********** TRAINING AND TESTING REPORT **********
Training file: training-data-set-70-NER.txt

best params:{'c1': 0.08615770645096285, 'c2': 0.01687404693435442}
best CV score:0.8504521104958047
model size: 0.15M

Flat F1: 0.8176390283954057
             precision    recall  f1-score   support

         OD      1.000     1.000     1.000        21
         pH      1.000     1.000     1.000        10
  Technique      1.000     1.000     1.000        33
        Med      1.000     0.821     0.902        56
       Temp      1.000     0.800     0.889        15
       Vess      0.000     0.000     0.000         0
       Agit      0.000     0.000     0.000         7
      Phase      1.000     0.762     0.865        21
        Air      0.600     0.580     0.590        88
       Anti      0.929     1.000     0.963        13
     Strain      0.000     0.000     0.000         0
      Gtype      0.910     0.782     0.841        78
  Substrain      0.000     0.000     0.000         0
       Supp      0.864     0.838     0.851       136
   Gversion      1.000     0.500     0.667         6

avg / total      0.858     0.785     0.818       484


Top likely transitions:
Temp   -> Temp    5.906933
Anti   -> Anti    5.890411
Med    -> Med     5.455490
Phase  -> Phase   5.444663
OD     -> OD      5.039735
Gtype  -> Gtype   4.805966
Gversion -> Gversion 4.649609
Supp   -> Supp    4.370866
Technique -> Technique 4.106954
pH     -> pH      3.816081
O      -> O       2.894476
Air    -> Air     2.841339
Agit   -> Agit    1.872583
Substrain -> Gtype   1.512615
O      -> Technique 0.451626
Technique -> Air     0.408489
Gtype  -> Supp    0.278289
O      -> Gtype   0.174729
Gtype  -> pH      0.107846
Anti   -> Gtype   -0.000009
Phase  -> Air     -0.002663
O      -> Gversion -0.007875
Anti   -> Supp    -0.008877
Gversion -> O       -0.035837
Gtype  -> Temp    -0.040591
O      -> Phase   -0.057400
Supp   -> Air     -0.063800
Air    -> Agit    -0.109162
Med    -> Air     -0.122959
O      -> Supp    -0.129454
Phase  -> O       -0.135331
OD     -> Supp    -0.142630
Gtype  -> Technique -0.166366
Technique -> Gtype   -0.261044
Air    -> Temp    -0.274766
O      -> Anti    -0.279796
Agit   -> Air     -0.290087
Air    -> Phase   -0.307675
Technique -> O       -0.319769
Air    -> O       -0.379740
O      -> Temp    -0.504307
Med    -> O       -0.542307
Supp   -> O       -0.553768
O      -> Med     -0.636484
Air    -> Supp    -0.655629
Supp   -> Med     -0.683056
O      -> OD      -0.745004
Phase  -> OD      -0.759334
Temp   -> Med     -0.769327
OD     -> O       -0.921100
OD     -> Air     -1.011721
Technique -> pH      -1.215411
Substrain -> O       -1.508799
Gtype  -> O       -1.582015
Med    -> Supp    -2.036289
O      -> Air     -2.531455


Top unlikely transitions:
Temp   -> Temp    5.906933
Anti   -> Anti    5.890411
Med    -> Med     5.455490
Phase  -> Phase   5.444663
OD     -> OD      5.039735
Gtype  -> Gtype   4.805966
Gversion -> Gversion 4.649609
Supp   -> Supp    4.370866
Technique -> Technique 4.106954
pH     -> pH      3.816081
O      -> O       2.894476
Air    -> Air     2.841339
Agit   -> Agit    1.872583
Substrain -> Gtype   1.512615
O      -> Technique 0.451626
Technique -> Air     0.408489
Gtype  -> Supp    0.278289
O      -> Gtype   0.174729
Gtype  -> pH      0.107846
Anti   -> Gtype   -0.000009
