SRR933985	GSE48829	GSM1185371	GPL17439	PMID_24214998	23C3	Escherichia coli RNA-Seq	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	data_processing	Illumina Casava software used for basecalling. PGCGROWTHCONDITIONS
SRR933985	GSE48829	GSM1185371	GPL17439	PMID_24214998	23C3	Escherichia coli RNA-Seq	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	data_processing	Sequenced reads were trimmed for adaptor sequence, and masked for low-complexity or low-quality sequence, then mapped to Escherichia coli str. K-12 substr. MG1655, complete genome using bowtie2 version 2.0.5 with default parameters. PGCGROWTHCONDITIONS
SRR933985	GSE48829	GSM1185371	GPL17439	PMID_24214998	23C3	Escherichia coli RNA-Seq	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	data_processing	ecoli NC_000913.2 PGCGROWTHCONDITIONS
SRR933985	GSE48829	GSM1185371	GPL17439	PMID_24214998	23C3	Escherichia coli RNA-Seq	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	data_processing	Genome_build: ASM584v1 PGCGROWTHCONDITIONS
SRR933985	GSE48829	GSM1185371	GPL17439	PMID_24214998	23C3	Escherichia coli RNA-Seq	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	data_processing	Supplementary_files_format_and_content: tab-delimited text files include count values for each Sample. PGCGROWTHCONDITIONS
SRR933985	GSE48829	GSM1185371	GPL17439	PMID_24214998	23C3	Escherichia coli RNA-Seq	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	extract_protocol	DNA was extracted in the same manner as described by McNulty et al. (PMID: 22030749). PGCGROWTHCONDITIONS
SRR933985	GSE48829	GSM1185371	GPL17439	PMID_24214998	23C3	Escherichia coli RNA-Seq	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	extract_protocol	RNA libraries were prepared for sequencing using standard Illumina protocols PGCGROWTHCONDITIONS
SRR933985	GSE48829	GSM1185371	GPL17439	PMID_24214998	23C3	Escherichia coli RNA-Seq	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	organism	Escherichia coli str. K-12 substr. MG1655 PGCGROWTHCONDITIONS
SRR933985	GSE48829	GSM1185371	GPL17439	PMID_24214998	23C3	Escherichia coli RNA-Seq	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	source_name	23C3 PGCGROWTHCONDITIONS
SRR933985	GSE48829	GSM1185371	GPL17439	PMID_24214998	23C3	Escherichia coli RNA-Seq	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	library_strategy	RNA-Seq PGCGROWTHCONDITIONS
SRR933985	GSE48829	GSM1185371	GPL17439	PMID_24214998	23C3	Escherichia coli RNA-Seq	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	characteristics	genotype/variation: ydcR (b1439) MUTANT PGCGROWTHCONDITIONS
SRR933985	GSE48829	GSM1185371	GPL17439	PMID_24214998	23C3	Escherichia coli RNA-Seq	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	characteristics	strain: K-12 PGCGROWTHCONDITIONS
SRR933985	GSE48829	GSM1185371	GPL17439	PMID_24214998	23C3	Escherichia coli RNA-Seq	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	organism	Escherichia coli str. K-12 substr. MG1655 PGCGROWTHCONDITIONS
SRR933985	GSE48829	GSM1185371	GPL17439	PMID_24214998	23C3	Escherichia coli RNA-Seq	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	source_name	23C3 PGCGROWTHCONDITIONS
SRR933985	GSE48829	GSM1185371	GPL17439	PMID_24214998	23C3	Escherichia coli RNA-Seq	GPL17439: Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)	contact_name	Kristof,,Engelen PGCGROWTHCONDITIONS