lemma:_'
1.841448 Gtype    b'lemma:\xce\xb4soxs'
1.840873 O        b'-1:lemma:Aerobic'
1.837843 Vess     b'+1:lemma:at'
1.834370 Gtype    b'+1:postag::'
1.833701 Med      b'lemma:medium'
1.820297 Technique b'-1:lemma:chip-exo'
1.819835 Gtype    b'+1:lemma:cra'
1.819640 O        b'lemma:Genome'
1.807951 Med      b'lemma:glucose'
1.804106 O        b'+1:lemma:30'
1.803995 Technique b'+1:lemma:rna-seq'
1.803534 O        b'lemma:delta'
1.799980 pH       b'-1:lemma:ph'
1.791391 Gtype    b'lemma:phtpg'
1.784986 O        b'postag:CC'
1.776301 O        b'-1:lemma:wt'
1.769075 Anti     b'-1:lemma::'
1.757120 pH       b'lemma:.5'
1.757120 pH       b'-1:lemma:ph5'
1.756856 Technique b'-1:lemma:rna-seq'
1.754908 Gversion b'+1:lemma:genome'
1.745237 O        b'lemma:cra'
1.743172 O        b'-1:lemma:into'
1.741117 Gtype    b'-1:lemma:wild'
1.739193 O        b'-1:lemma:nacl'
1.738025 O        b'lemma:harbor'
1.738012 Air      b'-1:lemma:ryhb'
1.735122 Med      b'+1:lemma:+'
1.734312 O        b'postag:SYM'
1.731999 O        b'+1:lemma:sparging'
1.725131 O        b'lemma:c'
1.722956 Supp     b'lemma:Trp'
1.722373 O        b'lemma:oxyr'
1.721398 O        b'-1:lemma:acetate'
1.715813 Med      b'+1:postag:CD'
1.714804 O        b'-1:lemma:min'
1.714769 Supp     b'-1:lemma:final'
1.707488 Air      b'postag:JJ'
1.702218 Air      b'lemma:Aerobic'
1.702109 pH       b'+1:lemma:5.5'
1.699378 O        b'lemma:growth'
1.694067 Temp     b'-1:lemma:\xcf\x8332'
1.691915 O        b'lemma:C'
1.691130 Med      b'postag:NNS'
1.689834 Supp     b'lemma:of'
1.687916 Anti     b'-1:lemma:fnr'
1.685520 OD       b'-1:postag:IN'
1.678788 O        b'lemma:culture'
1.678102 pH       b'lemma:ph'
1.662131 O        b'+1:lemma:fnr-8myc'
1.656422 Supp     b'-1:lemma:\xce\xb4cra'
1.656409 O        b'lemma:genotype'
1.645267 Gversion b'lemma:_'
1.643802 Gtype    b'lemma:wild'
1.642055 O        b'lemma:ml'
1.629453 Med      b'lemma:minimal'
1.625855 Gversion b'postag:CD'
1.619600 Gtype    b'-1:lemma:factor'
1.605291 Gtype    b'lemma:flagtag'
1.604424 O        b'-1:lemma:l1'
1.603839 O        b'-1:lemma:arginine'
1.601946 OD       b'lemma:of'
1.599307 Gtype    b'-1:lemma:from'
1.599235 Technique b'-1:lemma:1'
1.585127 Supp     b'lemma:sodium'
1.584259 Gtype    b'lemma:delta-soxr'
1.584259 Gtype    b'lemma:delta-gadx'
1.584259 Gtype    b'lemma:delta-gadw'
1.584259 Gtype    b'lemma:delta-oxyr'
1.584259 Gtype    b'lemma:delta-gade'
1.584259 Gtype    b'lemma:delta-soxs'
1.579912 Gtype    b'lemma:gade-8myc'
1.579912 Gtype    b'lemma:\xce\xb4seqa'
1.579856 Gtype    b'lemma:\xce\xb4arca'
1.578401 O        b'lemma:lrp'
1.575259 Gtype    b'+1:lemma:control'
1.573488 O        b'lemma:Nac'
1.573136 O        b'lemma:pt7'
1.572917 O        b'lemma:ntrc'
1.572917 O        b'lemma:csir'
1.571370 Supp     b'-1:lemma:contain'
1.567529 O        b'-1:lemma:grow'
1.566897 Supp     b'lemma:tryptophan'
1.566897 Supp     b'-1:lemma:mg/l'
1.562778 O        b'-1:lemma:genotype/variation'
1.539680 Gtype    b'-1:lemma::'
1.534395 Gtype    b'lemma:ompr-8myc'
1.531171 Supp     b'lemma:glutamine'
1.531171 Supp     b'-1:lemma:2g/l'
1.530664 Med      b'+1:postag:-LRB-'
1.524539 O        b'+1:lemma:mid-log'
1.515381 Med      b'+1:lemma:-lrb-'
1.511370 O        b'-1:lemma:shake'
1.499546 O        b'-1:lemma:media'
1.499254 Gtype    b'-1:postag:VBP'
1.498565 O        b'+1:lemma:acetate'
1.495824 pH       b'-1:lemma:at'