Phase  -> Air     -0.002663
O      -> Gversion -0.007875
Anti   -> Supp    -0.008877
Gversion -> O       -0.035837
Gtype  -> Temp    -0.040591
O      -> Phase   -0.057400
Supp   -> Air     -0.063800
Air    -> Agit    -0.109162
Med    -> Air     -0.122959
O      -> Supp    -0.129454
Phase  -> O       -0.135331
OD     -> Supp    -0.142630
Gtype  -> Technique -0.166366
Technique -> Gtype   -0.261044
Air    -> Temp    -0.274766
O      -> Anti    -0.279796
Agit   -> Air     -0.290087
Air    -> Phase   -0.307675
Technique -> O       -0.319769
Air    -> O       -0.379740
O      -> Temp    -0.504307
Med    -> O       -0.542307
Supp   -> O       -0.553768
O      -> Med     -0.636484
Air    -> Supp    -0.655629
Supp   -> Med     -0.683056
O      -> OD      -0.745004
Phase  -> OD      -0.759334
Temp   -> Med     -0.769327
OD     -> O       -0.921100
OD     -> Air     -1.011721
Technique -> pH      -1.215411
Substrain -> O       -1.508799
Gtype  -> O       -1.582015
Med    -> Supp    -2.036289
O      -> Air     -2.531455


Top positive:
6.133096 Anti     b'-2:lemma:antibody'
4.866769 Gtype    b'hGreek'
4.351485 Gtype    b'-2:lemma:genotype/variation'
4.283983 O        b'-2:lemma:_'
4.152546 Phase    b'-2:lemma:phase'
4.011076 Air      b'lemma:anaerobic'
3.886715 O        b'lemma:_'
3.886715 O        b'word:_'
3.414280 Supp     b'-2:lemma:shake'
3.353143 Gtype    b'word:WT'
3.296821 Air      b'word:Aerobic'
3.237785 Air      b'postag:RB'
3.181640 Gtype    b'-2:lemma:genotype'
3.111076 Technique b'word:ChIPSeq'
3.090628 O        b'+2:lemma:\xc2\xb0c'
2.994375 O        b'lemma:-'
2.994375 O        b'word:-'
2.977634 Med      b'word:LB'
2.970425 Gtype    b'-2:lemma:affyexp'
2.950168 Supp     b'lemma:pq'
2.950168 Supp     b'word:PQ'
2.936267 Air      b'word:Anaerobic'
2.916857 O        b'postag:VBG'
2.872038 O        b'lemma:1'
2.872038 O        b'word:1'
2.859678 O        b'lemma:.'
2.859678 O        b'postag:.'
2.859678 O        b'word:.'
2.847838 Gtype    b'lemma:wt'
2.843523 Supp     b'lemma:nh4cl'
2.828634 Technique b'lemma:chipseq'
2.770256 O        b'word:Cra'
2.754330 Supp     b'-1:ner:SUPP'
2.740638 Gtype    b'lemma:type'
2.740638 Gtype    b'word:type'
2.710603 Supp     b'lemma:no3'
2.710603 Supp     b'word:NO3'
2.696641 Gtype    b'-1:ner:GEN'
2.690596 O        b'-1:lemma:lb'
2.660908 Phase    b'postag:NN'
2.485934 O        b'lemma:2'
2.485934 O        b'word:2'
2.472392 O        b'word:A'
2.467857 Substrain b'-2:lemma:substr'
2.462741 O        b'postag::'
2.443045 O        b'lemma:3'
2.443045 O        b'word:3'
2.389907 Supp     b'+2:lemma:iptg'
2.380274 Technique b'word:ChIP-exo'
2.349013 Air      b'lemma:aerobic'
2.322550 Supp     b'lemma:Iron'
2.322550 Supp     b'word:Iron'
2.322550 Supp     b'+1:word:Deficient'
2.322550 Supp     b'-2:lemma:Anaerobic'
2.278979 Med      b'lemma:MOPS'
2.278979 Med      b'word:MOPS'
2.272848 O        b'-1:postag:NNS'
2.259162 Supp     b'+2:lemma:rifampicin'
2.257486 Supp     b'+1:lemma:\xc2\xb5m'
2.257486 Supp     b'+1:word:\xc2\xb5M'
2.246997 Med      b'+2:postag:CC'
2.228780 Air      b'-1:lemma:ChIP-Seq'
2.228780 Air      b'-1:word:ChIP-Seq'
2.207265 Technique b'+2:lemma:ph5'
2.139970 Gversion b'lemma:chip-seq'
2.126001 O        b'+2:lemma:crp'
2.119555 Supp     b'-2:lemma:media'
2.107433 O        b'lemma:with'
2.107433 O        b'word:with'
2.089619 pH       b'+1:postag:CD'
2.087879 Technique b'hUpper'
2.087853 Supp     b'lemma:arginine'
2.083830 Phase    b'lemma:mid-log'
2.083830 Phase    b'word:mid-log'
2.073689 O        b'lemma:at'
2.055570 O        b'-1:word:Aerobic'
2.048501 O        b'-2:lemma:flagtag'
2.044672 Strain   b'lemma:k-12'
2.044672 Strain   b'word:K-12'
2.027579 O        b'lemma:b'
2.027579 O        b'word:B'
2.026475 Gversion b'word:ChIP-Seq'
1.999937 Supp     b'lemma:2h'
1.999937 Supp     b'-1:lemma:additional'
1.999937 Supp     b'word:2h'
1.999937 Supp     b'-1:word:additional'
1.990484 O        b'-2:lemma:myc'
1.978883 Gtype    b'lemma:pk4854'
1.978883 Gtype    b'word:PK4854'
1.946221 Technique b'word:ChIP-Seq'
1.943837 O        b'+1:postag:RB'
1.933471 O        b'-1:lemma:tag'
1.930064 Air      b'lemma:aerobically'
1.930064 Air      b'word:aerobically'
1.927579 Supp     b'+2:lemma:feso4'
1.909755 Supp     b'-1:word:Cra'
1.873905 Air      b'postag:JJ'
1.856798 O        b'-2:lemma:overnight'
1.855377 Gtype    b'+1:lemma:type'
1.855377 Gtype    b'+1:word:type'
1.847181 O        b'postag:IN'
1.846521 O        b'-1:word:Anaerobic'
1.840479 Substrain b'lemma:mg1655'
1.840479 Substrain b'word:MG1655'
1.819211 Med      b'+2:lemma:b2'
1.796914 Temp     b'-1:lemma:sample'
1.793789 Phase    b'+2:lemma:o.d.'
1.779664 Air      b'-2:lemma:fnr'
1.777854 O        b'lemma:rpob'
1.777854 O        b'word:RpoB'
1.768414 Supp     b'-2:lemma:for'
1.726595 O        b'-2:lemma:medium'
1.703385 Temp     b'-1:word:sample'
1.696157 Air      b'-1:lemma:-'
1.696157 Air      b'-1:word:-'
1.693110 Technique b'-2:lemma:wt'
1.688833 Supp     b'-1:lemma:+'
1.688833 Supp     b'-1:word:+'
1.678213 O        b'-1:lemma:0.3'
1.678213 O        b'-1:word:0.3'
1.671180 Supp     b'lemma:iptg'
1.671180 Supp     b'word:IPTG'
1.669100 Gtype    b'lemma:dfnr'
1.669100 Gtype    b'word:dFNR'
1.663938 Supp     b'lemma:Adenine'
1.663938 Supp     b'word:Adenine'
1.650649 Temp     b'+1:lemma:\xc2\xb0c'
1.650649 Temp     b'+1:word:\xc2\xb0C'
1.645769 O        b'-2:lemma:='
1.613900 O        b'postag:VBN'
1.595925 O        b'-2:lemma:co2'
1.595619 Technique b'lemma:rna-seq'
1.594938 O        b'-1:word:tag'
1.589275 Substrain b'+1:lemma:phtpg'
1.589275 Substrain b'+1:word:PhtpG'
1.572406 Supp     b'-1:lemma:Cra'
1.569971 Temp     b'-1:lemma:37'
1.569971 Temp     b'-1:word:37'
1.568883 O        b'+1:lemma:fnr-8myc'
1.568883 O        b'+1:word:Fnr-8myc'
1.551755 Air      b'-1:lemma:co2'
1.551755 Air      b'-1:word:CO2'
1.542292 O        b'word:OmpR'
1.539246 Supp     b'-2:postag:VBG'
1.538601 O        b'-2:lemma:fructose'
1.534559 O        b'lemma::'
1.534559 O        b'word::'
1.532843 Agit     b'lemma:rpm'
1.532843 Agit     b'word:rpm'
1.532294 Air      b'lemma:anaeroibc'
1.532294 Air      b'word:Anaeroibc'
1.531352 Technique b'lemma:ChIP-exo'
1.519802 pH       b'lemma:ph5'
1.519802 pH       b'+1:lemma:.5'
1.519802 pH       b'word:pH5'
1.519802 pH       b'+1:word:.5'
1.509712 Agit     b'-1:lemma:250'
1.509712 Agit     b'-1:word:250'
1.500435 O        b'-1:lemma:type'
1.500435 O        b'-1:word:type'
1.500020 Gtype    b'postag:JJ'
1.486577 O        b'+1:word:ChIP-Seq'
1.486092 Supp     b'-2:lemma:induce'
1.483999 Temp     b'lemma:\xc2\xb0c'
1.483999 Temp     b'word:\xc2\xb0C'
1.472805 Air      b'-2:lemma:IP'
1.472734 Gtype    b'+1:postag::'
1.470847 O        b'lemma:chip'
1.465385 Supp     b'-2:lemma:argr'