1.495356 Anti     b'-1:lemma:myc'
1.492764 Strain   b'-1:lemma:.'
1.492764 Strain   b'-1:postag:.'
1.490511 Gtype    b'lemma:nsrr'
1.488148 O        b'+1:lemma:wash'
1.484836 OD       b'postag:CD'
1.481097 Supp     b'-1:lemma:mm'
1.478815 O        b'lemma:antibody'
1.478706 O        b'-1:lemma:one'
1.477792 Anti     b'lemma:anti-rpob'
1.476375 O        b'lemma:one'
1.472112 Anti     b'lemma:anti-myc'
1.469222 O        b'-1:lemma:fructose'
1.458540 Gtype    b'lemma:purr-8myc'
1.458004 OD       b'+1:postag:IN'
1.452418 Supp     b'-1:lemma:respiration'
1.452418 Supp     b'+1:lemma:mmol'
1.442857 Supp     b'lemma:final'
1.436930 Air      b'-1:postag:NN'
1.429984 Gtype    b'lemma:fnr-8myc'
1.429943 Technique b'lemma:-rrb-'
1.421420 Supp     b'+1:lemma:phosphate'
1.419713 Anti     b'lemma:anti-rpos'
1.414698 Supp     b'lemma:30'
1.414459 Gtype    b'-1:postag:VBG'
1.412629 O        b'+1:lemma:20'
1.401976 Supp     b'-1:lemma:30'
1.398894 Anti     b'-1:postag::'
1.396245 Technique b'+1:lemma:Anaerobic'
1.390273 Med      b'-1:lemma:minimal'
1.389540 pH       b'-1:postag:NN'
1.385067 O        b'+1:lemma:0.2'
1.384674 Supp     b'-1:postag:IN'
1.374225 Gtype    b'lemma:\xce\xb4gade'
1.373528 Gtype    b'lemma:\xce\xb4gadw'
1.373528 Gtype    b'lemma:\xce\xb4gadx'
1.373164 O        b'lemma::'
1.367661 O        b'+1:lemma:um'
1.366836 Med      b'-1:postag:JJ'
1.360411 Gtype    b'lemma:lrp-8myc'
1.359661 Gtype    b'lemma:fur-8myc'
1.359661 Gtype    b'lemma:cra-8myc-tagged'
1.358089 O        b'lemma:agitation'
1.353951 O        b'+1:postag:NNP'
1.341810 Air      b'-1:lemma:cm20'
1.337544 Supp     b'+1:lemma:leucine'
1.337308 O        b'-1:lemma:aerobic'
1.335481 Gtype    b'-1:lemma:Wild'
1.331688 Med      b'-1:lemma:LB'
1.323538 Gtype    b'+1:lemma:fructose'
1.323069 O        b'-1:lemma:-80'
1.322682 Supp     b'-1:lemma:2'
1.320646 Supp     b'+1:lemma:min'
1.320629 Technique b'+1:postag:NN'
1.320420 Technique b'lemma:-lrb-'
1.319784 O        b'lemma:contain'
1.318593 O        b'+1:postag::'
1.318049 O        b'+1:lemma::'
1.317688 O        b'lemma:2-3'
1.315626 O        b'+1:postag:VBZ'
1.311417 Air      b'+1:lemma:%'
1.306647 Technique b'postag:-LRB-'
1.305404 Supp     b'+1:lemma:1m'
1.305350 O        b'lemma:-lrb-'
1.298363 Gtype    b'lemma:oxyr-8myc'
1.298363 Gtype    b'lemma:soxr-8myc'
1.298363 Gtype    b'lemma:soxs-8myc'
1.291259 O        b'-1:lemma:dpd'
1.289530 Anti     b'+1:lemma:-lrb-'
1.286546 Supp     b'-1:postag:CC'
1.282890 Supp     b'lemma:1m'
1.274993 Supp     b'-1:lemma:1m'
1.274400 Anti     b'+1:postag:-LRB-'
1.272488 OD       b'lemma:od600'
1.270633 O        b'+1:postag:VBN'
1.270007 O        b'+1:lemma:dpd'
1.269642 Gtype    b'-1:lemma:harbor'
1.268515 Supp     b'-1:lemma:soxr'
1.268515 Supp     b'-1:lemma:soxs'
1.267585 O        b'lemma:to'
1.267585 O        b'postag:TO'
1.262267 Supp     b'lemma:nitrate'
1.261380 O        b'+1:lemma:nacl'
1.260757 O        b'-1:lemma:induce'
1.259914 Supp     b'+1:lemma:%'
1.258973 O        b'lemma:additional'
1.258973 O        b'+1:lemma:2h'
1.256052 O        b'lemma:IP'
1.255072 Technique b'postag:-RRB-'
1.254476 Air      b'+1:lemma:at'
1.253609 Supp     b'-1:lemma:\xc2\xb5m'
1.252976 Supp     b'lemma:cm20'
1.252976 Supp     b'-1:lemma:\xc2\xb5l'
1.252337 Anti     b'-1:lemma:monoclonal'
1.250832 O        b'-1:lemma:after'
1.249407 Gtype    b'-1:lemma:knock-out'
1.249265 Air      b'+1:lemma:b'
1.247959 Supp     b'lemma:phosphate'
1.247854 Gtype    b'lemma:ryhb'
1.246243 Supp     b'+1:lemma:anaerobically'
1.243654 Med      b'-1:lemma:glucose'
1.240805 Supp     b'-1:postag:CD'
1.240105 Supp     b'postag:NNP'
1.237617 O        b'lemma:fresh'
1.235545 Anti     b'lemma:tag'
1.234181 Supp     b'-1:postag:JJ'
1.231236 Anti     b'+1:lemma:from'
1.229247 O        b'-1:postag:NN'
1.226685 O        b'lemma:induction'
1.222251 Technique b'lemma:ChIPSeq'
1.218782 Gtype    b'+1:lemma::'
1.218568 Air      b'lemma:%'
1.218487 O        b'lemma:600'
1.212227 O        b'+1:lemma:m9'
1.209614 Med      b'+1:lemma:g/l'
1.202507 Supp     b'+1:lemma:be'
1.195080 Phase    b'-1:lemma::'
1.193940 Supp     b'lemma:2g/l'
1.193940 Supp     b'+1:lemma:glutamine'
1.192115 O        b'+1:lemma:fructose'
1.191902 O        b'+1:lemma:minute'
1.190640 Gtype    b'+1:lemma:knock-out'
1.187185 Supp     b'+1:lemma:and'
1.186027 Air      b'+1:lemma:95'
1.185395 O        b'-1:lemma:0.3-0.35'
1.180219 O        b'+1:lemma:read'
1.179687 Supp     b'lemma:20'
1.177114 Med      b'+1:lemma:minimal'
1.176954 Temp     b'+1:lemma:and'
1.175988 O        b'lemma:+'
1.173766 Vess     b'+1:postag:IN'
1.173676 Supp     b'-1:lemma:m'
1.167353 Gtype    b'+1:lemma:small'
1.166228 O        b'-1:lemma:mg1655'
1.165872 Gtype    b'lemma::'
1.165343 O        b'+1:lemma:od450'
1.163127 Gtype    b'lemma:Wild'
1.160650 Supp     b'+1:lemma:1/100'
1.154148 O        b'postag:CD'
1.146905 O        b'lemma:respiration'
1.146714 Supp     b'-1:lemma:cra'
1.146290 Technique b'-1:lemma:2'
1.146142 OD       b'+1:postag:JJ'
1.139625 O        b'-1:lemma:genotype'
1.138642 Med      b'+1:lemma:with'
1.133538 OD       b'+1:lemma:0.3-0.35'
1.133132 O        b'+1:lemma:ChIP-Seq'
1.129582 Supp     b'lemma:in'
1.126598 Gtype    b'postag:-RRB-'
1.122605 O        b'-1:lemma:or'
1.121416 O        b'-1:lemma:nitrate'
1.120849 OD       b'+1:lemma:,'
1.120849 OD       b'+1:postag:,'
1.120445 O        b'postag:-RRB-'
1.117897 Phase    b'+1:lemma:culture'
1.115652 Gtype    b'-1:lemma:delta'
1.115410 Gtype    b'-1:lemma:vector'
1.114478 Med      b'+1:lemma:medium'
1.110703 Supp     b'-1:lemma:\xce\xb4ompr'
1.110368 Gtype    b'+1:lemma:the'