1.464940 Supp     b'lemma:acetate'
1.464940 Supp     b'word:acetate'
1.448735 Gtype    b'-1:lemma:\xe2\x88\x86'
1.448735 Gtype    b'-1:word:\xe2\x88\x86'
1.440604 Gversion b'-2:lemma:build'
1.432712 Supp     b'lemma:nacl'
1.432712 Supp     b'word:NaCl'
1.429549 Med      b'+2:lemma:+'
1.422406 Technique b'lemma:rnaseq'
1.422406 Technique b'word:RNASeq'
1.415855 Med      b'+2:lemma:b1'
1.412456 O        b'lemma:\xcf\x8332'
1.412456 O        b'word:\xcf\x8332'
1.402242 O        b'-1:lemma:anaerobic'
1.394459 Gversion b'-2:postag:VB'
1.393649 Supp     b'+1:lemma:2'
1.393649 Supp     b'+1:word:2'
1.393192 O        b'+1:word:WT'
1.391119 O        b'lemma:Cra'
1.390325 OD       b'lemma:od450'
1.390325 OD       b'word:OD450'
1.390325 OD       b'-1:word:At'
1.388033 Gtype    b'-1:lemma:nsrr'
1.388033 Gtype    b'+1:lemma:flagtag'
1.388033 Gtype    b'-1:word:NsrR'
1.388033 Gtype    b'+1:word:Flagtag'
1.387297 Supp     b'lemma:Leu'
1.387297 Supp     b'word:Leu'
1.387297 Supp     b'-2:lemma:Lrp'
1.384578 O        b'lemma:for'
1.375430 Gtype    b'lemma:wild-type'
1.375277 Vess     b'lemma:flask'
1.375277 Vess     b'-1:lemma:warm'
1.375277 Vess     b'word:flask'
1.375277 Vess     b'-1:word:warmed'
1.375277 Vess     b'-2:lemma:pre'
1.375277 Vess     b'+2:lemma:43'
1.368864 Gtype    b'+2:lemma:glucose'
1.365809 O        b'+1:lemma:wt'
1.360287 Phase    b'lemma:stationary'
1.360287 Phase    b'word:stationary'
1.360287 Phase    b'lemma:exponential'
1.360287 Phase    b'word:exponential'
1.360038 O        b'lemma:rep2'
1.360038 O        b'word:rep2'
1.360038 O        b'lemma:rep1'
1.360038 O        b'word:rep1'
1.341248 Supp     b'-1:word:OmpR'
1.338399 Supp     b'-2:lemma:20'
1.324467 Med      b'lemma:LB'
1.315820 O        b'lemma:culture'
1.307805 Air      b'-2:lemma:nh4cl'
1.303548 Air      b'word:anaerobic'
1.300770 Med      b'lemma:media'
1.300770 Med      b'word:media'
1.299451 O        b'lemma:CEL'
1.299451 O        b'word:CEL'
1.292116 Gtype    b'lemma:\xe2\x88\x86'
1.292116 Gtype    b'word:\xe2\x88\x86'
1.290198 Supp     b'-1:lemma:with'
1.290198 Supp     b'-1:word:with'
1.290158 O        b'-1:lemma:into'
1.290158 O        b'-1:word:into'
1.287492 O        b'+1:lemma:coli'
1.287492 O        b'+1:word:coli'
1.286042 O        b'+1:lemma:od600'
1.286042 O        b'+1:word:OD600'
1.284490 O        b'lemma:harbor'
1.284490 O        b'word:harboring'
1.279859 O        b'-1:lemma:glucose'
1.279859 O        b'-1:word:glucose'
1.263526 Supp     b'-1:lemma:vol'
1.263526 Supp     b'-1:word:vol'
1.263526 Supp     b'-2:lemma:1/100'
1.263526 Supp     b'+2:lemma:1m'
1.262245 Supp     b'+1:lemma:1'
1.262245 Supp     b'+1:word:1'
1.250611 Supp     b'-1:postag:CD'
1.243937 Med      b'+1:lemma:0.4'
1.243937 Med      b'+1:word:0.4'
1.233193 Med      b'lemma:m63'
1.233193 Med      b'word:M63'
1.222698 Gtype    b'lemma:arca8myc'
1.222698 Gtype    b'word:ArcA8myc'
1.222698 Gtype    b'-2:lemma:chip-arca'
1.220249 Substrain b'lemma:mg1655star'
1.220249 Substrain b'word:MG1655star'
1.215750 O        b'+1:postag:NNP'
1.204021 Supp     b'lemma:fructose'
1.204021 Supp     b'word:fructose'
1.201023 Temp     b'lemma:43'
1.201023 Temp     b'word:43'
1.192241 O        b'word:C'
1.189915 O        b'-1:lemma:media'
1.189915 O        b'-1:word:media'
1.181862 O        b'lemma:genotype/variation'
1.181862 O        b'word:genotype/variation'