1.103496 Anti     b'+1:postag:NN'
1.103371 Temp     b'+1:lemma:short'
1.102415 Supp     b'-1:lemma:0.3'
1.101763 OD       b'lemma:o.d.'
1.101763 OD       b'+1:lemma:600nm'
1.097565 O        b'-1:lemma:4'
1.095460 O        b'lemma:genome'
1.094538 Gversion b'+1:postag:CD'
1.093626 Air      b'+1:lemma:C'
1.092071 O        b'lemma:escherichia'
1.089748 Temp     b'+1:postag:CC'
1.086497 O        b'lemma:treatment'
1.083822 O        b'-1:lemma:medium'
1.078511 Supp     b'-1:lemma:_'
1.075608 Gversion b'-1:postag:DT'
1.075504 Agit     b'+1:postag:-RRB-'
1.071966 O        b'lemma:-80'
1.066508 Supp     b'+1:lemma:mg/l'
1.065103 Phase    b'lemma:pahse'
1.064705 O        b'-1:lemma:.2'


Top negative:
0.017402 O        b'-1:lemma:repeated'
0.017366 Supp     b'lemma:mm'
0.017041 O        b'lemma:its'
0.017041 O        b'postag:PRP$'
0.017041 O        b'+1:lemma:derivative'
0.017039 O        b'lemma:sequence'
0.017001 O        b'+1:lemma:remainder'
0.016848 O        b'-1:lemma:period'
0.016848 O        b'+1:lemma:cool'
0.016698 O        b'-1:lemma:then'
0.016357 O        b'lemma:sequencing'
0.016300 O        b'-1:lemma:nuclease'
0.016157 O        b'-1:lemma:EcoCyc'
0.016157 O        b'+1:lemma:Keseler'
0.016065 O        b'+1:lemma:analysis'
0.015937 O        b'-1:lemma:lrp'
0.015632 O        b'-1:lemma:Neoclone'
0.015632 O        b'+1:lemma:wp002'
0.015330 O        b'lemma:further'
0.015027 O        b'-1:lemma:g'
0.014678 O        b'lemma:significant'
0.014678 O        b'-1:lemma:statistically'
0.014678 O        b'+1:lemma:differential'
0.014625 O        b'+1:lemma:none'
0.014613 O        b'+1:lemma:seqa'
0.014229 O        b'-1:lemma:EB'
0.013978 O        b'-1:lemma:remove'
0.013658 O        b'lemma:spin'
0.013379 O        b'lemma:3-30'
0.013326 O        b'lemma:iron'
0.013245 O        b'-1:lemma:trpr'
0.013146 O        b'+1:lemma:\xce\xb4soxr'
0.012968 O        b'-1:lemma:antibody-protein-dna'
0.012828 O        b'lemma:1:100'
0.012804 O        b'lemma:2010'
0.012734 O        b'+1:lemma:\xcf\x8332'
0.012535 O        b'lemma:recombination'
0.012535 O        b'-1:lemma:site-specific'
0.012535 O        b'+1:lemma:method'
0.012142 O        b'lemma:reverse'
0.012084 O        b'+1:lemma:Adenine'
0.011718 O        b'+1:lemma:dtt'
0.011576 O        b'+1:lemma:no'
0.011415 O        b'lemma:derivative'
0.011415 O        b'-1:lemma:its'
0.011415 O        b'-1:postag:PRP$'
0.011319 O        b'lemma:purification'
0.011319 O        b'-1:lemma:pcr'
0.011319 O        b'+1:lemma:kit'
0.011265 O        b'lemma:into'
0.010761 O        b'-1:lemma:5000'
0.010754 O        b'-1:lemma:crosslink'
0.010607 O        b'-1:lemma:unique'
0.010490 O        b'-1:lemma:than'
0.010490 O        b'+1:lemma:mismatch'
0.010351 O        b'lemma:match'
0.010351 O        b'-1:lemma:not'
0.010351 O        b'+1:lemma:annotated'
0.010189 O        b'lemma:crosslink'
0.010176 O        b'lemma:%'
0.010149 O        b'lemma:stir'
0.010009 O        b'+1:lemma:saline'
0.009999 O        b'lemma:Cruz'
0.009999 O        b'-1:lemma:Santa'
0.009999 O        b'+1:lemma:Biotech'
0.009859 O        b'lemma:annotated'
0.009859 O        b'-1:lemma:match'
0.009651 O        b'-1:lemma:annotated'
0.009579 O        b'lemma:g'
0.009579 O        b'-1:lemma:x'
0.009370 O        b'-1:lemma:100ml'
0.009328 O        b'-1:lemma:al'
0.009219 O        b'+1:lemma:overnight'
0.008937 O        b'lemma:2009'
0.008709 O        b'-1:lemma:bp'
0.008466 O        b'+1:lemma:allow'
0.008333 O        b'+1:lemma:e.g.'
0.007967 Air      b'-1:postag:-LRB-'
0.007724 O        b'-1:lemma:voluman'
0.007693 O        b'lemma:antibody-protein-dna'
0.007693 O        b'-1:lemma:capture'
0.007604 O        b'-1:lemma:BaySeq'
0.007604 O        b'+1:lemma:Hardcastle'
0.007081 O        b"lemma:'s"
0.007081 O        b'postag:POS'
0.007081 O        b'-1:lemma:Qiagen'
0.007081 O        b'+1:lemma:pcr'
0.006995 O        b'lemma:expression'
0.006995 O        b'-1:lemma:differential'
0.006965 O        b'lemma:final'
0.006769 O        b'lemma:debris'
0.006542 O        b'lemma:unit'
0.006220 O        b'+1:lemma:rifampicin-treated'
0.006060 O        b'-1:lemma:ecolus'
0.005902 O        b'+1:lemma:nitrogen'
0.005565 O        b'lemma:50/50'
0.005565 O        b'+1:lemma:slurry'
0.005517 O        b'+1:lemma:media'
0.005151 O        b'lemma:gadx-8-myc'
0.004853 O        b'-1:lemma:Keseler'
0.004840 O        b'-1:lemma:slurry'
0.004840 O        b'+1:lemma:sepharose'
0.004431 O        b'-1:lemma:1:100'
0.004276 O        b'lemma:differential'
0.004276 O        b'-1:lemma:significant'
0.004276 O        b'+1:lemma:expression'
0.004248 O        b'lemma:next'
0.004248 O        b'+1:lemma:day'
0.004213 O        b'-1:lemma:Files'
0.004204 Air      b'-1:lemma:-lrb-'
0.004136 O        b'lemma:0'
0.003823 O        b'-1:lemma:ng/ml'
0.003769 O        b'lemma:ensure'
0.003769 O        b'+1:lemma:anaerobicity'
0.003632 O        b'-1:lemma:have'
0.003133 O        b'+1:lemma:fur-8myc'
0.003133 O        b'+1:lemma:cra-8myc-tagged'
0.002622 O        b'lemma:repeated'
0.002622 O        b'+1:lemma:element'
0.002547 O        b'+1:lemma:dilute'
0.002488 O        b'-1:lemma:File'
0.002415 O        b'+1:lemma:str'
0.001992 O        b'-1:lemma:Li'
0.001764 O        b'lemma:induce'
0.001498 O        b'lemma:subsequent'
0.001343 O        b'+1:lemma:software'
0.000892 O        b'-1:lemma:\xcb\x9ac'
0.000870 Air      b'postag:NNP'
0.000799 O        b'-1:lemma:result'
0.000742 O        b'-1:lemma:36'
0.000724 O        b'-1:lemma:fur-8-myc'
0.000421 O        b'-1:lemma:twice'
0.000310 O        b'lemma:Biotech'
0.000310 O        b'-1:lemma:Cruz'