1.176305 Anti     b'+1:lemma:antibody'
1.176305 Anti     b'+1:word:antibody'
1.157252 Supp     b'-2:lemma:supplement'
1.157008 O        b'-2:ner:MED'
1.152293 Gtype    b'-1:postag:VBG'
1.151161 Gtype    b'lemma:\xce\xb4fur'
1.151161 Gtype    b'word:\xce\x94fur'
1.142949 O        b'-2:lemma:37'
1.137137 Supp     b'-2:lemma:10'
1.136643 O        b'-2:lemma:ChIP-Seq'
1.132513 Med      b'-2:lemma:minimal'
1.130951 O        b'lemma:ompr'
1.129317 Anti     b'-2:lemma:polymerase'
1.123998 O        b'-1:lemma:\xc2\xb0c'
1.123998 O        b'-1:word:\xc2\xb0C'
1.118961 O        b'+2:lemma:constant'
1.116791 Air      b'-2:lemma:cm20'
1.116398 Gversion b'lemma:u00096'
1.116398 Gversion b'+1:lemma:.2'
1.116398 Gversion b'word:U00096'
1.116398 Gversion b'+1:word:.2'
1.115803 O        b'word:Lrp'
1.115707 Supp     b'+1:word:was'
1.112971 O        b'-1:lemma:pq'
1.112971 O        b'-1:word:PQ'
1.110160 O        b'-1:lemma:ChIP-exo'
1.109068 Phase    b'-2:lemma:until'
1.103237 Temp     b'-1:lemma:\xcf\x8332'
1.103237 Temp     b'-1:word:\xcf\x8332'
1.103073 O        b'lemma:a'
1.101876 Supp     b'+1:lemma:Deficient'
1.087470 Gtype    b'lemma:deltaseqa'
1.087470 Gtype    b'-1:lemma:old'
1.087470 Gtype    b'word:deltaSeqA'
1.087470 Gtype    b'-1:word:old'
1.087470 Gtype    b'-2:lemma:seqa'
1.080924 Supp     b'+2:lemma:-lrb-'
1.076227 O        b'symb'
1.071865 Supp     b'-1:lemma:ompr'
1.068638 Supp     b'lemma:dpd'
1.068638 Supp     b'word:DPD'
1.067779 Agit     b'lemma:250'
1.067779 Agit     b'word:250'
1.067539 Supp     b'+2:lemma:A'
1.065738 Gversion b'lemma:.2'
1.065738 Gversion b'-1:lemma:u00096'
1.065738 Gversion b'word:.2'
1.065738 Gversion b'-1:word:U00096'
1.064221 Gtype    b'-1:postag:VBP'
1.062276 Gtype    b'-2:lemma:delta'
1.062185 Supp     b'postag:NNP'
1.061314 Med      b'isUpper'
1.055858 Gtype    b'-1:lemma:rpob'
1.055858 Gtype    b'-1:word:RpoB'
1.049479 O        b'-1:word:ChIP-exo'
1.042850 O        b'lemma:purr'
1.042850 O        b'word:PurR'
1.036936 Temp     b'-1:lemma:43'
1.036936 Temp     b'-1:word:43'
1.036057 O        b'+1:lemma:\xe2\x88\x86'
1.036057 O        b'+1:word:\xe2\x88\x86'
1.031873 O        b'word:for'
1.019402 Strain   b'-2:lemma:strain'
1.014975 O        b'-2:lemma:\xe2\x88\x86'
1.013115 Temp     b'-2:lemma:\xcf\x8332'
1.008777 O        b'postag:CC'
1.003566 Gversion b'lemma:000913'
1.003566 Gversion b'word:000913'
1.003566 Gversion b'-2:lemma:nc'
0.999090 Med      b'lemma:minimal'
0.999090 Med      b'word:minimal'
0.997154 Supp     b'lemma:Fe'
0.997154 Supp     b'word:Fe'
0.996596 Strain   b'+1:lemma:substr'
0.996596 Strain   b'+1:word:substr'
0.996596 Strain   b'-2:lemma:str'
0.989286 Agit     b'+1:lemma:rpm'
0.989286 Agit     b'+1:word:rpm'
0.986230 O        b'+1:lemma:0.2'
0.986230 O        b'+1:word:0.2'
0.985273 Vess     b'-1:postag:VBN'
0.982856 Med      b'lemma:medium'
0.982856 Med      b'word:medium'
0.980443 Med      b'+2:lemma:then'
0.980127 Temp     b'-2:postag:VBD'
0.975997 Air      b'+2:lemma:%'
0.974764 O        b'+1:ner:MED'
0.962855 O        b'+1:lemma:pq'
0.962855 O        b'+1:word:PQ'
0.954829 Gtype    b'-1:lemma:wild'
0.954829 Gtype    b'-1:word:wild'
0.951270 Gtype    b'hUpper'
0.948258 O        b'-2:lemma:~'
0.947986 O        b'lemma:chip-fnr'
0.947986 O        b'word:chip-Fnr'
0.947986 O        b'+2:lemma:fnr8myc'
0.945902 pH       b'lemma:5.5'
0.945902 pH       b'word:5.5'