0.000150 O        b'+1:lemma:Supplemental'
0.000119 O        b'+1:lemma:mg1655star'
0.000092 O        b'lemma:kit'
0.000092 O        b'-1:lemma:purification'
0.000086 Supp     b'-1:lemma:16'
0.000063 Temp     b'+1:lemma:-lrb-'
0.000052 O        b'+1:lemma:4'
0.000032 O        b'+1:lemma:Affinity'
0.000029 O        b'-1:lemma:normalization'
0.000025 O        b'-1:lemma:sds'
0.000016 O        b'+1:lemma:50/50'
0.000004 O        b'-1:lemma:mapping'
0.000003 O        b'-1:lemma:Biotech'
0.000003 O        b'+1:lemma:sc-28207'
0.000003 O        b'lemma:pellet'
0.000002 O        b'+1:lemma:Trp'
0.000001 O        b'-1:lemma:strategy'
0.000001 O        b'+1:lemma:ChIP-exo'
0.000000 O        b'lemma:study'
0.000000 O        b'-1:lemma:this'
0.000000 O        b'lemma:continuously'
0.000000 O        b'+1:lemma:monitor'
-0.000014 O        b'lemma:affinity'
-0.000356 Supp     b'-1:lemma:10'
-0.000396 O        b'lemma:WT'
-0.000680 Gversion b'+1:lemma:-lrb-'
-0.002845 Med      b'+1:lemma:.'
-0.002845 Med      b'+1:postag:.'
-0.002954 Gtype    b'-1:postag:NNS'
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-0.003274 O        b'lemma:70'
-0.003308 Supp     b'lemma:ph'
-0.003566 O        b'lemma:5'
-0.006151 Gtype    b'+1:postag:NNS'
-0.006783 O        b'-1:lemma:70'
-0.013708 O        b'+1:postag:VBG'
-0.014562 Temp     b'+1:postag:-LRB-'
-0.015198 Supp     b'lemma:.'
-0.015198 Supp     b'postag:.'
-0.019780 Supp     b'-1:lemma:250'
-0.020189 Gversion b'-1:postag:CD'
-0.020231 O        b'+1:lemma:o2'
-0.021111 Supp     b'+1:postag:IN'
-0.021809 O        b'lemma:25'
-0.022614 O        b'+1:lemma:a'
-0.022689 Gtype    b'-1:lemma:crp'
-0.022810 OD       b'postag:NN'
-0.028865 Gtype    b'-1:lemma:,'
-0.028865 Gtype    b'-1:postag:,'
-0.030457 Air      b'-1:lemma:aerobically'
-0.030857 O        b'-1:lemma:control'
-0.032429 Supp     b'lemma:2'
-0.033743 Air      b'lemma:-lrb-'
-0.034961 O        b'-1:lemma:sodium'
-0.040389 O        b'lemma:mg/ml'
-0.040389 O        b'-1:lemma:150'
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-0.041481 Air      b'postag:-LRB-'
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-0.042768 O        b'lemma:pre-cleared'
-0.042916 Gtype    b'-1:postag:SYM'
-0.043229 Supp     b'-1:lemma:300'
-0.044296 Supp     b'-1:lemma:4'
-0.045602 O        b'+1:lemma:='
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-0.053829 O        b'+1:lemma:-lrb-'
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-0.082611 O        b'-1:lemma:ihf'
-0.087748 Supp     b'lemma:and'
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-0.091177 Supp     b'-1:lemma:8'
-0.091888 Supp     b'+1:lemma:of'
-0.094878 O        b'lemma:;'
-0.094878 O        b'-1:lemma:7.6'
-0.095421 O        b'+1:lemma:until'
-0.095631 O        b'lemma:deletion'
-0.098224 O        b'-1:lemma:.'