0.944510 O        b'-1:word:WT'
0.943862 Gtype    b'+2:lemma::'
0.942721 OD       b'lemma:0.3'
0.942721 OD       b'word:0.3'
0.937918 Anti     b'+2:lemma:antibody'
0.937630 Supp     b'lemma:glutamine'
0.937630 Supp     b'-1:lemma:2g/l'
0.937630 Supp     b'word:glutamine'
0.937630 Supp     b'-1:word:2g/L'
0.935305 Gtype    b'-1:lemma:ptac'
0.935305 Gtype    b'-1:word:Ptac'
0.934351 O        b'+2:lemma:wt'
0.930435 OD       b'+1:postag:IN'
0.929668 Med      b'+1:lemma:minimal'
0.929668 Med      b'+1:word:minimal'
0.928186 Supp     b'-1:postag:IN'
0.926783 Air      b'-2:lemma:%'
0.921690 Supp     b'+2:postag:-LRB-'
0.919421 O        b'-2:lemma:min'
0.916940 Vess     b'-2:postag:JJ'
0.915904 O        b'lemma:soxr'
0.915904 O        b'word:SoxR'
0.915904 O        b'lemma:soxs'
0.915904 O        b'word:SoxS'
0.913834 Technique b'-1:lemma:chip-exo'
0.912072 Technique b'-2:postag:NNP'
0.910228 Supp     b'-2:lemma:purr'
0.907191 Supp     b'lemma:glucose'
0.907191 Supp     b'word:glucose'
0.904427 O        b'+2:lemma:allow'
0.903850 Phase    b'-1:lemma:mid-log'
0.903850 Phase    b'-1:word:mid-log'
0.901276 O        b'-2:lemma:twice'
0.894197 Gversion b'lemma:nc'
0.894197 Gversion b'word:NC'
0.894197 Gversion b'+2:lemma:000913'
0.892873 Substrain b'-1:lemma:.'
0.892873 Substrain b'-1:postag:.'
0.892873 Substrain b'-1:word:.'
0.892583 Supp     b'+1:lemma:_'
0.892583 Supp     b'+1:word:_'
0.891349 Technique b'-1:lemma:_'
0.891349 Technique b'-1:word:_'
0.890995 Med      b'+1:lemma:2.0'
0.890995 Med      b'+1:word:2.0'
0.878437 Temp     b'lemma:37'
0.878437 Temp     b'word:37'
0.871098 O        b'-1:lemma:nacl'
0.871098 O        b'-1:word:NaCl'
0.867443 O        b'-1:lemma:min'
0.867443 O        b'-1:word:min'
0.862593 O        b'+1:lemma:250'
0.862593 O        b'+1:word:250'
0.861276 O        b'lemma:chip-arca'
0.861276 O        b'word:chip-ArcA'
0.861276 O        b'+2:lemma:arca8myc'
0.860534 Gtype    b'-2:postag:JJ'
0.856777 O        b'lemma:argr'
0.856777 O        b'word:ArgR'
0.851912 Technique b'-1:lemma:input'
0.851912 Technique b'-1:word:Input'
0.844181 Phase    b'-1:lemma:until'
0.844181 Phase    b'-1:word:until'
0.834934 Technique b'hLower'
0.829578 Med      b'-2:postag:JJ'
0.828713 Supp     b'-1:lemma:mm'
0.828713 Supp     b'-1:word:mM'
0.826930 Substrain b'+2:lemma::'
0.826516 O        b'+1:postag:VBN'
0.825524 Gtype    b'+2:lemma:rep2'
0.825524 Gtype    b'+2:lemma:rep1'
0.821297 Gtype    b'+1:lemma:control'
0.821297 Gtype    b'+1:word:control'
0.818972 Gversion b'-2:lemma:genome'
0.816223 O        b'lemma:trpr'
0.816223 O        b'word:TrpR'
0.812195 O        b'+2:postag:JJ'
0.811723 Gtype    b'lemma:fnr8myc'
0.811723 Gtype    b'word:Fnr8myc'
0.811723 Gtype    b'-2:lemma:chip-fnr'
0.811448 O        b'-1:lemma:nitrate'
0.811448 O        b'-1:word:nitrate'
0.808468 Gtype    b'-2:lemma:dna'
0.808307 O        b'+2:ner:_'
0.807569 O        b'-2:lemma:ml'
0.807478 O        b'+2:lemma:_'
0.807343 O        b'lemma:from'
0.807343 O        b'word:from'
0.804028 Technique b'+2:lemma:-rrb-'
0.797775 O        b'-1:lemma:-80'
0.797775 O        b'-1:word:-80'
0.797515 O        b'lemma:-lrb-'
0.797515 O        b'word:-LRB-'
0.793641 Air      b'-2:postag:CD'
0.793427 Supp     b'lemma:rifampicin'
0.793427 Supp     b'word:rifampicin'
0.791861 Technique b'+2:postag:-RRB-'
0.790575 Gtype    b'+2:ner:SUPP'
0.787664 pH       b'+1:lemma:5.5'
0.787664 pH       b'+1:word:5.5'
0.787517 O        b'-1:lemma:acetate'
0.787517 O        b'-1:word:acetate'
0.783789 O        b'lemma:affyexp'
0.783789 O        b'word:affyexp'
0.780016 Vess     b'+1:lemma:at'
0.780016 Vess     b'+1:word:at'
0.775345 O        b'+1:word:were'
0.774874 Technique b'-1:lemma:rna-seq'
0.774874 Technique b'-1:word:RNA-seq'
0.773142 O        b'lemma:~'
0.773142 O        b'word:~'
0.772519 Supp     b'word:NH4Cl'
0.771308 O        b'-2:lemma:250'
0.768498 O        b'-1:lemma:antibody'
0.768498 O        b'-1:word:antibody'
0.762578 OD       b'-1:lemma:od450'
0.762578 OD       b'-1:word:OD450'
0.761528 Technique b'+1:lemma:chip-exo'
0.761436 Gtype    b'lemma:nsrr'
0.761436 Gtype    b'word:NsrR'
0.761436 Gtype    b'+2:lemma:flagtag'
0.759984 Gtype    b'-2:lemma:-rcb-'
0.759814 O        b'+1:lemma:rifampicin'
0.759814 O        b'+1:word:rifampicin'
0.759787 O        b'isNumber'
0.757953 Technique b'+1:word:ChIP-exo'
0.753172 O        b'-1:ner:_'
0.751066 Gtype    b'+1:lemma:_'
0.751066 Gtype    b'+1:word:_'
0.750872 Technique b'+1:lemma:rna-seq'
0.750872 Technique b'+1:word:RNA-seq'
0.749193 Air      b'-1:postag::'
0.747520 Gversion b'lemma:asm584v2'
0.747520 Gversion b'word:ASM584v2'
0.746958 Supp     b'-1:lemma:respiration'
0.746958 Supp     b'+1:lemma:mmol'


Top negative:
-0.031503 O        b'-1:word:with'
-0.032937 O        b'-1:word:to'
-0.033129 O        b'+1:lemma:1/100'
-0.033129 O        b'+1:word:1/100'
-0.033129 O        b'-2:lemma:sodium'
-0.033129 O        b'+2:lemma:vol'
-0.033571 Supp     b'+1:lemma:dpd'
-0.033571 Supp     b'+1:word:DPD'
-0.033914 O        b'-1:lemma:rifampicin'
-0.033914 O        b'-1:word:rifampicin'
-0.034471 O        b'+2:lemma:fecl2'
-0.035113 OD       b'+1:lemma:0.4'
-0.035113 OD       b'+1:word:0.4'
-0.036519 O        b'-1:lemma:IP'
-0.036519 O        b'-1:word:IP'
-0.036985 Air      b'-2:lemma:-rrb-'
-0.037543 Air      b'-2:lemma:be'
-0.038631 O        b'+2:postag:IN'
-0.039447 Supp     b'+2:lemma:and'
-0.040538 OD       b'isLower'
-0.041337 O        b'-1:lemma:.'
-0.041337 O        b'-1:postag:.'
-0.041337 O        b'-1:word:.'
-0.041678 Supp     b'-1:lemma:250'
-0.041678 Supp     b'-1:word:250'
-0.042501 O        b'-2:lemma:nh4cl'
-0.042564 O        b'lemma:;'
-0.042564 O        b'-1:lemma:7.6'
-0.042564 O        b'word:;'
-0.042564 O        b'-1:word:7.6'
-0.042782 Supp     b'-2:lemma:.'
-0.042782 Supp     b'-2:postag:.'
-0.042888 O        b'+2:lemma:total'
-0.043621 Supp     b'lemma:10'
-0.043621 Supp     b'word:10'
-0.044379 Supp     b'-2:postag:JJ'
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-0.046488 Air      b'-1:postag:VBN'
-0.047462 Supp     b'+1:postag:VBN'
-0.049122 O        b'-1:postag:DT'
-0.049637 O        b'+1:lemma:mm'
-0.049637 O        b'+1:word:mM'
-0.049637 O        b'+1:ner:KWSUPP'
-0.050780 Supp     b'+1:lemma:acetate'
-0.050780 Supp     b'+1:word:acetate'
-0.051111 O        b'-1:lemma:g/l'
-0.051111 O        b'-1:word:g/L'
-0.051431 OD       b'+2:lemma:0.4'
-0.052347 OD       b'postag:NN'
-0.052430 O        b'+1:word:a'
-0.052490 Supp     b'isNumber'
-0.052616 Supp     b'-1:lemma:dpd'
-0.052616 Supp     b'-1:word:DPD'
-0.052732 O        b'lemma:glucose'
-0.052732 O        b'word:glucose'
-0.054624 pH       b'isNumber'
-0.056626 O        b'-2:lemma:fnr'
-0.056876 O        b'-2:lemma:mg1655'
-0.057408 Supp     b'postag:IN'
-0.057925 Gversion b'hUpper'
-0.058675 Air      b'isUpper'
-0.058981 O        b'+1:lemma:a'
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-0.064355 Supp     b'+2:postag:NN'
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-0.065297 O        b'-1:lemma:1'
-0.065297 O        b'-1:word:1'
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-0.066307 Supp     b'-1:postag:VBN'
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-0.070479 Supp     b'word:1'
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-0.072709 O        b'-1:word:ml'
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-0.074784 O        b'+1:lemma:minimal'
-0.074784 O        b'+1:word:minimal'
-0.075700 Vess     b'-2:ner:_'
-0.076400 OD       b'+1:lemma:='
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-0.080558 Supp     b'-2:lemma:glucose'
-0.081115 Gversion b'-1:postag:NN'
-0.082489 Supp     b'-1:lemma:10'
-0.082489 Supp     b'-1:word:10'
-0.082904 OD       b'+2:lemma:2.0'
-0.083844 Gtype    b'-1:lemma:,'
-0.083844 Gtype    b'-1:postag:,'
-0.083844 Gtype    b'-1:word:,'
-0.084143 O        b'-2:lemma:100'
-0.084860 O        b'+1:lemma:fecl2'
-0.084860 O        b'+1:word:FeCl2'
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-0.087219 O        b'-1:word:Sodium'
-0.087219 O        b'+2:lemma:1/100'
-0.087684 Technique b'+2:ner:_'
-0.087995 O        b'+1:lemma:_'
-0.087995 O        b'+1:word:_'