-0.098224 O        b'-1:postag:.'
-0.098969 Supp     b'lemma:10'
-0.100697 O        b'+1:lemma:.'
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-0.103186 Supp     b'+1:lemma:-rrb-'
-0.103779 O        b'+1:postag:IN'
-0.105134 Med      b'-1:postag:NN'
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-0.106390 O        b'+1:lemma:vol'
-0.106733 OD       b'lemma:2.0'
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-0.109641 O        b'-1:lemma:in'
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-0.116853 O        b'+1:postag:DT'
-0.117140 Phase    b'+1:postag:NN'
-0.117378 O        b'+1:lemma:mutant'
-0.117489 Supp     b'-1:lemma:.'
-0.117489 Supp     b'-1:postag:.'
-0.118117 O        b'-1:lemma:\xce\xb4soxs'
-0.119034 O        b'-1:lemma:cra'
-0.119807 O        b'+1:lemma:rep2'
-0.119807 O        b'+1:lemma:rep1'
-0.120417 O        b'lemma:paraquat'
-0.120775 O        b'-1:lemma:mid-log'
-0.121770 O        b'+1:lemma:mg1655'
-0.121937 O        b'+1:lemma:-lcb-'
-0.130387 O        b'+1:lemma:95'
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-0.134169 OD       b'lemma:='
-0.139348 Supp     b'+1:lemma:final'
-0.140976 O        b'-1:lemma:\xce\xb4oxyr'
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-0.145743 O        b'+1:lemma:1/100'
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-0.153374 O        b'-1:lemma:\xce\xb4ompr'
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-0.554852 Gtype    b'+1:lemma:2'
-0.568879 O        b'lemma:pahse'
-0.573408 Supp     b'+1:lemma:rifampicin'
-0.580780 O        b'+1:lemma:2.0'
-0.586584 Gtype    b'-1:postag:CD'
-0.587966 Supp     b'-1:lemma:-lrb-'
-0.591304 O        b'lemma:fructose'
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-0.594392 O        b'+1:lemma:b'
-0.596267 O        b'+1:lemma:at'
-0.601093 Anti     b'postag:NNP'
-0.605064 O        b'+1:lemma:contain'
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-0.627304 O        b'lemma:sample'
-0.628733 O        b'lemma:20'
-0.628981 Supp     b'-1:postag:VBN'
-0.629515 Gtype    b'-1:lemma:mg1655'
-0.630270 Air      b'-1:lemma:grow'
-0.637091 Supp     b'-1:postag:-LRB-'
-0.640768 OD       b'+1:lemma:2.0'
-0.641798 Supp     b'+1:lemma:dpd'
-0.644183 O        b'lemma:of'
-0.650519 O        b'lemma:chip-exo'
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-0.662621 Temp     b'-1:lemma:\xc2\xb0c'
-0.673236 O        b'-1:lemma:dfnr'
-0.683699 O        b'+1:lemma:arginine'
-0.686299 Agit     b'postag:NN'
-0.688560 O        b'lemma:dissolve'
-0.696622 Supp     b'+1:postag:VBN'
-0.700202 O        b'-1:lemma:1m'
-0.711867 pH       b'postag:NN'
-0.713045 O        b'lemma:\xce\xb4ompr'
-0.722142 Gtype    b'lemma:control'
-0.724305 O        b'+1:lemma:supplement'
-0.742283 O        b'-1:lemma:o2'