-0.088143 O        b'+1:lemma:\xc2\xb0c'
-0.088143 O        b'+1:word:\xc2\xb0C'
-0.091969 O        b'lemma:final'
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-0.092853 O        b'+1:lemma:300'
-0.092853 O        b'+1:word:300'
-0.095032 O        b'lemma:dissolve'
-0.095032 O        b'word:dissolved'
-0.095032 O        b'+2:lemma:methanol'
-0.095090 O        b'-1:lemma:mm'
-0.095090 O        b'-1:word:mM'
-0.095113 O        b'+2:postag:CD'
-0.095153 O        b'+2:lemma:then'
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-0.097911 O        b'+1:lemma:sample'
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-0.099484 Supp     b'+2:lemma:glucose'
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-0.100314 O        b'lemma:7.6'
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-0.102235 Med      b'-1:postag:CD'
-0.104921 Temp     b'-2:postag:CD'
-0.105970 Temp     b'symb'
-0.109431 O        b'+2:lemma:media'
-0.112371 O        b'lemma:ph'
-0.112371 O        b'word:pH'
-0.114252 Supp     b'lemma:paraquat'
-0.114252 Supp     b'word:paraquat'
-0.114252 Supp     b'-2:lemma:um'
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-0.115247 O        b'-1:lemma:final'
-0.115247 O        b'-1:word:final'
-0.115916 O        b'lemma:250'
-0.115916 O        b'word:250'
-0.116551 O        b'-1:lemma:o2'
-0.116551 O        b'-1:word:O2'
-0.116611 O        b'+2:lemma:nitrate'
-0.121653 O        b'+1:lemma:5'
-0.121653 O        b'+1:word:5'
-0.122048 pH       b'-2:ner:_'
-0.122099 O        b'-2:lemma:n2'
-0.122254 O        b'+2:lemma:at'
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-0.123163 O        b'-1:word:fresh'
-0.124408 Supp     b'-2:lemma:0.2'
-0.124721 Gversion b'-2:postag:NN'
-0.124936 O        b'lemma:n2'
-0.124936 O        b'word:N2'
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-0.126633 Air      b'-2:postag:-RRB-'
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-0.128117 Supp     b'+1:word:-RRB-'
-0.128504 O        b'+2:lemma:agitation'
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-0.140764 O        b'word:150'
-0.140764 O        b'+1:word:mg/mL'
-0.140764 O        b'-2:lemma:concentration'
-0.141658 Supp     b'+2:lemma:dpd'
-0.141998 O        b'+2:lemma:reference'
-0.142959 O        b'+2:lemma:10'
-0.143470 Supp     b'-2:lemma:-lrb-'
-0.144726 O        b'-2:lemma:g/l'
-0.144757 O        b'+1:lemma:-lrb-'
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-0.149628 O        b'-2:postag:-LRB-'
-0.152840 O        b'lemma:nacl'
-0.152840 O        b'word:NaCl'
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-0.158101 O        b'lemma:1m'
-0.158101 O        b'word:1M'
-0.160002 O        b'+2:lemma:follow'
-0.160041 O        b'+2:lemma:0.3'
-0.160548 O        b'lemma:methanol'
-0.160548 O        b'word:methanol'
-0.160548 O        b'-2:lemma:dissolve'
-0.160950 O        b'-1:lemma:-lrb-'
-0.160950 O        b'-1:word:-LRB-'
-0.161746 Gversion b'hLower'
-0.161809 O        b'-2:lemma:nitrate'
-0.161846 OD       b'+2:postag:RB'
-0.162254 O        b'+1:lemma:nitrate'
-0.162254 O        b'+1:word:nitrate'
-0.162431 O        b'+1:lemma:until'
-0.162431 O        b'+1:word:until'
-0.163605 O        b'postag:JJ'
-0.163801 O        b'+1:lemma:10'
-0.163801 O        b'+1:word:10'
-0.164136 Air      b'+2:lemma:70'
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-0.165526 O        b'+2:lemma:fnr'
-0.167848 Technique b'-2:postag:NN'
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-0.170244 O        b'+1:word:%'
-0.170339 Supp     b'+2:postag:-RRB-'
-0.177182 Air      b'postag:CD'
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-0.177483 O        b'word:CO2'
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-0.197341 Temp     b'+1:lemma:with'
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-0.514256 O        b'-2:lemma:rifampicin'
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-2.212321 O        b'-1:lemma::'
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-2.322037 Technique b'symb'
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