-0.764406 O        b'lemma:m'
-0.767605 O        b'+1:lemma:gade'
-0.768389 O        b'lemma:minimal'
-0.769401 O        b'+1:lemma:1m'
-0.773850 Supp     b'-1:postag:NNP'
-0.790400 O        b'+1:lemma:gadw'
-0.793911 O        b'-1:lemma:~'
-0.797218 O        b'-1:lemma:g/l'
-0.797775 Gtype    b'postag:VBG'
-0.800962 O        b'+1:lemma:m'
-0.803760 O        b'-1:lemma:harbor'
-0.805107 O        b'lemma:m63'
-0.805748 Gtype    b'lemma:delta'
-0.849863 O        b'lemma:nh4cl'
-0.862965 O        b'+1:lemma:mm'
-0.864402 O        b'-1:lemma:\xe2\x88\x86'
-0.869669 O        b'lemma:\xce\xb4soxr'
-0.872622 O        b'lemma:methanol'
-0.872733 Phase    b'postag:JJ'
-0.893987 O        b'+1:lemma:genome'
-0.926047 O        b'-1:lemma:dissolve'
-0.926047 O        b'+1:lemma:methanol'
-0.930912 Temp     b'postag:NN'
-0.941212 O        b'lemma:\xce\xb4soxs'
-0.947370 O        b'+1:lemma:nitrate'
-0.961294 Gtype    b'postag::'
-0.968847 O        b'lemma:\xce\xb4oxyr'
-0.975228 Temp     b'+1:postag:IN'
-0.998004 O        b'lemma:37'
-1.013659 O        b'-1:lemma:delta'
-1.026609 O        b'lemma:aerobic'
-1.055392 O        b'lemma:nitrate'
-1.056286 Air      b'postag:NN'
-1.073345 O        b'-1:lemma:30'
-1.078860 Air      b'-1:postag:VBN'
-1.088205 O        b'lemma:nacl'
-1.102987 O        b'-1:lemma:contain'
-1.112354 O        b'lemma:30'
-1.119934 O        b'+1:lemma:g/l'
-1.166887 O        b'+1:lemma:gadx'
-1.172311 O        b'-1:lemma:m'
-1.197029 O        b'-1:lemma:ph'
-1.198964 O        b'-1:lemma:37'
-1.203903 O        b'lemma:\xe2\x88\x86'
-1.209413 O        b'lemma:mid-log'
-1.229416 O        b'-1:lemma:1'
-1.269564 O        b'lemma:media'
-1.272610 Gtype    b'+1:lemma:\xe2\x88\x86'
-1.277180 O        b'-1:postag::'
-1.286337 O        b'-1:lemma:until'
-1.319794 OD       b'+1:postag:NN'
-1.352340 Phase    b'-1:postag:JJ'
-1.358153 O        b'+1:lemma:in'
-1.377189 Supp     b'+1:lemma:acetate'
-1.386688 Supp     b'+1:lemma:,'
-1.386688 Supp     b'+1:postag:,'
-1.437532 Supp     b'+1:postag:-LRB-'
-1.472214 Supp     b'postag:JJ'
-1.517860 O        b'-1:lemma:sample'
-1.521797 O        b'-1:lemma:rpob'
-1.523775 O        b'lemma:wt'
-1.590449 O        b'-1:lemma:co2'
-1.627470 O        b'+1:lemma:+'
-1.650048 Supp     b'+1:lemma:nacl'
-1.671259 O        b'lemma:0.3'
-1.676629 O        b'-1:lemma:2'
-1.701478 O        b'lemma:rifampicin'
-1.728695 O        b'-1:lemma:fresh'
-1.810523 O        b'-1:lemma:ml'
-1.849433 O        b'-1:lemma:IP'
-1.933305 O        b'+1:lemma:hour'
-1.999420 Supp     b'+1:lemma:-lrb-'
-2.023935 O        b'+1:lemma:1'
-2.158996 O        b'+1:lemma:2'
-2.196665 Temp     b'+1:lemma:with'
-2.355362 O        b'lemma:aerobically'
-2.371808 O        b'-1:lemma:vol'
-2.975466 O        b'-1:lemma:_'
-3.464830 O        b'-1:lemma::'